Astyanax mexicanus (Mexican tetra): 103027419
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Entry
103027419 CDS
T05042
Symbol
dpf1
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein neuro-d4
KO
K22198
zinc finger protein neuro-d4/cer-d4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103027419 (dpf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103027419 (dpf1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103027419 (dpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf-C2H2
zf_RING_Vps8
PHD_2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
103027419
NCBI-ProteinID:
XP_049323115
Ensembl:
ENSAMXG00000007613
LinkDB
All DBs
Position
18:32315608..32424085
Genome browser
AA seq
411 aa
AA seq
DB search
MNESGIAYILGRFMSNAGDLQPYILSFYINMATAVQNPLKSQSSGTVIKNSLGEEFYRDA
IEHCRSYNARLCAERSMRLPFLDSQTGVAQSNCYIWMEKNHRGPGVAPGQLYTYPARCWR
KKKRLNILDDPRLGPIEFKIDYEAALKKEGGVPEGPVLESLLSGEPLDKKVETKEEEAMS
ECQKLLVGDFPHELDIEEMEEDVPKRKNRTKGRACGVGGMRKRQDPASIEDRDKPYVCDI
CGKRYKNRPGLSYHYTHTHLADEEGEEDSERHTLPFQRKNNHKPKKAADGSVIPNGYCDF
CLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEN
DDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRQLKEKASAYITLT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagtggaatagcttatatattgggacgcttcatgtccaacgccggggatctg
cagccttacattctatcattctatatcaacatggccacggcagtgcagaacccgctcaaa
tcgcagtcgagtggaaccgtcataaagaacagtctgggcgaggagttttaccgtgatgcg
attgaacactgccgaagctataatgcccgtctgtgtgccgagcgctccatgcgtctgccg
ttcctggactctcaaacgggcgtagcacagagtaactgctacatatggatggagaagaat
cacagaggcccaggtgtggcgccgggtcagctgtacacctacccggctcgctgctggcgc
aagaagaagcggttaaacatcctggatgacccgcggctggggcccatcgagtttaagatc
gactacgaggcagccctgaagaaggaaggcggagttcctgagggtccggttctggagtcc
ctgctcagtggagagccgctggacaaaaaggtggaaaccaaggaggaagaggccatgagc
gagtgtcagaagctgctagttggagacttcccacatgagctggatattgaagaaatggag
gaggacgttcccaagcgcaagaaccgcaccaaaggacgggcctgtggtgttggtggaatg
aggaagagacaggacccggcctccatagaggacagagacaagccgtacgtctgcgacatc
tgcggcaaacgttacaagaaccgcccgggcctgagttaccactacacccatacacaccta
gcggacgaagagggagaggaggactctgaacgccacactcttccattccaacgcaagaac
aaccacaagcccaaaaaagctgcagacggctcggtcatccccaacggttactgtgacttc
tgcctgggaggctccaagaagaccggctgcccggaggacctcatctcctgtgcggactgc
ggccgatcaggccacccgtcctgcctgcagttcacagtcaacatgacggcggcggtgaga
acctaccgctggcagtgcatcgagtgcaagtcctgcagcctctgtggcacctctgagaac
gacgatcaacttttattctgtgatgattgtgaccgagggtaccatatgtactgtctcagc
ccaccaatggcagaacctccagaagggagctggagctgccacctgtgtctccgacagctg
aaggaaaaagcgtctgcctacatcacgctaacctaa
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