Astyanax mexicanus (Mexican tetra): 103027745
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Entry
103027745 CDS
T05042
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103027745 (tsen34)
Enzymes [BR:
amex01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
103027745 (tsen34)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
103027745 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
103027745
NCBI-ProteinID:
XP_007235685
Ensembl:
ENSAMXG00000017568
UniProt:
A0A8B9JGW1
LinkDB
All DBs
Position
9:32001243..32005816
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AA seq
317 aa
AA seq
DB search
MDCERPAEDHGTRQNGGAGEGGEAAGAESEGDRERSREPRVNISLVGGTPLLWRAGDIRR
VREEDGVVGALVGSLARQPRQNVRLGRPLEILQEEASLLLERGRAAVQHTHNQEDEESHV
KAVEAYQSRLEHSYEEQCVLALEDKKAVLQRVMNAKQNDHTCDEGTEQAMRERLSSLQKG
FTLPRSAMAVQLCTARAGFGHCPEEAAFLAADWPMPRDERSETRFRVYRDLRGRGFYLTA
AGKFGGDYLVYPGDPLRFHAHFIALCLSMVEQLPLCDVLAVARLGSNVKKTVLLCSPRDS
GVEGEVVYSSLQWSGMV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgagaggccggctgaagatcacggcactcgacagaacggaggagccggggag
ggcggtgaagcagcgggggctgagagtgagggagaccgggagaggagcagggaaccccgt
gtgaacatcagcctggtcgggggcactcctctactgtggagagcaggcgacatccggaga
gtccgggaggaggacggggtggtcggggcgctggtgggctcgctggccaggcagccgagg
cagaatgtgcggctggggagaccgctggagatcctgcaggaggaagccagtctgctgctg
gagagaggcagggctgctgtacaacacacacacaaccaggaagatgaagaaagccatgtg
aaggctgttgaggcataccagtccagactggagcacagttatgaggagcagtgtgttctc
gccctcgaggacaagaaggcggttctgcagagagtaatgaatgcaaaacagaacgatcac
acatgtgacgagggcacagagcaggcaatgagagagcggctcagctccctgcagaaaggc
ttcacgttaccacgctccgccatggcagtgcagctctgcaccgcccgtgctggcttcggt
cactgtcccgaagaagctgctttcctggctgctgattggccaatgcccagagatgagcgg
tctgagacaaggttcagagtgtatagagatctgagggggaggggcttctacctcacagca
gcagggaagtttggtggagattatctagtgtatccaggtgatccactgcgtttccatgcg
cacttcattgctctgtgcctgtcgatggttgaacagttgccactgtgtgatgttctggct
gtggctcggctcggttctaatgtgaagaaaacagtgctgctgtgctccccacgggacagt
ggagtggagggggaggttgtgtattcatctctgcagtggagtggaatggtttag
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integrated database retrieval system
