Astyanax mexicanus (Mexican tetra): 103027380 Help Entry 103027380         CDS       T05042                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:amex04515]     103027380 (dchs1b) Cell adhesion molecules [BR:amex04515]  Cadherins   Cadherin related    103027380 (dchs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Fibulin_C Cadherin_4 Cadherin_pro Big_9 TMEM154 CADH_Y-type_LIR TCL1_MTCP1 RIFIN Motif Other DBs NCBI-GeneID:  103027380 NCBI-ProteinID:  XP_022537165 Ensembl:  ENSAMXG00000008315 LinkDB All DBs Position 20:complement(37841804..38055549) Genome browser AA seq 3296 aa AA seqDB search MTLFKGPRDGICSQLYKKRSWRPRMLLLLLVTLDFLVVSVSAESTPGILELQLDEEQPAG TIVGDISAGLPPGETASLYFISDHEGTGVGSDLNIDETTGIIETARRLDREERDHYSFIA VTMTGLTVEVSITVNDINDHAPVFPKKKASLKIPEQTAVGTKFSLEPATDADKDQLTTQG YLIKEGNVGQVFRLETKRATNKVLYLDLVVNGVLDREKRASYSLLLEAFDGGSPKKTGQM TLDVTVQDINDHAPIFNQSRYHAIISESLPQGSNILQVFASDADEGDNGLVLYEINRRQS DPDRYFVIDPRSGIITLNKPLDYEVRKVHELVVQARDNASHPEITNAFVTIHVRDFNDNQ PTMTIIFLSEDGSPRISEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDS IIYLIYVDQVLDREERDSYELRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYKQ TIPEVVYPGSFVLQVTARDKDHGPNGDVLYSILPDRGTHSDWFTIDPVTGIITTATQLDY ETYPNPSVKVVATDGGKPPLSSTALVEISLQDINDNEPVFGSSVYNVSIKENTAAGTCFL EVTASDADGGSFGAVAYSLGSGAGSSPPTRFSINKETGQICTSAALDRDEGADSFEFTVT AADGGGLSSSAVVKVSLQDINDNRPTFYPVNYAVSLSSQSAPGTSVIRVTAHDPDGGENG KVTYRTVPGEGSNFFTLNKDTGVISLSRSLHGKANSVIAMVITAQDGGGLTAPVNARVNI SVVAGSVAPPVFEQAQYFFTVSEDVLRGTEVGVVRANSRSLATKDISYTISSGDPDGYFT VDSETGALRTSLPLDHEARPSLELEVQASSGSPPAFGQTRVTITIGDVNDNTPAFLPSSS ESLLLPEVTKIGSVVYRVQAEDRDSGQNGRISFHLLASGGQRAFSVERGSGEIRLISSLS YDSVPRYDLQVLARDGGVPQRSATFTLVVHVQAEDDQGPAFDTLTYRVELKENTPLNTRF LQVRALSRDQAANGANGGNGGSSPAALLSYRLRPDGDAAGFGIVPDSGWLFVKSALDREA KDIYLLTVLATSGSGRMKKTGSATVRVSVTDENDNSPRLSQERVFLAVRENLPTGTGFGR VSATDRDAGLNSRLTYRLLHTDRNFQINSQTGEISTRAALDREHQSSYQLVVVVQDGGTP PRSATGTAHITVLDENDNAPIFSHMMPGKELLIQVQEGLPAGSLLGTLQAKDPDEGENST IFYSLSGSRAERFSLNPNTGELRSSSPLRRAEKSEYSITVSASDRGAPPQSSSCVLRIQI LGSSRAAPKPNTLSMTLNSVEGAKPGSVIGSVRSHDHRDVVLDGQVTYLVVGGTDKDGTF MVDRLTGDVYLARELDYEKGALYTLNIEVEDFSKAYPSTYMIQLDITVQDSNDHAPEFPE DPVTIVVPENMQPGSSIYTFQAADKDGSGPNSEVRYSIQHRYPDRSDLLTLDPISGVLTL GQALDHEETSSLFLVVRGTDSAVDPNQRRWGSVTARIFVTDENDNAPIFSSPTAVSVMED QPVGFVLLYVMARDADQGENGRVSYRIQTGNAGGRFSLNPNTGSLSILKAMDREEQDSYN LTIIAEDHGTPQHSTTQVLSVQVIDVNDEAPWFEKSEYEVQVRENQPAGTTVLTVSATDR DQGTNGRVTYGDVTVDGFIIAPETGVISLTKVLDREQQDHYTVTVYAKDGGMPPNFAKAT VHITVLDENDNAPVFGRLQYSLELPENLEPVELFIIKATDQDSGDSGHLEYRITVGDPDG DFQLDSSSGALSTSRPLDRERRDSYSLEVVAQDRGTPSLSSTATVEITVLDVNDNSPTFT SSSYTVDVSEDAAVGSSLLDVTAKDADEGQNGQILYFLSSEARGDFTVDPDTGRIVTAAP LDREKRASYSFQVCAVDLSPATPRNTTAQVTVTILDVNDNAPFFIQDPLIINVSSRSVAT NHVVATMKAEDKDFGANGSVFYRFAMPVRGFSINSLTGEIQTTELLSSLTQSQRTLIVEA MDQGSPAQSSLGVVIIYVKEQDYQGIRFSRTTRDVSIQENAAKGTTVAQAQAQYPDGTRG GITYSIFSGNRQLSFRISSSTGEIWVHSSTGLDFEDTPRLRLVVKAETASSSSFMAVNLI LQDVNDNLPRFQLQNYVAYMREARGYDSPIIQVVAEDVDQGPNGQVTYSIQSSGRSGLFK IDPLSGSITTAAIMDREIWMQTKLVITATDRGSPKLAGSATLTVIIVDLNDNSPTIPLPR EVRVPENSLIGTEITMVTGNDVDSGPVLSYSLRLDTPSQGKFGIHRYSGRVFLTAPLDFE ERSWYTLTVQASDSKHQSEANVTVLVGDMNDNVPTFTQDLYQVTLPEHSPPGSAVVTVTA TDRDSGENGRVTYRVLSSSREGFYIDPNNGTLFIGQKAEFDPERPSVSVVIEASDRGKPP LSSIATVQIQLTDVNDNAPMFHQSEYRATVSEDQLPGATILTLEAVDVDLSQENSGFDFA IASGNVGNAFQIESSVRFIEGHGFQTVGTLILAEQLDFELMSRYNLTIVVSDRGVPQRSS SVPAVITVIDVNDNPPVFSHAEYVVALSEGAAAGTEILRLSATDQDSAPHAEIQYSISSG DEMELFSVDQWTGALRLQRPLDRETQPSHVVIIQASDGHGHFALAPINVEVKDVNDNRPY FPIQTMTASIRENQPANSAVTVLHAIDQDTGMYGILKYFMVDRSSQGKEFFAVDQNTGEV RSRQAFDFEKVNSFHFMALAVDAGNNSATVTVQVYITGEDEYDPAFTSSALSFEVPEGAK KGQSIGQVQAVDEDGGVDGIVLYSFPNTSPYFDVNKTTGVIYLKIDNSGSSGGGSRSKRE TRLMTMDVTAHSPLESSRVTTAQLTIDVTNTSFGLATDFNILLVIIIAASLGVIVILVII AVALYLVKSKRKKKGQNTGTVDSGTALQQLDESKSAGGERIYHQTLPGYAGDQGGGGGSY TRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDADQ LSDISCEPGALDASQWFKGKKLGSASGTMLSGTLPIYRDEGGGYLGVGRGLNISHPKDYA FPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDESIPPN NPRRPFQPKAKTDPKPRIDPPPLITSVAHPGAKSVPPKPAMARTFPHLASLRRSPISHEG SISSAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSASIISTTEHSLEHSDEAEMRI NT seq 9891 nt NT seq  +upstreamnt  +downstreamnt atgacgttattcaaaggccccagggacggtatatgtagtcaactttacaagaaaagaagc tggagaccgaggatgttactgcttttgcttgtgactttggactttttagtagtatctgtc agtgctgaatcaacgccaggcatactggagttacagctggatgaagaacagcccgctggg acaatagttggtgacattagtgcgggattaccgcctggagaaactgcctctctctacttc atctctgaccatgaaggcaccggtgtggggagcgatctcaatatcgatgagaccaccggc atcatcgagactgctcggcgcctggaccgagaggagagggatcattatagcttcatcgct gtcactatgaccggtcttacggtggaggtctccatcacggtcaatgatatcaacgatcac gctccagtcttccccaagaagaaggcttccctgaagatccctgaacagactgccgtaggg accaagttctccctcgagccagcaactgatgcagacaaagatcagcttaccacccagggc tatctcatcaaagaaggcaatgtcggacaagtgttcaggctggaaaccaagagagcaacc aacaaagttctttacctggacctggtagtgaatggagtccttgatcgagaaaaaagggct tcttattccttgcttctggaggcttttgatgggggatctcctaagaaaactgggcaaatg actcttgacgtcaccgtgcaggatataaacgaccatgctcccatttttaatcaaagcaga taccatgccatcatctcggaaagcctccctcagggtagcaatatccttcaagtgtttgcc tcggatgcagatgaaggcgacaatggccttgtgctctacgagatcaatcgccggcagagt gatccagacagatacttcgttattgaccctcggtcaggaataatcacactcaacaagcct ttggactatgaagtaaggaaggtccacgagctggtagtgcaggcgagagacaatgccagc cacccagagatcacaaatgccttcgtcactattcacgtccgagacttcaatgacaaccag ccaactatgaccatcattttcctcagcgaggatggatctccacgaatatccgagggtgcc cagcctgggcagtacgtcgcccggatctcggtctctgaccctgactatggtgaatattcc aacgtcaatgtctctctggaaggtggagatggcaagttcgccctcaccaccaaggacagc atcatctacctcatctacgtggaccaggttctggatcgtgaagaaagggactcgtacgag cttcgtgtcatggctacagactctggcaccccaccactccgagccgaatcgtccttcaca atccaagtaacagatgtcaatgataaccctcctctctttgaccagcaggcgtacaagcaa accattccagaggtggtttatccaggcagctttgtgctacaagtgacagcaagagacaaa gaccacggccccaatggcgatgtactctacagcatcttgcctgacaggggcacacattct gattggttcaccattgacccagtgacagggatcatcactacagctactcagctggattac gaaacataccccaaccccagtgtcaaggtggtcgctacagatggtggaaagccccccttg tcctccactgccctggtggaaatcagcctacaggatattaacgacaacgagccagtcttt ggaagcagcgtctacaatgtgtccatcaaggagaacacagctgccgggacctgtttcctc gaggtgacggcgagtgacgctgatgggggctcctttggtgctgtagcgtattctttggga tcaggagcaggcagttctcctcccacacgcttcagcatcaataaagagacgggtcagatc tgcaccagtgctgcgctggaccgagacgaaggagccgacagctttgagtttactgtcact gctgctgacgggggtggtctgagctcttcagcggttgtgaaagtgtctctgcaggacatc aatgataacaggcccaccttctacccggtgaactacgcagtcagcctgagctctcagagt gcccccggaacctccgtcatcagggtaacggctcacgacccagacggaggagagaacggg aaagtgacgtaccgcactgtacctggagaaggctcgaacttcttcaccctcaacaaggac acaggggtgatctctctgtcccgctcgctgcatggaaaggccaactctgtcatcgccatg gtgatcacggcgcaggacggcggtgggctcacggctccggttaacgccagagtgaacatc agcgtggtggccggctctgtggcgccccctgtgtttgagcaggctcagtacttcttcacc gtctctgaggacgttctgagagggacggaggtcggggtggtgagggctaacagcaggagc ctagccaccaaggacatctcctacaccatctcctctggtgatcctgacggttatttcact gtagactctgagacaggggctctacgcaccagcctgccgctggaccacgaggctcgcccc tctctggagctggaggtccaggccagcagcggctctcctcccgccttcggacagacgaga gtcaccatcaccatcggcgacgtcaatgacaacacccccgctttcctgccctcctcctcc gagtccctactgctacccgaggtcactaagatcggctcggtggtctaccgcgtccaggca gaggaccgtgactcgggacagaacggccggatcagcttccatctgctggcgtctggaggt cagcgggcgttcagcgtggagcgcggcagcggagagatccgcctgatctccagcctgtcc tacgacagcgtcccgcgctacgacctgcaggtgctggcccgggacggcggggtcccgcag cgcagcgccaccttcaccctggtggtccacgttcaggccgaggacgaccagggtcccgcc ttcgacaccctgacctaccgcgtggagctgaaggaaaacacgcccctcaacactcgcttc ctgcaggttagagctctcagcagagaccaggccgcaaacggagccaacggaggaaacgga ggttcttctcccgctgcgctgctttcttaccgcctccggcccgacggggacgcagccgga ttcggcatcgttccggacagcggatggctgttcgtgaagagcgctctggaccgggaggcc aaagacatctacctgctgaccgtactggccacctcaggaagtggacggatgaagaaaaca ggcagtgccacggtaagagtgtccgtcacagatgaaaacgacaactccccccgcctctcc caggagagggtcttcctcgcagtgagggagaacctgcccaccggaactggattcggcagg gtttcggctacggaccgggatgctggactcaacagccgcctcacgtacagactgctgcac actgaccgcaacttccagatcaactcccagactggtgagatcagcaccagggcagcactg gatcgtgagcaccagtccagctaccagttggtggtggtagtgcaggacggaggcacgccc ccacgcagcgctaccggcaccgcccacatcaccgtgctggacgagaacgacaacgccccc atctttagccacatgatgccgggcaaagagttgctgatccaggtgcaggaaggtctgcct gctggctctctgctgggaacactgcaggctaaagacccagatgagggagagaatagcacc atattctactcattgtctggctccagagcagagcgcttctctttgaacccgaatacagga gagctgagatcttcttctccactgagacgagcagagaaatctgagtacagtattactgtc agcgcttctgatcgcggtgctccacctcagagctcgtcctgcgtcctgcgcatacagatt cttggatcttctagagctgctcccaaacccaacactctgtccatgactcttaactcggtc gagggagccaaaccaggctccgtcattggttcagtacggtcacatgaccaccgtgacgtg gtacttgacggacaggtgacgtaccttgtagtgggtggcacggataaggatgggaccttc atggttgaccggctgacgggagatgtgtacttggccagggagctggactatgagaaagga gctctgtatacgttaaatatcgaggtggaggacttctcgaaggcctatcccagcacctat atgatccagctggacatcacagtgcaggatagcaatgaccacgccccagagtttcctgaa gaccctgtgaccatcgtggttcctgagaacatgcagccaggctcctcaatctacaccttc caggctgctgataaggatggcagtgggcccaacagcgaggtgcgctactccatccagcat cgctatccagaccgctcagacctcctgaccctcgaccccatctctggagtgctgaccctg ggtcaggcactggatcacgaggagacctccagtctcttcctggtggttcgaggtacagac tctgcagtggacccaaaccagaggcgttggggctcggtcaccgcccgcatctttgtgacg gacgagaacgacaatgctcccatcttcagctcccccactgcagtcagcgtgatggaggat cagcccgtgggcttcgtgctcctctacgtgatggctcgtgatgctgaccagggtgaaaac ggacgagtttcctaccgtatccagacaggaaatgcaggaggccgcttcagcctcaacccc aatactggttctctgtccatcctcaaagccatggatcgagaggagcaggacagctataat ctgactatcattgctgaggatcacgggaccccgcagcactccaccactcaggtgctgtca gtgcaggtgattgatgtgaatgatgaagctccgtggttcgagaagagcgagtacgaggtt caggtcagagagaaccagccagctggaaccaccgtactcaccgtatctgctaccgacaga gaccagggcactaatggacgtgtaacatatggagatgtgacagtagacggctttatcatc gctcctgagaccggcgtcatttccctcactaaagtgctggacagagagcagcaggatcac tacactgtaacggtgtatgccaaggatggagggatgccccctaactttgccaaggccacg gtgcacatcacagtcctggatgagaacgataacgctccagtgttcgggaggctccagtac agtctcgagctgccagagaaccttgaacctgtagagctttttatcatcaaagctaccgat caagacagcggagacagcggccatctggagtacaggataactgttggagatccagacgga gacttccagctagacagcagttcaggagctttgtccacttctcgacctctggaccgagaa agacgggacagttattctttagaagtggtcgcccaagaccgtgggaccccctccctcagc agcacagccacggtagagatcaccgtcctggacgtcaacgacaacagccccaccttcact agcagcagttacactgtagatgtttcagaagacgctgctgttgggtcgtcactgctggac gtgacggctaaagatgcagacgagggtcagaacggtcagatcttgtactttctgagcagt gaagctcgaggagacttcacagtggaccctgacacaggtaggatcgtcaccgcagcacca ctggacagagagaaaagagcctcctacagcttccaggtgtgcgctgtcgacctgtccccg gccacgccccgcaacaccacggcccaggtcacggtcaccatcctagacgtgaacgacaac gcccccttcttcatccaggaccctctcatcatcaacgtgtccagcaggagtgtggccacc aaccatgtggtggccaccatgaaggctgaagataaagattttggggccaacggctccgtg ttctaccgtttcgccatgccagtacgaggcttctccattaactctctgactggagagatc cagaccacagagctgttgagcagcttgacccagagtcagcgcaccctcattgtggaagcc atggaccagggaagtccagcacagtcctccctgggcgtggtcatcatctacgtgaaggag caagactaccagggcatccgattttcgcgtaccaccagagatgtcagcatccaggagaac gcagccaaaggtaccacagtggcccaggcccaggcgcagtacccagacggcacccgcggg ggcatcacgtacagcatcttcagcgggaacagacagctgtccttcagaatcagctccagc acgggtgagatctgggttcacagctccactgggctggattttgaagacacgccaagactc cgcctagtggtaaaggctgaaactgccagttccagctccttcatggctgtgaacctcatt cttcaggacgtcaatgacaacctgccccgctttcagctgcagaactacgtggcgtacatg cgtgaggcgcggggatacgactcgcctattattcaggttgtagccgaggatgtggatcaa ggccctaacgggcaggtcacctactccatccagtcctccggccgcagcggcctatttaag attgaccctctgagcggcagcatcaccacagcagccatcatggaccgggagatctggatg cagaccaagctagtgatcacagctacagaccgtggcagccctaaactcgctggttctgct actctaactgtcatcattgtggacctcaacgacaacagccccaccatccccctgccgaga gaagtgcgcgtgccagaaaactcgcttatcggcacagagatcaccatggtaacggggaac gacgtggactcgggcccagtgctgtcttattccctgcgtctggacacgccctctcagggc aagtttggaatccaccgctatagcggcagggtgtttctgacggctccgctggactttgag gagaggagctggtacactctgaccgttcaggcttcagactcaaagcatcaaagcgaggcc aacgtcacagtgctggtgggagacatgaacgacaacgtgccgaccttcacacaagacctg tatcaggtgacactgccagaacattctcctccaggcagtgctgtagtcactgtaacggcc acagacagagactctggagagaacgggagggtcacttatcgagtgctgtcgtcatccagg gagggcttctacattgaccccaataacggcacactattcatcggtcaaaaagctgagttt gacccagagcgtccctctgtaagtgtggtaattgaggccagtgacagaggaaagccaccc ctgtcctccattgccaccgtccagatccagctcacggatgtaaacgacaacgcccccatg tttcatcagtccgaatacagagccacagtatccgaggaccagcttccaggggccacaatc ctgacgctggaagcagtagatgtcgacctctcacaagaaaactcaggcttcgatttcgcc atcgcaagtgggaatgtcgggaatgccttccagattgaaagtagtgtccgttttatagaa ggccacggcttccagacagtaggcacactgatcctggcagaacagctggactttgagtta atgtctcgctacaacctcaccatcgtggtttcggaccgtggcgttccccagcgcagctct agtgtccctgctgtcatcacagtgattgacgtcaatgacaaccctcctgtgttcagccat gctgagtatgtagtggctctgagtgaaggggctgcagccggcacggagatcctacggctg tctgcaactgatcaagattcggcaccccacgcagagatccagtacagcataagctctgga gatgagatggaactgttctctgtagaccagtggactggagcattgcgactgcagagacct ctggaccgggaaactcaaccttcccatgtagtcatcattcaggcttcggacggtcatgga cactttgcccttgctccaatcaatgtggaggtgaaggacgtcaacgataacagaccttac tttccaatccagaccatgactgcaagcattcgagagaatcaacctgcgaattcagcagtc acagtgttgcacgccattgaccaggacactggaatgtacggaattttgaaatatttcatg gtggaccggtctagtcaaggcaaagaattcttcgcagtggaccagaacacaggagaggtc cgttctcgtcaagcatttgactttgaaaaggtgaactccttccatttcatggctttagct gtggatgcaggcaacaattctgccacagtcactgtacaagtctacatcaccggcgaggat gagtatgaccctgccttcacctcctcagccctctcctttgaggtgccagaaggggccaag aaaggccagagtattggtcaagtgcaggcggtcgatgaagatggtggagtagatgggatt gtactgtactcttttccaaacacttccccatactttgatgtgaacaagaccactggtgtc atctacctcaaaatcgataactctggaagctctggcggaggaagtcgctctaaaagggaa acacgccttatgaccatggatgttacggcgcacagtcccttagaatcctcaagagtcaca actgcccagctaaccatcgatgtcaccaacacatctttcggacttgcgactgactttaac attctcttggtcatcatcattgcagcttctcttggtgtaatcgttattctggtcataatt gcagtggcgctgtatcttgtcaagtccaagcgcaagaagaaagggcagaacactgggact gtggattcagggactgcgctacagcagttggacgaatctaaatctgctggtggggagaga atctatcaccagacccttccaggttatgctggcgatcagggaggaggtggaggttcatac accagaggcggctcattggatccatcgcactccagtggcaggggatcagccgaagctgcg gaggacgatgagatccggatgataaacgagtatccacgagtggccagcatcacgtcttcc atgcaagagcacatttcagcccgtggacctgactctggcatccagcaagacgcagaccaa ctctctgacatttcctgtgaaccaggggcactggacgccagccaatggttcaaaggaaag aaactggggagtgcaagtggcacaatgctgtctggcacacttccaatatacagagatgaa ggtggtggctatctaggagtgggcagaggcctgaacatatctcatcctaaggattatgct tttcctgaagatggcaaaccttcagtagatggctccctcacagccatcgtcgcaagtgac gaggagttgcgcggcagctacaactgggactaccttctcaactggtgcccacagttccaa ccccttgcgaatgtctttacagaaattgccagactgaaagatgagagtataccccccaac aacccacggcgacccttccaaccgaaagccaagacagatcccaaacccagaattgatcca ccccctcttattacctcagtcgctcacccaggcgccaagtctgttccaccgaagcctgcc atggcaagaacttttccgcatctagcgtcccttaggcgctccccaatcagccacgagggt tccatctcctcagcagccatgtccccaagcttctccccttccctgtccccacttgcagcc cgatcacccgccgtgtccccgtttggggtcacgcaaggcccctcagcctccattattagc accacagagcactcgttggagcacagtgatgaagcagagatgagaatctaa

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