KEGG   Astyanax mexicanus (Mexican tetra): 103027583
Entry
103027583         CDS       T05042                                 
Name
(RefSeq) WD repeat-containing protein 88 isoform X1
  KO
K24757  WD repeat-containing protein 88
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    103027583
Domain-containing proteins not elsewhere classified [BR:amex04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   103027583
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 EIF3I WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ASA1 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_NWD2_C DSE1_N Beta-prop_DCAF4 Beta-prop_WDR75_1st CFAP251_N Beta-prop_ACSF4 WD_LRWD1 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_VPS8 PAC11 Tricorn_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_Vps41 PQQ_2 UCP007778 Inh At3g27290_F_box_C Avr2
Other DBs
NCBI-GeneID: 103027583
NCBI-ProteinID: XP_022523853
Ensembl: ENSAMXG00000020201
LinkDB
Position
23:13792140..13801672
AA seq 395 aa
MDPLALDEAKTSEDSGEPETGSQWEHEPLSQIPVKVLRGHADSVSSCQFCFSDTRLLTGS
RDQTAIFWDVETGTQLMVLKGGHSAAITSCCLVPKTNRVITSSWDKKVNAWDLETGKILW
TKTQGGILMSCSVSGDGKYVASASDMESALYLNCADTGQRLHYLKGHHKSTITSCQFDAQ
SQHLASVSADRSIKLWDLCSHKTTLSINSAHTNVISSCCFTSNGQYLCTASWDRTLQLWD
IRAGSFRTKGGVQLKKGHDGCVSSCAFSSDASVLVSGAYDRTVTLWDMRGLRKTLILKGH
SDWVTDVNISTDKNWVISSSKDCTVRLWNIEQYENIPAVIETRRTQGMGFQIVKCEECGR
CFSVSRLENSSSVISKCVFCRLKSPLRDLPAPPPL
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggatcctctggcgcttgacgaggcgaagacttccgaggacagcggagaaccagagacc
ggctctcagtgggagcacgagccgctttcacagatcccagtaaaggtgttgaggggacat
gctgactctgtctccagctgccagttttgcttcagtgacactcgacttctcaccggctcc
cgtgaccagactgcaatattctgggatgtggagacagggactcagcttatggtgctgaaa
ggaggacattctgcagccatcactagttgctgtttggtcccaaaaacaaacagagtaata
acatcctcctgggataagaaggtgaatgcctgggacctggagaccggcaaaatactgtgg
acaaaaacacagggaggtatattgatgtcatgcagcgtgtcgggggatgggaagtatgtg
gcttcagcctcagacatggagagtgctctctacctcaactgtgcagacacaggacagaga
ctgcattacttgaaaggccatcataagtccacaataacgagctgtcagttcgatgcccag
agtcagcacttggcaagcgtatcagcggacagatccattaaattatgggacctctgctca
cacaaaaccactctgtccattaacagtgcccacaccaatgtaatttccagctgttgtttc
acctctaatggccagtacctctgcacagcatcatgggaccggaccctgcaactgtgggat
ataagggcgggttcgtttcgcaccaagggaggagtgcagctcaaaaagggccacgatggt
tgcgtcagctcctgtgctttctccagtgatgcttcagttctggtatctggggcttatgat
aggactgtaacactgtgggacatgaggggactcaggaaaactctaatactgaagggccat
tcggactgggtgacagatgtcaacatcagcacagataagaactgggtcatctcttcctca
aaggactgtacagtgcgtctatggaatattgagcagtatgaaaacatacctgcagtcatt
gagactaggaggacacagggaatgggctttcaaattgtgaagtgtgaagaatgtgggagg
tgtttctcagtgtctcggttggagaacagcagcagcgtgatcagtaaatgtgttttctgt
agactgaaatctccactcagagacctgcccgctcctccgcctctctga

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