Astyanax mexicanus (Mexican tetra): 103027455
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Entry
103027455 CDS
T05042
Symbol
als2a
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103027455 (als2a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
103027455 (als2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
MORN
RCC1_2
VPS9
Alsin_RLD
PH_alsin
HA_Alsin
PH
Motif
Other DBs
NCBI-GeneID:
103027455
NCBI-ProteinID:
XP_049340539
Ensembl:
ENSAMXG00000001685
LinkDB
All DBs
Position
11:35963136..35995289
Genome browser
AA seq
1695 aa
AA seq
DB search
MEGQKSSEEDEASQKRGVLYKWQGYSCTVNPEKVLLPRPVLQAALGINHGVLLTEGGLVY
SFGEQPWKQDVRSQAGDPVLESSLKDLLVVCVSAGSFHCGAITEDGGVHMWGENSNGQCG
VSGLSLVPNPTRVSIVDNETGPPEHVWTLDVACGAQHTIALSGKHEVWAWGTGCQLGLVT
NVFPVWKPQKVEHLSGRYVVQIACGGFHSLALVRSLPPPGSHHQCMDKCGQCKQQRYTMI
DKDDHVIISDSHYCPLGVELTDAKQDQKSKQGSPALTPKTDLSDLGFSEDFCPSQKALDG
SYQEDTEVKKEELRNEPSSVSMTDSSKAPQQHLTKLRTKSSPYPDEQALKDYLKRMSDQS
VTEHFETLSMAGSRPPSRQTSLKDPYRLDQSDKPTFPSLVKLSTSNSFELSDFAPVTSQD
NTPHSLINSPIGQATSPMEDSVCDSLHNDSDNNEVVSPSDPITTNDSEEDTCDTGLVPLR
NHLYPDESLEAVNSASLIDVRIDFKEEHSRRRSLPTLLTEVSPLVLHRTNLSRNGVSTTS
DGSEKEDLLPSLFTEVWSWGRGQEGQLGHGDVLPRLQPLGIKSLSKMEVVKIVAGSNHSL
AITAQCQVYSWGSSKFGQLGNMNSPSTVPHLVKMSDGIRVWDAAGGQTHTVLLADGDCFQ
PILYYTGEQIQPRADSQTGTYTQTPALLPFCMKIGYVSSVIAGGVNCAALADQNVMGFIA
TLHELASAERKFYCSLSKMKSQILRPLLAQENLKSYLGKISMHLFQKMAGCFSRLCHLTG
QNSTSLTQFLQHSRDVKSLAIVRKAALFLDTYKDYSGPVGNFLVMGGFQALVKPSQECLG
KKLDLIQKLLELKEKNVAPSDLLLNLFYMPLQHLRDYGRLLLKLATCFDVTSVEYQRIQD
GCLQYEVLAHLLSKQRKEAETTHTFWKNFSGKSLESLRKPSRRLVCESGNKGLTLQNAGR
FSVNWFILFNDALVHAQGTIPSKKFFSSHFVYSLATLWVEPFSDESVGLLGLKLTTPEES
FVVLASSPEEKGKWLWAINQAVDDALGIGLDRRGISFSGSQRVEPPISRTATHTFTKEGR
LKDATYIGRWLSGKPNGKGTLKWPDGTIYCGTFKNGLEDGFGDYMMPNKTFNKYDRYKGH
WKEGRMHGFGTFWYATGEVYEGSFQDNQRHGHGMLSSGRLASPSSSSVFIGQWLHDKKNG
YGVFDDITKGEKYMGMWMEDQRQGSGVVVTQFGLYYEGAFSNNKMMGNGLLLCDDDTAFE
GEFSEDWVLNGKGALSMPNGDTFDGIFVGEWGSDLKVAGTFIKPGLYDTEKKENMPLVVG
RYVVPAEQKWRAVFEECWSRLGCETPGQGDNERAWENIAVILTTSRRQQKESVCSPGTLS
RSQCKMLESLEVIPQHVGPVTAETYDTIRRYIVKSCDTPLHPLGWLLETLVTLYRMTYVG
VGSNRRLLQQAVQEIQSYLKRIFELIGFLFPGLPEEGGFISESSGRRPSDSLCSSINSDT
GQQGWIVSSSSLLMPVLLPRLYPPLFMLYTLEREREEEVYWDCVLRLNKQPDLSLLTFLG
VPQKFWPVSISVLGEKKEVLASTKDACFATAVETLQQISTTFTPADKLQVIQLTFEDVTQ
EVQAVLGHDFLWCMDDLFPIFLYIVLRARIRNLGSEVSLIEDLMDPALQHGELGLMFTTL
KACYYQIQNEKTTGI
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacagaaaagctctgaagaggatgaagcctcccaaaagaggggggtgctttac
aagtggcagggttactcttgtaccgttaacccagagaaggtgctcctgcctagacctgtg
cttcaggctgccttggggattaaccatggagttctactaacagaaggtggacttgtctac
agctttggagaacagccatggaagcaagatgtaagaagccaggcaggggaccctgtcttg
gagagctctctgaaggacctgcttgtggtctgtgtgtctgcaggcagcttccactgtggg
gctatcacagaagatggtggggttcacatgtggggtgagaactccaatggccagtgcggt
gtctctggtttgagcttagtgcctaatcctacccgtgtcagcatcgtggacaatgaaact
ggtcctccagaacatgtctggaccctggatgtggcatgtggggcccagcacaccatagcc
ctgtcagggaaacatgaggtatgggcgtggggtacaggctgccagctgggcctggtcacc
aacgtattccctgtgtggaagccgcagaaagtagagcatctatcagggaggtacgtggtg
cagattgcctgtggtgggtttcacagcctggctttggttcgctcattaccccctccgggg
tcacatcatcagtgcatggataaatgtggccagtgtaagcagcagcgttacaccatgatt
gacaaggacgaccatgtcattatttctgacagccattactgcccgctaggtgtggaacta
actgatgcaaagcaggatcagaaatctaagcagggatctccagcactgacgccaaaaaca
gatctctcagaccttgggttctctgaagacttctgccccagtcagaaagctttagatgga
tcctaccaagaagacacagaggttaagaaagaagagctccgcaatgaaccatcttctgtg
tccatgactgacagctccaaagctccacagcaacacctcactaaactaagaaccaaaagt
tctccctaccctgacgaacaagctctgaaagactacctcaagaggatgtctgatcagtcc
gttactgagcatttcgagactctctctatggcagggtcacgtcctccaagccgccaaaca
tcacttaaggatccgtacagactggaccagagtgacaaacccacatttccttctttagtc
aaactcagcacaagcaatagttttgaactctcagattttgcaccagtcacttcacaagat
aatacaccacattctttaataaacagcccaattggacaggctacgtctccaatggaggat
tctgtctgtgattccttacataatgactctgacaataatgaggtcgtcagtcctagtgac
cctataactactaacgatagcgaggaggacacctgtgacacaggcttggtgcctctgaga
aatcatctgtatccagatgagtctttagaggctgtaaacagtgccagcctcattgacgtt
aggattgatttcaaggaggaacatagtcgcagaagatctttaccaactctactcacagaa
gtatccccattggttttacatcggacaaacctttccagaaatggggtcagtacaacctca
gatggctctgaaaaggaggatcttcttccttctctgtttacagaggtgtggagttggggt
aggggtcaagagggtcagctgggtcatggagacgtcttgcccaggttgcaaccacttggc
atcaagagcttgagcaaaatggaagttgttaagattgttgctggatcaaatcactccctg
gccataacagctcagtgtcaggtttactcttggggtagcagtaaatttggtcagttgggt
aatatgaactccccaagcactgtgcctcatcttgtgaagatgtcagacggtattcgagtg
tgggacgcagcagggggacagacccacactgtactgttggctgatggagactgcttccag
cccatcctgtactacactggagagcagattcagccacgagccgactctcaaactggaaca
tacactcagacacctgccctgctgcccttctgcatgaaaattggctatgtgagcagtgta
attgctggaggagtgaactgtgcggctctggctgatcagaatgtgatggggttcattgcc
actttgcacgagctggcgtcagcagagaggaagttctactgctctctgagcaaaatgaag
agccaaatactgcgacccctactggctcaggagaatctcaagtcatatctgggcaaaatc
tccatgcatctgttccagaaaatggcagggtgtttcagtcgactgtgccatctaacgggg
cagaacagcacctctctcacccagttcctgcagcacagcagagatgttaaatcactggct
attgtgagaaaggcagcccttttcttagacacatataaagattacagcggccctgtaggg
aacttccttgtaatgggaggattccaagccctggtgaagccctcacaagaatgtctcggg
aaaaagctggacctgatacagaagctgttggagctcaaagagaaaaatgtggcgcccagt
gatttgctactgaatctgttttacatgccattgcagcacctgcgtgactatggcagactt
cttctgaagctggccacttgctttgatgtgacgtcggtggagtatcaaagaattcaagat
ggctgcttgcagtatgaggtcttggctcatctcctaagcaaacagaggaaagaggcagaa
actactcacaccttttggaagaacttctctggaaagagtttggagtccctgcggaagccg
tctcgtcgtttagtgtgtgagagcggcaataagggcctgacgctacagaacgctggaaga
ttctcagtcaactggttcattctctttaacgatgccttagttcatgcacagggaaccatt
ccatctaagaaatttttctcctctcactttgtttattcgctggcaacactctgggtggaa
cccttctcagacgagtctgttggcctgctggggctgaagctgacgacccctgaagagagc
tttgtggttctggcatcttcccctgaggagaagggaaagtggctatgggccatcaaccag
gctgtggatgatgcattaggaataggccttgataggaggggcattagtttctctggcagt
cagagggtggagcctcctatctcccgcactgccactcataccttcactaaagagggcaga
ctgaaagatgctacatatattggccgctggctctctggtaaacccaatggcaaaggcacc
ctaaagtggcctgatggcacaatatactgtggcacgtttaagaatggcctggaagacggg
tttggtgattatatgatgcccaataaaaccttcaacaagtatgatcgttataagggccac
tggaaggaaggcagaatgcatggctttggaacattctggtatgctacaggtgaagtatat
gagggctcgtttcaggataaccagcgccatggccatggcatgctgagcagcggccgcctg
gcctccccgtcatccagcagcgtgttcattggccaatggcttcatgacaagaaaaacggc
tacggggtctttgatgacattactaaaggagaaaagtacatgggtatgtggatggaggac
cagcgtcaggggagcggtgttgtggtcacccagtttgggctgtattatgagggagccttt
agtaataacaagatgatgggcaatgggcttctgctgtgtgatgatgacactgcttttgaa
ggagagttttcagaggactgggtgctgaatggaaagggagccctgtccatgcctaatgga
gacacttttgatggcatctttgtgggcgaatggggctctgatctgaaagtagctggaact
tttataaagccaggcctttatgatactgagaagaaggagaatatgcccttggtggtcggt
cgttatgtagttcctgcagagcagaagtggagggctgtatttgaggaatgttggagccgg
ctgggttgcgaaactccagggcagggagataacgagagagcctgggagaacatcgcagtc
attctgacaaccagccgcagacagcagaaagaaagtgtgtgcagcccaggtactctgagc
cgctcgcagtgtaagatgctggagagtttggaggtgattcctcagcacgtggggccggta
actgctgaaacctacgacactatccgccgctacatcgtcaagtcatgtgatactccacta
catcctctgggctggctgctggagacgctggtcaccttgtatagaatgacgtatgtaggt
gtgggttcaaacaggaggctcttacagcaggcggtgcaggagatccagtcctatctgaaa
cgcatcttcgaactgatcgggtttttgtttcctggtctgcctgaagaggggggctttatc
tctgaatcctcagggaggaggcccagtgactccctgtgcagcagcattaactctgacacc
gggcaacagggctggatcgttagtagctccagtctgctgatgccagttttgttgcctcgt
ctgtatcctcctctgttcatgctgtacacactggagcgagagcgagaggaggaggtgtac
tgggattgtgtgttacgccttaacaagcagcctgacttgtcccttctcaccttcctggga
gtgcctcagaaattttggccggtctcaatctctgttcttggagagaaaaaagaggtgctg
gctagcactaaagatgcttgctttgctactgcagtggagaccctgcaacagatcagcaca
acgttcactccagcagataaactgcaggtaattcagctgacgtttgaggatgtcacacag
gaagtgcaggctgtgctgggccatgactttttgtggtgtatggatgacctctttcccatc
ttcctctacatagttctgcgtgcacgcatcagaaacctgggctctgaggtgagcctcata
gaggacctgatggatcctgctctacaacatggagaacttggactcatgttcaccactctc
aaagcttgctactaccagattcagaatgagaagactacaggcatctag
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integrated database retrieval system