Astyanax mexicanus (Mexican tetra): 103027566
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Entry
103027566 CDS
T05042
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103027566
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
103027566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
XPG_I
Motif
Other DBs
NCBI-GeneID:
103027566
NCBI-ProteinID:
XP_007239975
Ensembl:
ENSAMXG00000009649
UniProt:
A0A8B9H035
LinkDB
All DBs
Position
22:complement(28284962..28295314)
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AA seq
740 aa
AA seq
DB search
MGKNKDKKAKRTSDDFLEMSSNSSYVPENPQQFALSTDTDSSVVGSPRRLDMFTYSTEKS
KKKQKKMDLAAQECENKSSEFQTEGEHEHGKKPKKRHKSRDCETPSDNPAELYITDMVNG
SAAETSHHEEPARKKKKKDKLRQTEETVAPAESESDVSRKKKKKKRSRDEVEEMNVTLKS
DENEMMTDKRTGDSEKKKKKKKEKDHQIQMFESAASSAQSVLENGFDASTETGEKQAENI
QVKKKEEKKKRHKEKQNLSQILGSPTTAAVQSVQQNRSTDLQETEAVNVSTGPKESPSKK
GKKNKATPKNGGLKTRQTQTITPKTEQTEEVSVNERVQIGTGFGTKKNNKKERVSKEIDQ
GLLEELKQFVPNVGSRVQADINKMIQYDLPRYKEFQKKGIPLNHGRFTMAENEILKKNVE
DFLALTGIDSGTKLFYSQRFEEEKSAINKLKKNHKFFEAIAKGIPRSCHDIYTRGRKIFD
DSTCKGRFTQTEIDQLCKLQTLHGNNWKKISELTGRSAVSLEKRYSQITKRLGVWSQKEL
QRLLGAVREYIISEVQPRPSNIRSLQVSREMLYKGLPWRNISEKVKTRSWIKCREKWMSI
LAAKMSSGASGEYKRTTNEGRIMLIKAMYQMQAEDVADVDWDQLSALFGDVPPCYVQKKW
NRLKVCFVPNWQSKCFADTIDFLYHKVLPCFESNGLYHPDHDILQLKETQAKNFLFTDIF
PDISDQDDYDDDDDDDEEEE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaacaaggacaaaaaagcaaagagaaccagtgatgatttcctggagatgagt
tccaacagttcctatgtccctgaaaatccccaacaatttgctctgtcaacagacacagac
agcagcgtcgtaggaagtccgagacgactggacatgtttacatacagtacagaaaagtct
aaaaagaagcaaaagaaaatggatctggccgcccaggagtgtgagaataagagctctgaa
ttccagactgaaggtgaacatgaacatggcaaaaagccaaaaaagaggcacaaatcaagg
gattgtgagacaccttcagataatcctgctgagctttacatcacagatatggtaaatggt
tcagcagctgaaacatcccatcatgaagagcctgcaaggaaaaagaaaaagaaagacaag
ctgagacagaccgaagagactgttgcgcctgctgaatccgaaagtgatgtttcaagaaaa
aagaagaaaaagaagaggtccagggatgaagtagaggaaatgaatgtaacactgaagtca
gatgaaaatgaaatgatgaccgataaaagaactggagactcagaaaagaaaaaaaagaaa
aagaaagaaaaggaccatcaaatacagatgtttgaatctgctgcttcatcagcacaatct
gtactagagaacgggtttgatgcatcaacagaaacaggggaaaagcaggcagaaaacata
caagttaaaaaaaaggaagaaaagaaaaaaagacataaagaaaagcaaaatctgtcccag
attttgggatctcctacaacagctgcagtacaatctgtacaacagaacagatccacagat
ctccaagagacagaggcagtgaatgtatccacaggaccaaaagaaagcccatcaaaaaaa
ggaaaaaagaacaaagcgacacccaaaaatggtggtttaaaaacacgacagacgcagacc
attactccaaaaactgaacagactgaagaagtttctgtaaatgagagggtccaaattggt
actgggtttggcacaaagaaaaataacaaaaaagagagagtctccaaagaaatcgatcaa
ggacttttagaagaactcaaacagtttgttccaaatgtagggtcccgggtacaagcggat
attaacaaaatgattcagtatgacctcccacggtataaggaattccaaaaaaagggtatt
cctctgaatcatggaaggttcacaatggcagaaaatgaaatcctaaaaaagaacgttgag
gactttttggccctcactggaatagacagcggcaccaagctcttttattctcagcgtttt
gaagaggagaaaagtgcaataaataaacttaagaagaatcataaattctttgaagcgata
gcgaagggaattcccaggtcctgtcatgacatttacactcgtgggagaaaaatcttcgat
gacagcacctgcaagggcagatttacgcagacagaaattgaccaactctgcaaactgcaa
actttacatggaaataattggaagaagatttcggagttgactggaagaagcgccgtctca
ctcgagaaacgatactctcagattactaaaaggttaggcgtgtggtcccagaaggaatta
cagaggcttttgggagctgtgcgggaatatatcatcagcgaggtccaacctagaccttcc
aatatccgctcactacaagtcagtagagagatgctttacaaagggctgccctggcggaac
atttctgaaaaggtgaaaactcgctcctggatcaagtgcagagagaaatggatgtcaatt
ttagctgccaaaatgtcttctggagcttctggggagtacaaaaggaccactaacgagggc
agaataatgcttataaaagcaatgtatcagatgcaagcagaagatgttgcagatgtcgac
tgggatcaattgtcggcattgtttggagatgttcctccatgttacgtgcaaaaaaaatgg
aacagacttaaagtctgttttgtgccgaactggcagtctaaatgttttgcagacacgatc
gacttcctctatcacaaagtcctgccatgctttgaatcaaatgggttgtaccatcctgac
catgacatcttgcagctcaaggaaacacaagcgaagaacttcctttttacggacatcttc
cccgacatcagcgatcaagatgattacgacgacgatgatgatgatgatgaggaggaagag
tag
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