Astyanax mexicanus (Mexican tetra): 103027472
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Entry
103027472 CDS
T05042
Symbol
lrrfip1b
Name
(RefSeq) leucine-rich repeat flightless-interacting protein 2 isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103027472 (lrrfip1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Other transcription factors
LRRFIP
103027472 (lrrfip1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
DUF6026
Motif
Other DBs
NCBI-GeneID:
103027472
NCBI-ProteinID:
XP_022531035
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Position
5:57194325..57247432
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AA seq
771 aa
AA seq
DB search
MSAQVTGRKRIPNREKLTAEDDALSQIAREAEARLAAKRAARAEAREIRMKELERQQKEI
YQAQKKYYGLDSKWGHIEQWMEDSERYSRHSRRHASISDDEERMSVGSRGSLRGNYSDLC
SSTGSLPSSRLQNGRPSALFSDAPRSRSHRGSVYEENVHSGARRFSGSSTRGPSDYSGFL
GSGSRASSRASSARASPVVEERSDFLEKGSRTASTLSAATLASLGGGLSRRGSCDTSISA
DTEASIREIKDSLVEVEEKYRKAMVSNAQLDNEKSNLMYQVDTLRDTLMELEELLYETRR
ECEEKSREYERERHAHSILQFQFNEMKETLKQSEELLTDAQHLHMKQDGYVREISDLQET
LEWKEKKIGALERQKDYSDIIRDERDALKDEVFRLRDALKKHGIVIGSEVTTNGETGGNG
IDGPENEESASRLAQEAHTPVTSGDSMLERSPDGRGSEVDSRTSGKTLRQSVASQKSCSS
IPRRRIRVETRESVASLGTSMATPMKSLNDIKPTEKRIFEKIQEVPQINHKNPKVGESLE
AKYVPEAFKHEIKYQDKENPDHKSISVDINAEAVKEKEAKTAEQTLEKHFIMIEEEHYEE
PLLEHKTQEDNQIETTTGLLNEDLNVLKLIKDPQTITTQDHSNLANQNPRKQERNEIEMP
GTSHSQCQDLINPLKLDDVTLSSSSLEIYSWTSEEEDSETEPELELEDIQGCRVAVPVEE
TGIAVFLDSCEEAGNVDFEVFVRERAYVHQKETETQEKRLKSRRKHDCSVS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcaggtcacgggaaggaagaggattcccaacagggagaagctgacggcggag
gatgatgctctgagtcagatagcccgcgaggcggaggcgagactggcggctaaacgagcg
gctcgggctgaagctcgggagatccgtatgaaggagctggagagacagcagaaggagatt
tatcaggctcagaagaaatattatgggctggacagcaaatggggccatattgagcagtgg
atggaggacagtgagcggtactctcgccactcacgaagacacgcctcgatatcagacgat
gaggagcggatgtctgttggaagtcgaggaagtttaaggggaaactactcggacctgtgc
agcagcaccggcagcctgccctcatccagacttcaaaatggccggccctctgcacttttt
agtgatgctcctcgctcgagaagccacaggggttctgtatatgaagagaatgtgcactct
ggtgctcggcggttcagtggctccagcactcgcggcccctcggactacagcggctttctg
ggctccggttccagagcctcgtccagggccagctcagcccgagccagcccggtggtggag
gagcggtcagacttcctggagaagggctccagaacagcttctactctctctgctgctact
ctagcgtcgctgggagggggtttatctcggaggggcagctgtgatacatcaatctctgct
gatacagaagcttccatacgagaaataaaggactctctggtcgaggttgaggagaagtac
aggaaggccatggtgtccaacgctcagctggacaacgagaagtccaacctgatgtaccag
gtggacacgctgagggacacactgatggagctggaggagctcctgtacgagacccgcagg
gagtgtgaggagaagtccagggagtatgaacgagagcgacatgctcatagcatcctgcag
ttccagtttaacgagatgaaggagacgttaaaacagagcgaggagctactaacggacgct
cagcacttgcatatgaagcaggacggatatgttagagagatttcagacctgcaggaaacg
ctggagtggaaggagaaaaagatcggggccttagagaggcagaaggactattcagatatt
atccgagatgagcgggatgcgctgaaggatgaggtgttccggctcagagatgctctgaag
aaacatggcatcgttatcggatctgaggtgacgacgaacggcgagacgggaggaaacggg
atagacggacctgagaacgaagaatctgcgtccagattggctcaggaagctcacacacct
gtaacgagtggagacagcatgctggagagatctccagacggacgaggctctgaggtggac
agcaggacgtctgggaagactttgagacagagcgtggcgtctcaaaagtcctgttcatca
attcctagaaggagaattagagtggagacgagagaatcagtagcatcattagggacatcg
atggcgacgccaatgaagagcttaaatgacatcaaaccaacagagaagagaatctttgag
aaaatccaagaagttcctcaaataaaccataagaaccccaaagttggagagtcattagaa
gctaaatatgttccagaagcctttaaacatgagataaagtaccaagacaaggagaaccct
gaccataagtccatttctgttgatattaatgcagaagctgttaaagaaaaggaagcaaaa
actgcagaacaaactctggagaagcatttcatcatgatagaagaagaacattatgaagaa
ccacttttagaacataaaacacaagaagataaccaaatagagacgaccacaggtcttcta
aatgaagatctaaacgtcttaaagctcataaaggatccccagaccatcacaacccaagat
cactcaaatttagccaatcaaaacccaaggaaacaagagcgaaatgaaattgagatgcca
ggaaccagccacagccaatgtcaagacctcattaacccccttaaactggatgacgtgact
ctcagcagctcctcgttagagatttattcctggaccagtgaggaagaagactctgaaact
gagccagaacttgagctggaggacattcagggctgtagagtggccgttccggtggaggag
acgggcatcgcggtgtttttagacagctgtgaagaagctggaaacgtggactttgaggtt
tttgtacgggagcgggcgtacgtgcatcagaaagagacggaaacccaagaaaaaaggctg
aaatccaggagaaaacatgactgcagtgtttcataa
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