KEGG   Astyanax mexicanus (Mexican tetra): 103027455
Entry
103027455         CDS       T05042                                 
Symbol
als2a
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103027455 (als2a)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    103027455 (als2a)
SSDB
Motif
Pfam: DH_Alsin WD40_RLD RCC1 MORN RCC1_2 VPS9 Alsin_RLD PH_alsin HA_Alsin PH
Other DBs
NCBI-GeneID: 103027455
NCBI-ProteinID: XP_049340539
Ensembl: ENSAMXG00000001685
LinkDB
Position
11:35963136..35995289
AA seq 1695 aa
MEGQKSSEEDEASQKRGVLYKWQGYSCTVNPEKVLLPRPVLQAALGINHGVLLTEGGLVY
SFGEQPWKQDVRSQAGDPVLESSLKDLLVVCVSAGSFHCGAITEDGGVHMWGENSNGQCG
VSGLSLVPNPTRVSIVDNETGPPEHVWTLDVACGAQHTIALSGKHEVWAWGTGCQLGLVT
NVFPVWKPQKVEHLSGRYVVQIACGGFHSLALVRSLPPPGSHHQCMDKCGQCKQQRYTMI
DKDDHVIISDSHYCPLGVELTDAKQDQKSKQGSPALTPKTDLSDLGFSEDFCPSQKALDG
SYQEDTEVKKEELRNEPSSVSMTDSSKAPQQHLTKLRTKSSPYPDEQALKDYLKRMSDQS
VTEHFETLSMAGSRPPSRQTSLKDPYRLDQSDKPTFPSLVKLSTSNSFELSDFAPVTSQD
NTPHSLINSPIGQATSPMEDSVCDSLHNDSDNNEVVSPSDPITTNDSEEDTCDTGLVPLR
NHLYPDESLEAVNSASLIDVRIDFKEEHSRRRSLPTLLTEVSPLVLHRTNLSRNGVSTTS
DGSEKEDLLPSLFTEVWSWGRGQEGQLGHGDVLPRLQPLGIKSLSKMEVVKIVAGSNHSL
AITAQCQVYSWGSSKFGQLGNMNSPSTVPHLVKMSDGIRVWDAAGGQTHTVLLADGDCFQ
PILYYTGEQIQPRADSQTGTYTQTPALLPFCMKIGYVSSVIAGGVNCAALADQNVMGFIA
TLHELASAERKFYCSLSKMKSQILRPLLAQENLKSYLGKISMHLFQKMAGCFSRLCHLTG
QNSTSLTQFLQHSRDVKSLAIVRKAALFLDTYKDYSGPVGNFLVMGGFQALVKPSQECLG
KKLDLIQKLLELKEKNVAPSDLLLNLFYMPLQHLRDYGRLLLKLATCFDVTSVEYQRIQD
GCLQYEVLAHLLSKQRKEAETTHTFWKNFSGKSLESLRKPSRRLVCESGNKGLTLQNAGR
FSVNWFILFNDALVHAQGTIPSKKFFSSHFVYSLATLWVEPFSDESVGLLGLKLTTPEES
FVVLASSPEEKGKWLWAINQAVDDALGIGLDRRGISFSGSQRVEPPISRTATHTFTKEGR
LKDATYIGRWLSGKPNGKGTLKWPDGTIYCGTFKNGLEDGFGDYMMPNKTFNKYDRYKGH
WKEGRMHGFGTFWYATGEVYEGSFQDNQRHGHGMLSSGRLASPSSSSVFIGQWLHDKKNG
YGVFDDITKGEKYMGMWMEDQRQGSGVVVTQFGLYYEGAFSNNKMMGNGLLLCDDDTAFE
GEFSEDWVLNGKGALSMPNGDTFDGIFVGEWGSDLKVAGTFIKPGLYDTEKKENMPLVVG
RYVVPAEQKWRAVFEECWSRLGCETPGQGDNERAWENIAVILTTSRRQQKESVCSPGTLS
RSQCKMLESLEVIPQHVGPVTAETYDTIRRYIVKSCDTPLHPLGWLLETLVTLYRMTYVG
VGSNRRLLQQAVQEIQSYLKRIFELIGFLFPGLPEEGGFISESSGRRPSDSLCSSINSDT
GQQGWIVSSSSLLMPVLLPRLYPPLFMLYTLEREREEEVYWDCVLRLNKQPDLSLLTFLG
VPQKFWPVSISVLGEKKEVLASTKDACFATAVETLQQISTTFTPADKLQVIQLTFEDVTQ
EVQAVLGHDFLWCMDDLFPIFLYIVLRARIRNLGSEVSLIEDLMDPALQHGELGLMFTTL
KACYYQIQNEKTTGI
NT seq 5088 nt   +upstreamnt  +downstreamnt
atggaaggacagaaaagctctgaagaggatgaagcctcccaaaagaggggggtgctttac
aagtggcagggttactcttgtaccgttaacccagagaaggtgctcctgcctagacctgtg
cttcaggctgccttggggattaaccatggagttctactaacagaaggtggacttgtctac
agctttggagaacagccatggaagcaagatgtaagaagccaggcaggggaccctgtcttg
gagagctctctgaaggacctgcttgtggtctgtgtgtctgcaggcagcttccactgtggg
gctatcacagaagatggtggggttcacatgtggggtgagaactccaatggccagtgcggt
gtctctggtttgagcttagtgcctaatcctacccgtgtcagcatcgtggacaatgaaact
ggtcctccagaacatgtctggaccctggatgtggcatgtggggcccagcacaccatagcc
ctgtcagggaaacatgaggtatgggcgtggggtacaggctgccagctgggcctggtcacc
aacgtattccctgtgtggaagccgcagaaagtagagcatctatcagggaggtacgtggtg
cagattgcctgtggtgggtttcacagcctggctttggttcgctcattaccccctccgggg
tcacatcatcagtgcatggataaatgtggccagtgtaagcagcagcgttacaccatgatt
gacaaggacgaccatgtcattatttctgacagccattactgcccgctaggtgtggaacta
actgatgcaaagcaggatcagaaatctaagcagggatctccagcactgacgccaaaaaca
gatctctcagaccttgggttctctgaagacttctgccccagtcagaaagctttagatgga
tcctaccaagaagacacagaggttaagaaagaagagctccgcaatgaaccatcttctgtg
tccatgactgacagctccaaagctccacagcaacacctcactaaactaagaaccaaaagt
tctccctaccctgacgaacaagctctgaaagactacctcaagaggatgtctgatcagtcc
gttactgagcatttcgagactctctctatggcagggtcacgtcctccaagccgccaaaca
tcacttaaggatccgtacagactggaccagagtgacaaacccacatttccttctttagtc
aaactcagcacaagcaatagttttgaactctcagattttgcaccagtcacttcacaagat
aatacaccacattctttaataaacagcccaattggacaggctacgtctccaatggaggat
tctgtctgtgattccttacataatgactctgacaataatgaggtcgtcagtcctagtgac
cctataactactaacgatagcgaggaggacacctgtgacacaggcttggtgcctctgaga
aatcatctgtatccagatgagtctttagaggctgtaaacagtgccagcctcattgacgtt
aggattgatttcaaggaggaacatagtcgcagaagatctttaccaactctactcacagaa
gtatccccattggttttacatcggacaaacctttccagaaatggggtcagtacaacctca
gatggctctgaaaaggaggatcttcttccttctctgtttacagaggtgtggagttggggt
aggggtcaagagggtcagctgggtcatggagacgtcttgcccaggttgcaaccacttggc
atcaagagcttgagcaaaatggaagttgttaagattgttgctggatcaaatcactccctg
gccataacagctcagtgtcaggtttactcttggggtagcagtaaatttggtcagttgggt
aatatgaactccccaagcactgtgcctcatcttgtgaagatgtcagacggtattcgagtg
tgggacgcagcagggggacagacccacactgtactgttggctgatggagactgcttccag
cccatcctgtactacactggagagcagattcagccacgagccgactctcaaactggaaca
tacactcagacacctgccctgctgcccttctgcatgaaaattggctatgtgagcagtgta
attgctggaggagtgaactgtgcggctctggctgatcagaatgtgatggggttcattgcc
actttgcacgagctggcgtcagcagagaggaagttctactgctctctgagcaaaatgaag
agccaaatactgcgacccctactggctcaggagaatctcaagtcatatctgggcaaaatc
tccatgcatctgttccagaaaatggcagggtgtttcagtcgactgtgccatctaacgggg
cagaacagcacctctctcacccagttcctgcagcacagcagagatgttaaatcactggct
attgtgagaaaggcagcccttttcttagacacatataaagattacagcggccctgtaggg
aacttccttgtaatgggaggattccaagccctggtgaagccctcacaagaatgtctcggg
aaaaagctggacctgatacagaagctgttggagctcaaagagaaaaatgtggcgcccagt
gatttgctactgaatctgttttacatgccattgcagcacctgcgtgactatggcagactt
cttctgaagctggccacttgctttgatgtgacgtcggtggagtatcaaagaattcaagat
ggctgcttgcagtatgaggtcttggctcatctcctaagcaaacagaggaaagaggcagaa
actactcacaccttttggaagaacttctctggaaagagtttggagtccctgcggaagccg
tctcgtcgtttagtgtgtgagagcggcaataagggcctgacgctacagaacgctggaaga
ttctcagtcaactggttcattctctttaacgatgccttagttcatgcacagggaaccatt
ccatctaagaaatttttctcctctcactttgtttattcgctggcaacactctgggtggaa
cccttctcagacgagtctgttggcctgctggggctgaagctgacgacccctgaagagagc
tttgtggttctggcatcttcccctgaggagaagggaaagtggctatgggccatcaaccag
gctgtggatgatgcattaggaataggccttgataggaggggcattagtttctctggcagt
cagagggtggagcctcctatctcccgcactgccactcataccttcactaaagagggcaga
ctgaaagatgctacatatattggccgctggctctctggtaaacccaatggcaaaggcacc
ctaaagtggcctgatggcacaatatactgtggcacgtttaagaatggcctggaagacggg
tttggtgattatatgatgcccaataaaaccttcaacaagtatgatcgttataagggccac
tggaaggaaggcagaatgcatggctttggaacattctggtatgctacaggtgaagtatat
gagggctcgtttcaggataaccagcgccatggccatggcatgctgagcagcggccgcctg
gcctccccgtcatccagcagcgtgttcattggccaatggcttcatgacaagaaaaacggc
tacggggtctttgatgacattactaaaggagaaaagtacatgggtatgtggatggaggac
cagcgtcaggggagcggtgttgtggtcacccagtttgggctgtattatgagggagccttt
agtaataacaagatgatgggcaatgggcttctgctgtgtgatgatgacactgcttttgaa
ggagagttttcagaggactgggtgctgaatggaaagggagccctgtccatgcctaatgga
gacacttttgatggcatctttgtgggcgaatggggctctgatctgaaagtagctggaact
tttataaagccaggcctttatgatactgagaagaaggagaatatgcccttggtggtcggt
cgttatgtagttcctgcagagcagaagtggagggctgtatttgaggaatgttggagccgg
ctgggttgcgaaactccagggcagggagataacgagagagcctgggagaacatcgcagtc
attctgacaaccagccgcagacagcagaaagaaagtgtgtgcagcccaggtactctgagc
cgctcgcagtgtaagatgctggagagtttggaggtgattcctcagcacgtggggccggta
actgctgaaacctacgacactatccgccgctacatcgtcaagtcatgtgatactccacta
catcctctgggctggctgctggagacgctggtcaccttgtatagaatgacgtatgtaggt
gtgggttcaaacaggaggctcttacagcaggcggtgcaggagatccagtcctatctgaaa
cgcatcttcgaactgatcgggtttttgtttcctggtctgcctgaagaggggggctttatc
tctgaatcctcagggaggaggcccagtgactccctgtgcagcagcattaactctgacacc
gggcaacagggctggatcgttagtagctccagtctgctgatgccagttttgttgcctcgt
ctgtatcctcctctgttcatgctgtacacactggagcgagagcgagaggaggaggtgtac
tgggattgtgtgttacgccttaacaagcagcctgacttgtcccttctcaccttcctggga
gtgcctcagaaattttggccggtctcaatctctgttcttggagagaaaaaagaggtgctg
gctagcactaaagatgcttgctttgctactgcagtggagaccctgcaacagatcagcaca
acgttcactccagcagataaactgcaggtaattcagctgacgtttgaggatgtcacacag
gaagtgcaggctgtgctgggccatgactttttgtggtgtatggatgacctctttcccatc
ttcctctacatagttctgcgtgcacgcatcagaaacctgggctctgaggtgagcctcata
gaggacctgatggatcctgctctacaacatggagaacttggactcatgttcaccactctc
aaagcttgctactaccagattcagaatgagaagactacaggcatctag

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