KEGG   Astyanax mexicanus (Mexican tetra): 103027541
Entry
103027541         CDS       T05042                                 
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03010  Ribosome
amex04120  Ubiquitin mediated proteolysis
amex04137  Mitophagy - animal
amex04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    103027541 (uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103027541 (uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103027541 (uba52)
   04137 Mitophagy - animal
    103027541 (uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:amex03011]
    103027541 (uba52)
   04121 Ubiquitin system [BR:amex04121]
    103027541 (uba52)
Ribosome [BR:amex03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    103027541 (uba52)
  Archaea
    103027541 (uba52)
Ubiquitin system [BR:amex04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   103027541 (uba52)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 TBK1_ULD zf-C4pol OTU1_UBXL Dsc3_N
Other DBs
NCBI-GeneID: 103027541
NCBI-ProteinID: XP_022534553
Ensembl: ENSAMXG00000018989
LinkDB
Position
17:complement(8585130..8592359)
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaacgttgaccgggaaaaccatcaccctcgaggtggagcccagc
gacaccatcgagaatgtgaaggccaagattcaggacaaggaaggcattccccccgaccag
cagcgtctgattttcgctggcaaacagttggaggatggccgcactctgtcagattacaac
attcagaaagagtccactcttcacctggtgctgcgtctgagaggaggtatcattgagcct
tccctcaggcagctggctcagaaatacaactgtgagaagatgatctgccgcaagtgttac
gcccgtcttcaccccagagcggtcaattgccgtaagaagaagtgcggacacaccaacaac
ctgcgccccaagaagaagctgaagtaa

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