Astyanax mexicanus (Mexican tetra): 103027422
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Entry
103027422 CDS
T05042
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103027422 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103027422 (trip13)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
103027422 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_24
AAA_25
ATPase_2
AAA_14
AAA_18
AAA_5
AAA_28
AAA_7
NACHT
KAP_NTPase
AAA_17
TIP49
RNA_helicase
ATPase
Viral_helicase1
DUF815
RuvB_N
NPHP3_N
bpMoxR
Cytidylate_kin
TsaE
IstB_IS21
ABC_tran
AAA_13
Mg_chelatase
AAA_30
AAA_33
Rad17
AAA_11
AAA_19
SLFN-g3_helicase
PduV-EutP
Parvo_NS1
PhoH
NTPase_1
NB-ARC
nSTAND6
Motif
Other DBs
NCBI-GeneID:
103027422
NCBI-ProteinID:
XP_022522142
Ensembl:
ENSAMXG00000020078
LinkDB
All DBs
Position
1:complement(122167405..122182300)
Genome browser
AA seq
431 aa
AA seq
DB search
MMNEDMMEGANQQLSEDSFTDVHIEVHVKSESTVRRAEVRTHILPLLDRHSLVTGSYKWT
EFDDEFLRKNVESIAVVDMDVLSKIDLRTTNLCIHIFSLSDDGPSTLNLEEDEELSAANH
WLLPAAELHGIWESLIYEEDIKTQLLNYVSTAIFFSDKNVDSNLITWNRVVLLYGPPGTG
KTSLCKALAQKLSIRMCGRYAYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKE
ALVFVLIDEVESLTAARNAAQAGTEPSDAVRVVNSVLTQLDQLKRYPNVVILTTSNVTEK
IDSAFLDRADIRMYIGPPGANAIYKIYLSCLEELMKKQVIYPRQQLLSLEELDTMGYIKS
KVTELSLKLHNIAQKSAGLSGRTLRKIPFLAHSLYAKMSVVTVETFLVSMEKAVLQQQKE
REHLNGPERSC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgaagacatgatggaaggcgctaatcagcagctcagtgaggacagcttcact
gatgtgcatatagaagtgcatgtcaagtctgaaagcacagtgagacgagctgaggtgagg
actcatattctgcctctgctggaccgacacagcctggtgaccgggtcctacaagtggacg
gagtttgatgacgaattcctgaggaaaaatgttgagtcgattgctgtggtggacatggat
gtactctcgaaaattgatctgaggacgactaatctatgcattcacatcttctctctgagc
gatgacggacccagtacactcaacctggaggaagacgaggagctctccgcagccaatcac
tggcttctcccagcagccgagcttcacggtatttgggaaagcttgatttatgaagaagat
atcaaaacacaactcttgaattatgtctcaacagcgattttcttttctgacaaaaacgtt
gacagcaatctcattacgtggaatcgggttgtgttgctttatggtcctccaggcacggga
aagacgtccttatgtaaagcacttgctcagaaactctcgatcaggatgtgcggaagatac
gcgtacggacagttcgtggaaatcaacagccacagtctgttttcaaagtggttctcagag
agcggtaaactcgtcacgaagatgttccagaagattcaggaactgatcgatgataaagag
gctcttgtctttgtgcttattgatgaggtagagagtctgacggcagcgagaaacgccgct
caggctggaactgagccttcagacgctgtccgggtcgtcaactccgtcctcactcaactg
gaccaactgaaacgatatccgaatgtcgtgattctcactacctccaacgtgacggaaaag
atcgactcagcctttttggacagagcagacataaggatgtatatcggccctccgggtgca
aacgccatctacaagatatacctgtcctgtctggaggagctcatgaagaaacaggtaatt
tacccgaggcagcagctgctgagcctggaagagctggacaccatgggttacatcaagagc
aaagtgacggagctcagcctgaaattgcacaatatcgcacagaagagcgcagggctgagt
ggacggactctgaggaaaatcccttttctggctcattctctttatgcaaagatgtctgtg
gtgactgtggaaacatttctggtctcaatggaaaaagctgtccttcagcaacaaaaggaa
agggagcatctgaatggccctgagaggagctgctga
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integrated database retrieval system
