Astyanax mexicanus (Mexican tetra): 103027677
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Entry
103027677 CDS
T05042
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103027677 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amex01009
]
103027677 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103027677 (tra2a)
Protein phosphatases and associated proteins [BR:
amex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103027677 (tra2a)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
SR proteins
103027677 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
GRP
Motif
Other DBs
NCBI-GeneID:
103027677
NCBI-ProteinID:
XP_007240738
LinkDB
All DBs
Position
3:complement(61993297..62011860)
Genome browser
AA seq
308 aa
AA seq
DB search
MSDIEEGNFARRDSRSPSKSERGSPVRGKSRSRSGSRSPSRASKRSESRSRSRSKSSRSR
SRRHSNRRYSRSRSHSRRKKSRSRSYSPEYRRRRSQSTSPMSNRRRHAGSRSTYSHDKKD
SVSHGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAF
VYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHNGGGGGGGGG
GGSSSSGGGGGGGGGGGRRRDSYYDRGYDRYDRYDEYDYRYSRRRSPSPYYSRYRSRSRS
RSYSPRRY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgaggagggaaacttcgcgagaagagattcccgctctccttccaagtcg
gagcggggcagtccggtccgcgggaagtcccgcagcaggtctggatcccgcagcccatcc
cgagcctccaaacgctccgagtcccgctcacgctccagatccaagtccagcaggtctcgc
tctcgccgtcactccaaccgccgctacagccgctctcgctctcactcgcgtcgcaagaag
tcccgctctcgctcctacagcccagagtaccggcgcaggaggagccagagcacgtcgccc
atgtccaaccgccgacgccatgccggcagtcggagcacgtacagccatgacaaaaaagat
tcggtcagtcatggtgatgccagggcgaatccagaccccaacacgtgtctgggtgtgttc
gggctgagtctgtacaccacagagcgggacctgagggaggtgttctcccgctacggcccc
ctcgctggagttaacgtggtgtatgaccagcgcaccggacgctcccgtggattcgccttc
gtctacttcgagcggatagacgactccaaagaggctatggagcgagccaatgggatggag
ctggatgggagacgcatcagagtggattactccatcactaaaaggccgcacacccccact
cctggaatctatatgggacgccccacacataacggaggaggaggaggaggaggaggaggc
ggcggcagcagcagcagtggaggtggaggaggaggaggaggaggaggaggacgcaggcga
gactcgtattatgaccgcggctacgaccgatacgacagatacgacgagtacgactacaga
tacagtaggaggcgctctccgtcaccgtactatagtcgctacaggtcccgttcacgatca
cgctcctacagcccacgacgatactga
DBGET
integrated database retrieval system
