Astyanax mexicanus (Mexican tetra): 103027546
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Entry
103027546 CDS
T05042
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103027546 (scfd1)
Membrane trafficking [BR:
amex04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
103027546 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103027546 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
103027546
NCBI-ProteinID:
XP_022528331
Ensembl:
ENSAMXG00000038055
LinkDB
All DBs
Position
14:complement(45513558..45541749)
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AA seq
632 aa
AA seq
DB search
MAASIREKQTAALKRMLNFNAPPLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASSALAANAVNQVTKVFDQYLNFITLEDDMFVLCNQNKEQISYHAINKPDIMDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGAGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDLHLNRVSLEESPGSEVSPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDKYRAQEEEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIITDPDAGTPEDKMRLFLIYYITSQQPPSEGDLEQYKKALIDAGCDLSPL
NYIKQWKAFTKMAAAPANYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMDMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFLEAIVFVVGGGNYIEYQNLVDY
AKAKQGKRVLYGCSELFSAAQFTKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccatccgggagaaacagacagctgccctgaagcgaatgctaaattttaac
gccccacccctgaaaaatacagcagctgaaccagtatggaaggtccttatttacgatcgc
tttggccaagatatcatctctccccttctgtctgtgaaagagttaagagacatggggatc
actcttcacctattattgcactcagaccgagatcccattccagatgtccctgccatttac
tttgtaatgccaacagaggagaacatagacaggatatgtcaggacctgcggaaccaactt
tatgagtcctactacctgaactttatctcagcaatctccagaagcaaactggaggatatt
gcaagttctgctcttgcagcaaatgctgtgaaccaggtgaccaaagtgtttgatcaatat
ttgaacttcatcacactagaagacgacatgtttgtcctctgcaatcaaaacaaagaacag
atatcttatcatgcgatcaataagccagatatcatggacacagatatggaggctataatg
gatactattgtggacagtctgttctgcttctttgttactctcggtgctgtcccaataatc
cgatgtcccagagggaacgcagcagaaatggttgctgtgaaacttgacaagaaactgaga
gagaatttgcgagatgcgcgcaacagtctgttcaccggagataccatgggcgctggccag
ttcagtttccagaggccgctatttgttcttgccgaccgcaacctggatcttgccacccca
ctccatcacacatggacctaccaagccctcattcatgacgtcttggacctgcacttgaac
agggtcagtttggaggagtctccagggtccgaggtcagtccggcaggggctcgacccaaa
aagaagaataagaaaagctatgatctcactgctgctgacaagttttggcagaagcacaaa
ggaagcccgttcccagaggttgcagaatcggtgcaggaagagttggataagtacagagcc
caggaagaagaggtcaagcgtctaaagagcatcatgggtttagaaggggaggatgaggga
gccattagcatgttgtcggataacactgccaaacttacctcagctgttagttctcttccc
gagctcctagagaagaagagactgattgacctccacaccaacgttgccacagcagttctc
gaccacatcaagtctcgcaagctggatgtgtactttgaatatgaggaaaagctaatgagc
aaatcgactctggacaaatctcttctggacatcatcactgaccctgatgctggtacccca
gaggataagatgagactcttcctgatctactacatcacctcccagcaacccccatctgag
ggagatctggagcagtacaaaaaggctttgattgacgctggctgtgacctctcacccttg
aactacataaagcagtggaaggctttcacgaagatggcagccgcgccagccaattacggc
aacagtggagtgaaaccaatgggccttttctcccgagtgatgaacactggttcgcaattc
gttatggaaggggtgaagaatctggtgttgaaacagcataatttaccagttactcggatc
ttggacaacttgatggacatgaaatcaaatccggagacagatgactacaggtactttgat
ccaaagatgctgcgcggcagtgaaagctccattccaaggaacaagaacccctttctggag
gccattgtgtttgtcgttggtggaggcaactatatagaataccagaatcttgttgactac
gcaaaggcaaaacaggggaagagagtgctgtacggttgtagtgagctgttcagtgcagca
cagttcactaaacagctttcccaactgggccagaagtag
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