Astyanax mexicanus (Mexican tetra): 103027639
Help
Entry
103027639 CDS
T05042
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103027639 (sntb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
103027639
NCBI-ProteinID:
XP_022529694
Ensembl:
ENSAMXG00000031564
LinkDB
All DBs
Position
6:9212855..9274353
Genome browser
AA seq
507 aa
AA seq
DB search
MAVAAAGPAQRAHRSGFVEVLVREQWHRVFASLGDEALTLSCEENGHAHEHVNGEADAGA
RGAFTFSEAEEHVPETIANRKRCVKVVKQDMGGLGISIKGGKENKMPILISKIFKGLAAD
QTQALYVGDAILSVNKVNLRDATHDEAVQALKKAGREVTLDVKYIREATPYVKKGSPVSE
IGWETPPPESPRLGSPLSDTPTLPSLSLQGDRRYIPLRMCYITRAMTTPDPENRQLELHS
PDGKHTVVLRCSDSASAQAWLAPLQSVASSLMDKVVSELREHVARNGIGGTRDIRHLGWL
AERTEREQRCWRPVVVVVTDRDLRLYDSMARMKENWLNPKHTYPLLSTRLVHSGPERGSP
QPGGELSFATRTGTRLGIETHVFRAETCKELSLWTRHIVTGCHASAEMIKEVTTSCRYKG
LDCRLVIHYELGFSVVEEVEDSHGQTLFSYPFEKLRMSSDNGVRMLYLDFGGTEGEVQLD
LHSCPKPIVFILHSFLSAKITRLGLVA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggccgcgggtcccgcgcagcgcgcgcacaggagcgggttcgtggaggtg
ctcgtgcgcgagcagtggcaccgcgtgttcgcgagtttgggcgacgaggcgctgaccctg
agctgtgaggagaacgggcacgcgcacgagcatgtaaacggcgaggcggatgcgggggcg
cgcggcgcgttcacgttctccgaggctgaggaacatgttcccgagaccatcgctaacagg
aagcgctgcgtgaaggtggtgaagcaggacatgggcgggctgggcatcagcattaaaggt
gggaaggagaacaagatgcccatcctcatcagcaagatctttaagggtctggcggcggat
cagacgcaggcgctgtacgtgggggacgccatcctgtcggtaaacaaggtgaacctgcgg
gacgccacccacgacgaggccgtgcaggccctgaagaaagccggccgagaggtcacgctg
gacgtgaagtacatacgagaagccacaccatacgtgaagaagggatctcctgtgtctgag
atcggatgggaaactcctccccctgaatctccacggcttggcagtcccctctcagacacc
cccaccctgccctcactttccctccagggagaccgcagatacatccctctcagaatgtgc
tacatcacccgggctatgaccacacctgacccagagaacaggcagttggagctgcactct
ccggatgggaagcacactgtggttctgcgctgttcggactcggcctcggctcaggcctgg
ttggcgcccctgcagtccgtggcctccagcctcatggataaagttgtctcggagcttcgg
gaacacgtggcacggaatggcatcggcgggacccgggatatacgccacctcggctggctg
gcagagaggacggagagggagcagcggtgctggaggccggtggtggtggtggtgacggac
agggatctgcggctgtatgatagcatggctcgcatgaaggagaactggctcaaccccaaa
cacacctaccctctactctctacacggctggtccactccggcccggagagagggtctcct
cagccgggaggggagctgtcctttgccacacggacgggcacgcgacttggcatcgagacc
cacgtgttccgcgctgagacctgcaaagaactttccctgtggacccgccacatagtgacc
ggttgccacgcctctgccgagatgatcaaagaagtaacaaccagctgcaggtataagggt
ctggactgcaggctggtcatccactatgagctgggcttctctgtggtggaggaggtggag
gactctcacggtcagacgctcttcagttacccctttgagaaactgcggatgtcctcggac
aacggcgtgcggatgctgtatttggatttcggaggaacagagggggaagttcagctggac
ctgcattcctgccccaaacccatcgtcttcatcctccactccttcctctcagccaagatc
accagactgggcttagtggcctaa
DBGET
integrated database retrieval system