Astyanax mexicanus (Mexican tetra): 103027307
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Entry
103027307 CDS
T05042
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103027307 (clstn3)
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Cadherin related
103027307 (clstn3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103027307
NCBI-ProteinID:
XP_022530024
Ensembl:
ENSAMXG00000033884
LinkDB
All DBs
Position
6:complement(6438017..6501847)
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AA seq
967 aa
AA seq
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MLQAVIPTHLKMARMSLLSILLFCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNP
PLFALDKDAPLHYAGEICGFRVHNGPGGSGAAQFEAVVLDRSTGEGLVRSKEPLDCESQR
EHSFTIQAYDCGEGPDGTNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRI
VRVEALDADCSPQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKKQRVHSFWVTAFDC
GKNRAQADAQVVVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQAT
VELQTGHIGKGCDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTAALPTLPSSDSSLV
FSFNGSTHVAVVPDSIASTVAGDHFTLQLWMRRGGANTQPPANQARGTRKEEETIICSTV
KNDDSYSHYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTL
YVDGVTFDPALIHDNGAIPNPVPRQRLVIGACWEPEDKQKDILNNSIPEAKDTGKFVGGY
RGLLSGVTVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDI
ESFNRAVQQVTYRNSLRFATPGVRPLKLTTSLRCFSEESCLSLRQLEGYLVVLQPDAPQI
SLSGVGPHLARPAPEFEGARGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLD
GCEVQPLGEELNPEKEELLVDMESLKEKGLDIINTTAYIAITGAESISVYEDVLRSIRYR
LAKGSARFERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHH
TGELSGHTLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGGGKE
GSNQWDDSALTIIVNPMESYENRMGMAADTEGEGDDEDDVVESPDDTGDDQRIIIKKEGR
DSAPRRY
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggctgtcatccccacacatctcaagatggccagaatgagtttgctctccatt
ctcctcttttgcttgacttccgttgctaatggcaacaaagccaataagcacaagccatgg
atcgagacggaatatcagggcattgtcatggaaaatgacaacacggttctgctcaacccc
cctctatttgccctggataaggacgcccctctgcactatgcaggtgaaatctgtgggttc
cgtgttcacaacggcccgggaggttctggagcagcccagtttgaggcggtggtgttggac
cgctccaccggagagggcctggttcgctccaaagagcctctggactgtgagagtcagagg
gagcacagcttcaccatccaggcctacgactgtggagagggacccgacggcaccaacagc
aagaaatcacacaaggcgacggttcatgtgcgtgtgaatgatgtgaacgagttctctccg
gtgttcgtggagcgccggtatgaagcgtccgtacccgagggtcgcctgttcgaccgtatt
gtccgtgtcgaagctctggacgctgactgctcacctcagtacagccagatttgcttctat
gacatcatcacccccaatgttccctttgccattgacaacgacgggaacattaagaacact
gagcctctggactcgaagaagcagcgtgttcacagtttctgggtgactgcgttcgactgt
gggaagaatcgagctcaagctgacgctcaggtcgtcgttaccgtcaaaccctcctgcaaa
cctggctggataggctggtcaaaacgagtggaatacacacctggttctggaagcatcccc
ctctttcccagtctgcacctggagacgtgtgaggagacggtgtggaacatccaggccaca
gtggagctccagacggggcacattgggaaaggctgtgatcgggacagttactcggaccgc
tctgtgaggaggctctgtggtgccgttaggggtgaggtggacctgctcccgcccccgtct
cctgcagccaactggacggcggctctcccgaccctgccctcctctgattcgtcactggtc
ttctccttcaatggctccacccacgtcgccgtggtgccagactccatcgcctccacggtg
gcaggggaccacttcaccctccagctgtggatgaggaggggtggagctaacactcagcca
ccagctaatcaggcgagaggaacccgtaaagaagaagagacgatcatctgcagcacagtg
aagaacgatgactcgtattcgcactattcgctgtccgtgcacggctgccgcctctctctc
ttctattggccggacgtgtcggctgcacgacccgtcaaattcctgtggaagctggagcag
gtttgcgacagcgagtggcatcacctgtctctcagcgtacagttcccctccgtcacactt
tacgtagacggcgtgacttttgaccccgcgctcatccacgataacggagccatccctaac
cccgtcccccgccagcggctggtcattggcgcctgctgggagccggaggataagcagaaa
gacattctaaacaacagcatcccagaggccaaggacacagggaagtttgtgggtggatac
cggggcttgctgtcaggggtaacggtgcgccctggaagcgttgagccccacagtgtggtg
gagtgtctgtacgcctgcagggagggactggatttcggagacctggagacactgggctct
gggatgaaggtacatgtgaaccccagccagtcggttctggttttggagggagacgacatc
gaaagctttaatcgagccgtgcagcaggtcacctacagaaactccctacgcttcgccaca
cctggagtccgccctctgaaactcaccacctccctcaggtgcttcagtgaggagagctgt
ctctctctgaggcagctagagggttacttggtggttctccagcctgacgctccccagatc
tctctctcaggcgtgggaccccacctggcccggccggccccggagttcgagggtgcgcgt
ggagtccccctgttccctgagctccggatcgtctgctctctctctcacgccgtcaacaca
gccgcccagggcatggaaggtggggcgctcatgtccgacgccgtggcccacactcttgac
ggctgtgaggtccagcctctgggggaggagctaaacccagagaaggaggagcttctggtt
gacatggagtctctgaaagagaaagggctggacatcatcaacacgacggcctacatcgcc
atcactggggcggagtctatatcagtgtacgaggacgtcctgcgctctattcgctaccga
ctagcaaagggctccgcccgcttcgagaggagattccggctgtcctgttcagaaatgaat
ggacgctacaccagtaatgagctcacgctggaggtgaatttcctgcactctcttgacagc
ctgtatcacccctcacacctgctggcctcccagcagcagttcctccacccgtcccatcac
acaggagagctgagcggacacacactgcccaatccacaccgcaactctgtagtcccgggg
gccgcaaccgtcatcatcatggtgtgtgttgggttcctggtcgtgatggtgatcctcggc
gtgttccgcatccgctccatccatcgccgtggggagggagccaggggcggcggcaaagag
ggaagcaaccaatgggacgactcagccctcaccatcatcgtcaaccccatggagtcctat
gagaaccgcatgggcatggcggcagatacagagggcgagggcgacgacgaagacgatgtg
gtggagtctcctgatgacacgggtgacgaccagcgaatcatcatcaagaaagaaggaaga
gactccgcccctcgtcgctactga
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