KEGG   Astyanax mexicanus (Mexican tetra): 103027512
Entry
103027512         CDS       T05042                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103027512 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    103027512 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:amex04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   103027512 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2 CASP_C
Other DBs
NCBI-GeneID: 103027512
NCBI-ProteinID: XP_007252302
Ensembl: ENSAMXG00000004659
UniProt: A0A8T2M1E3
LinkDB
Position
7:37519348..37527761
AA seq 321 aa
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDMILAIDGEPTEGM
THLEAQNKIKGCVEEMVLSIDRSESKMWSPLVSEEGKSHPYRMNLASEPQEVKHIGSAHN
RSALPFNSPGSRVITSQYNNPAGLYSSENIQSFNSAVDCVKTPDASTETSNNPEPSKPSQ
PRPAVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSEKPSGFRSVKPPTTKIA
SSVGSADKLSVCDKCGSGIVGMIVKLRDKFRHPECYVCTDCGVNLKQKGHFFVEDKIYCE
KHARELVTPPEGYDVVTVFPK
NT seq 966 nt   +upstreamnt  +downstreamnt
atgccgctgcgagttgtcgtgcagggtcctggaccatggggatttagactggtcggtgga
aaagatttcgagcagcccctcactatctctcgggtaacccctggcagtaaagctgcccag
gccaatctttgtattggggatatgattcttgccatcgatggggagccaacggagggtatg
actcacttggaagcgcaaaacaagatcaagggatgtgtagaggaaatggtcctctcgatt
gacagatcagaatcaaaaatgtggtctccacttgtctctgaagaagggaagagccatcca
tacaggatgaatctagcatctgaaccacaggaagtgaaacatataggctcagctcacaac
aggagtgcactccctttcaattcacctggatcaagggtgattactagccagtacaataat
cctgcaggcttgtactcttctgagaacatccagagctttaacagtgccgttgattgtgtc
aagactcctgacgcatctactgaaaccagtaacaacccagagccatccaaacctagtcag
ccaagaccagcagttgctgctgactctgaagtctacaaaatgctgcaagagaaccaagag
tcagatgagcctccacgccagtctgcatcctttaaagtcctgcaggagatccttgaaact
ggtgactccgagaaaccctctggctttagaagtgtaaaaccccccacaacaaaaattgct
tcttctgtgggaagtgctgataaactctctgtatgtgacaaatgtggatcagggattgtg
ggaatgatcgtcaaacttcgagataaattccgacaccccgagtgctacgtctgcacagac
tgcggggtaaatctgaaacagaaggggcacttttttgtggaggacaagatttactgtgag
aagcatgcacgtgaacttgtgactcctcctgaaggctatgatgttgtcacagtctttcca
aaatag

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