Astyanax mexicanus (Mexican tetra): 103027512
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Entry
103027512 CDS
T05042
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103027512 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103027512 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103027512 (pdlim1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
CASP_C
Motif
Other DBs
NCBI-GeneID:
103027512
NCBI-ProteinID:
XP_007252302
Ensembl:
ENSAMXG00000004659
UniProt:
A0A8T2M1E3
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All DBs
Position
7:37519348..37527761
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AA seq
321 aa
AA seq
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MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDMILAIDGEPTEGM
THLEAQNKIKGCVEEMVLSIDRSESKMWSPLVSEEGKSHPYRMNLASEPQEVKHIGSAHN
RSALPFNSPGSRVITSQYNNPAGLYSSENIQSFNSAVDCVKTPDASTETSNNPEPSKPSQ
PRPAVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSEKPSGFRSVKPPTTKIA
SSVGSADKLSVCDKCGSGIVGMIVKLRDKFRHPECYVCTDCGVNLKQKGHFFVEDKIYCE
KHARELVTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcgagttgtcgtgcagggtcctggaccatggggatttagactggtcggtgga
aaagatttcgagcagcccctcactatctctcgggtaacccctggcagtaaagctgcccag
gccaatctttgtattggggatatgattcttgccatcgatggggagccaacggagggtatg
actcacttggaagcgcaaaacaagatcaagggatgtgtagaggaaatggtcctctcgatt
gacagatcagaatcaaaaatgtggtctccacttgtctctgaagaagggaagagccatcca
tacaggatgaatctagcatctgaaccacaggaagtgaaacatataggctcagctcacaac
aggagtgcactccctttcaattcacctggatcaagggtgattactagccagtacaataat
cctgcaggcttgtactcttctgagaacatccagagctttaacagtgccgttgattgtgtc
aagactcctgacgcatctactgaaaccagtaacaacccagagccatccaaacctagtcag
ccaagaccagcagttgctgctgactctgaagtctacaaaatgctgcaagagaaccaagag
tcagatgagcctccacgccagtctgcatcctttaaagtcctgcaggagatccttgaaact
ggtgactccgagaaaccctctggctttagaagtgtaaaaccccccacaacaaaaattgct
tcttctgtgggaagtgctgataaactctctgtatgtgacaaatgtggatcagggattgtg
ggaatgatcgtcaaacttcgagataaattccgacaccccgagtgctacgtctgcacagac
tgcggggtaaatctgaaacagaaggggcacttttttgtggaggacaagatttactgtgag
aagcatgcacgtgaacttgtgactcctcctgaaggctatgatgttgtcacagtctttcca
aaatag
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