Astyanax mexicanus (Mexican tetra): 103027666 Help Entry 103027666         CDS       T05042                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03430   Mismatch repair Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103027666 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:amex03400]     103027666 (msh6) DNA repair and recombination proteins [BR:amex03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103027666 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II PI3K_1B_p101 Motif Other DBs NCBI-GeneID:  103027666 NCBI-ProteinID:  XP_022540720 Ensembl:  ENSAMXG00000001143 LinkDB All DBs Position 7:13307238..13326373 Genome browser AA seq 1374 aa AA seqDB search MAKQSSIFNFFTKSPPPVTKSKSSPSPVEADLPSSVSKSSVSPKEEAKLAAQSAKPSRSL AKAAQAKLFGEKTLPPKQSSSFTFHAGDLVWAKLEGHPWWPCMVVPHPINGQQMRGKGRD QRSHVHFFDEPPTRGWVRTKYIREYKGSDSADAKTGGLFFSGKPVIRRAMELADQVLQDI PEERLKMPLCKDVSDEEEDDEEEMEVEKSVESNEEMSEEEEEEVKKVKPSRRSSRATVEN GQKPKRRRIVVASDSEGSGEEFKPDQVEGSSEEEDDGASSGVVEEEEESMPESEPDSPVK PVKRKRVAEKPAKKSKSTPSETPKRAPASLNSVAVDTKARLSAFSAPENFESQGTAGSGG VEGHGVWDHEKLDWLQDGKRKDARRRRQSDEDYDPTTLYVPEEFSNRVTPGMRRWWQLKS EMFDAVLFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFSRFSDVLVQKGY KVARVEQTETPEMMEARCKTMARPTKFDRVVRREVCRVITRGTQTYSVLDGAPSEVQSKY LLAVKEKNEEESAGHGHIYGVCFIDTSVGRFHVGQFHDDRHCSRLRTLVAHYAPAQVVFE KSNLSLETRKIFKAIVSSAMQEALNAGTQFWDAQKTLKTLAEEDYFKEIENEGGNAGSTL PTVLKAMTSDSDSLGLTPKEGYELALSALGGCMFYLKKCLVDQELLSMANFEEYVPVDVE MEQAEGASGFFARTRQRMVLDGVTLTNLEILQNSSTGGTEGTLLERLDTCCTPFGKRLLK QWLCAPLCNPTSIKDRLNAIEDLMGAPAQATEATELLKKLPDLERLLSKIHSMGTPLKGQ NHPDCRAVLYEELVYSKRKIADFLSALEGFKAMQEIVSLMESVSEGFQSKLLRQVVLLKT KCEDGLFPDLTPELNRWDTAFDHQKARTTGVITPKSGFDPEFDQAVSGIKDSERGLQDYL DRQKKRLGCRTLSYWGTGRNRYQMEVPDSVSERNVPEEYEVRSTKKGWKRYSTKEIERLF SELQSWEEKRDAALKDCMRRLFYNFDKNYRDWQTAVECMAVLDVLLSLSRYSQSADGPMA RPEVVLPESGPQSSPFLDLRGSRHPCVTKTFFGDDFIPNDIFIGCPGTEEEEGEDTNKAL ASCVLVTGPNMGGKSTLMRQCGLVVILAQLGCYVPADSLRLTPVDRVFTRLGASDRIMSG ESTFFVELSETASILLHGTNHSLVLLDELGRGTATYDGTAIASAVVKELSEKIHCRTLFS THYHSLVEDYAQDPAVKLGHMACMVENECEDPSQETITFLYKFINGACPKSYGFNAARLA SIPEEVIQSGHHKAREFERNTVALRIFKKLCAFADDPTANGKRFAKLVQMIGEL NT seq 4125 nt NT seq  +upstreamnt  +downstreamnt atggctaaacagagctctatctttaatttctttactaagtctccgccgcctgttaccaag tccaagtccagcccgtccccggtggaagcggatttaccgtcttcagtcagtaaatccagc gtttccccgaaagaggaggctaaactcgccgctcagagcgctaaacccagcaggagcctg gctaaagctgcccaggccaaactgttcggagagaaaactcttcctcccaaacagagctct tcgttcacttttcatgcgggtgatctggtgtgggcaaaactggaggggcatccttggtgg ccgtgtatggtagtgccccatcctataaatggacaacagatgaggggcaaaggccgagat cagagatcacatgtacatttctttgatgagccgccaacgcgaggctgggtcagaacaaaa tatattcgagagtataaaggttcagactctgctgatgctaaaacaggtggattgttcttc agtggtaaacctgtgattcgcagggcgatggaactggcagatcaagttctgcaggacatt cctgaggaaagactgaagatgccactctgcaaggatgtttcagatgaggaagaggatgat gaggaagaaatggaggtcgaaaagtcagtagaatctaatgaagagatgtcagaagaagaa gaagaagaagtgaaaaaggtgaaacccagtagacgttcatcacgcgccacagtagagaat ggtcagaagcccaaacgtcgtcgtattgttgtggcctctgacagtgaaggctctggggag gagtttaagccagaccaagtggaaggcagcagtgaagaggaagatgatggcgctagcagt ggagtcgttgaagaggaagaagagagtatgcctgagtcagaaccagacagcccagtaaaa cctgtaaaacgcaaacgagtggcagagaagcctgctaaaaaaagtaaatctacaccatct gagactcctaaaagagctcctgcttcccttaattctgttgcagttgacacaaaagctcga ctctctgctttctctgctccagaaaacttcgagagtcagggaactgctggatcgggaggt gtggaagggcatggtgtgtgggatcatgaaaaactggactggttacaagatggcaagagg aaggatgcacggaggcgacgtcagtctgacgaagactatgaccccaccaccctgtatgtg cctgaagagttctctaacagggttacgccaggaatgcggcgctggtggcaactcaagtcg gaaatgtttgatgctgttctgttctacaaggtaggcaaattctatgagctctaccacatg gatgctgtgattggtgtaaacgagttgggacttacctttatgaaaggcacttgggcacat tctggatttcctgaaataggcttcagccgtttctctgatgttcttgtccaaaaaggttac aaagtggctcgtgtggaacagactgagactcccgaaatgatggaagcacgatgcaagacc atggcacgtcccaccaaatttgatcgtgttgttcggcgagaggtgtgtagagtaattacg cggggcacgcagacctacagtgtactcgatggtgccccttcagaggtccagagcaagtac ttactggctgtgaaggagaagaacgaggaggaaagtgcagggcatggccacatctacgga gtctgttttatcgacacctctgtcggtcgctttcacgtcggtcagttccatgatgaccgt cactgttcccgtctacgtactctagttgcgcactatgccccagctcaggtggtgtttgaa aagagcaacctgtcattggagacgcgcaagatctttaaggccattgtgtcctctgccatg caggaggctctcaatgctggcacacaattctgggatgcccaaaagactctgaagacttta gcagaagaagactacttcaaagaaattgagaatgaaggtggtaatgcaggatccacactc cccactgtcctgaaagcaatgacctccgacagcgactcactaggtctcactcctaaagag ggatatgagcttgccctgtctgcccttggtggatgcatgttctatcttaaaaaatgtctt gtggaccaggaacttctttccatggcaaatttcgaagagtatgttccagttgatgtggaa atggagcaggcagaaggtgcatcaggtttctttgcccggacacgccaacgcatggtcctg gatggagtgactctgaccaaccttgagattctgcagaacagctctactggaggtacggaa ggtaccctgctagagcgcttagacacctgctgtactccatttggaaaaagactgcttaaa caatggctgtgtgcccccctctgcaatcccacatccattaaggacaggttgaatgcaatt gaagacctaatgggtgctccagcacaagcaactgaggctacagaactcctgaagaagctt ccagaccttgaaaggctacttagcaaaatccatagcatgggtactccactaaaggggcag aatcacccagactgcagggctgtgctctatgaggagcttgtctatagtaaacgcaagatt gcagacttcctctctgcactggaagggtttaaggccatgcaggagatagtgtctcttatg gaatctgtttcagaaggattccagtccaaactgctgagacaagtggtgctccttaaaact aaatgtgaggatgggctctttcctgacctaaccccagagcttaaccgctgggacactgct tttgaccatcaaaaagcacgcaccaccggagtgatcacacccaagtctggctttgaccca gagtttgatcaggccgtgagtggaatcaaagactctgagagaggtcttcaggattatctg gaccgacagaagaaaagactcggttgcagaactctgtcctattggggcactggaagaaat cgttatcagatggaggttccagacagtgtttctgagagaaacgtcccagaggagtatgag gtgaggtccaccaagaagggctggaagaggtactcaacaaaggaaattgagcgcttgttc tcagagttgcagagctgggaggagaagagggatgcagcattaaaagactgcatgaggaga ctgttctacaacttcgacaaaaactacagggactggcagactgcagtggagtgcatggct gttctcgatgtgttgctgagcttgtcccggtacagtcagagtgcagatgggccgatggca agacctgaggtagttctcccagagagtggtcctcagtcttcaccttttctggacctcaga ggatcccggcatccctgtgtcacaaagaccttctttggtgatgatttcatccccaatgac atcttcattggctgtccaggcactgaggaagaggagggtgaagacaccaacaaagctctg gcgtcatgtgtgcttgtcactggaccaaacatgggaggcaaatccaccctgatgagacag tgtggcctggtggttatcttggctcagctggggtgctatgttcctgctgacagcctgcgc ctcactcctgttgaccgagtgtttactcgccttggtgcttctgatcgcatcatgtctggt gagagtaccttctttgtggagctcagtgagacagccagtatcctgcttcatgggaccaac cattcacttgtacttctggatgaactgggcaggggtacggctacctatgacggcacagcc atagccagtgcagtggtgaaagagctgtctgagaaaattcactgccggacccttttctcc acacactatcactcattagtggaggactacgcccaggaccccgctgtcaaactcggacac atggcctgcatggtggagaatgagtgtgaggacccgagccaggagaccataacctttctc tacaagttcatcaatggcgcttgtcccaagagctacggcttcaacgccgcccgcctggcc agtatcccagaggaggtcatccagtcaggacatcacaaagctcgcgagtttgagaggaac acagtggccctgaggatcttcaagaaactctgtgcgtttgctgatgatcccacagctaat ggaaaacggtttgctaagctggtacagatgatcggcgagctctaa

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