Astyanax mexicanus (Mexican tetra): 103027311
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Entry
103027311 CDS
T05042
Symbol
xrcc3
Name
(RefSeq) DNA repair protein XRCC3 isoform X1
KO
K10880
DNA-repair protein XRCC3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103027311 (xrcc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103027311 (xrcc3)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
103027311 (xrcc3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
RNA_pol_A_CTD
DnaB_C
RecA
AAA_22
GM130_C
Motif
Other DBs
NCBI-GeneID:
103027311
NCBI-ProteinID:
XP_007230987
Ensembl:
ENSAMXG00000020479
UniProt:
A0A8B9LR86
W5LMM3
LinkDB
All DBs
Position
1:69567493..69572415
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AA seq
356 aa
AA seq
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MDLEQLELSPRVRNALRKACVRSVREVLSVSAPELQHRLALLSLREVKELHAAAAAACRS
SPPVTALQLARGECPSLEPGHRLSLACPVLDNLLRGGLPLRGITELAGESAAGKTQFALQ
LCLSVQYPQEHGGLGSGAVYICTEDSFPIKRLRQLITQQARLRPNVPQALIRSLRFSDNI
YIEHTADLEALQACVSQRVPMLLERGLVRLVVVDSVAALFRTEFQADEAIERARHLLAFS
STLHRLSHTHAAPVFCINQVSDVVDGPNPGRCDYGLVDSKVQPALGIAWANQVMVRLMLW
RQEGCLRSGGRTSAPRRLEVVFAPHLPRASCLCGVWEEGVRAIPDEDLGEELQTTS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacttggaacagcttgagctcagtccaagagtcaggaatgctctgagaaaggcctgt
gtgagatcggtgagggaggtgctgagtgtttctgctccggagctgcagcacagactcgct
ctcctgtctctgagggaggtgaaggagctgcatgctgctgccgccgctgcctgtaggagc
tcaccacccgtcacagctttacagttggctcgtggagaatgtccttccttggaacccgga
cacagactttcgctggcctgtcctgttttggataatcttttgcggggtggtcttcctctg
cgtggaataacagagctagcaggtgagagtgctgctggaaaaacccagtttgcactgcag
ctttgcctctctgtccagtatccacaggaacatgggggactgggatcaggagctgtttat
atctgcactgaagattcttttcccattaaacggctgcggcaactcattacccagcaggcc
cgactccgcccaaatgtgccacaggctctgatccgcagcctccgcttcagtgacaatatc
tacatcgagcacactgcagacctggaagctctgcaggcgtgtgtgtcgcagcgggtgccc
atgttactggagagaggtttggtgcgtctggtggtggtggactctgttgctgccctgttc
agaacagagttccaagctgatgaagccattgagagagcacgccacctgctggccttttcc
agcaccctccatcgcctcagccatacgcatgctgcacctgtgttctgcatcaatcaggta
tcagatgttgtggatggtcccaacccaggacgctgtgattatgggctggtagacagtaag
gtgcaacctgctctgggtattgcctgggccaaccaggtgatggtgcgtctcatgctgtgg
aggcaggagggctgtttaaggtcaggaggtcggactagcgctccccgcagactggaggtg
gtttttgctccacacctaccccgggccagctgcctgtgtggagtatgggaagaaggagtc
agagcaattcctgatgaagacctcggtgaagagcttcaaaccacttcatga
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