Astyanax mexicanus (Mexican tetra): 103027754
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Entry
103027754 CDS
T05042
Symbol
kcnn1b
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1b isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103027754 (kcnn1b)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103027754 (kcnn1b)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
XhlA
Med4
DUF7310
Ion_trans
Motif
Other DBs
NCBI-GeneID:
103027754
NCBI-ProteinID:
XP_049341865
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Position
12:complement(8500270..8579507)
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AA seq
892 aa
AA seq
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MRLVLVKPANETSLLDSTGVARSPRAPDPCSAQRPEQQQQQQQQHQPAGGEEEEEEEEEE
EEEEEEVMQHRQPAAVHHQYQQYQQQHHQYQQQHQQQQQQQHQQPLPPPLPPLCSLPPPP
PPAHSNHQRRCSRTQPGRSCSAYPRPPPAPSNVKSPSRQTHAASPTPPPPPPPRRSCQHE
LLVLESKQQQQHQQQRCVCGTPPVQSDPFAGLLLLQSPVTSEPPAEPQEPILQVQQQRLV
RSSLPNCCVQQPALLQQHTQPQQQQQAPHAEWQQRKQQDREHDAKPKPQPHCLCLQPGSQ
PATARCGKSSPGGRRNEGHQVSPDASRLSHAWSRSSLSPSGPPVPQIAMNSCKYNGGVVR
PLSSLGASRRNLADLDSETQPLQTLHTSGLEVVVSKGNGDDPGKASRESLVREGGSNAPQ
KRNKDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALK
CLISLSTLILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERILFIVLELLVCAIHPIPG
HYVFTWTARLAFTYAPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGAL
NKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWL
ISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMM
DTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRK
LNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGQLEEKLDSITSSLQALPGLLSQA
ILQQQHHLLDGLIQHGLTLTRPSSQASERSWSSSVRRRRSPSTAPHTSSDSG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtcctggtcaaacccgccaatgaaacgagcctgttggactcgactggggtt
gcacgcagcccaagggctccggatccctgcagcgcccaaaggcctgagcagcaacagcag
cagcaacagcagcatcagccagctggaggggaggaggaggaggaggaagaagaagaggag
gaagaggaggaggaggaggtgatgcagcatcgccaaccggccgctgtgcaccaccagtac
caacaataccaacaacagcaccaccagtaccagcagcagcatcagcagcagcagcaacag
cagcatcaacagccactgccaccaccactgccaccactgtgcagcctgcctccgccgcca
cctccggcgcattccaaccaccaacgccgctgttcgcgcacccaacccgggcgaagctgc
tccgcttacccgcgccctcctccggctccttccaacgtcaagtctccatctcgccagacg
catgcagcatcaccaacgccaccacctccaccaccacccagacgcagctgtcagcacgag
cttttagtactcgaaagcaaacagcaacaacagcaccagcaacagcggtgcgtgtgcggc
acgccgcccgtgcagagcgaccctttcgccggattgctcctgctacagagcccggtgact
tcggagccgcccgcggagccccaggagccgattttacaggtgcaacagcagcggctggtg
agaagcagccttcccaactgctgcgtccagcagccggctctactgcagcaacacactcag
cctcagcaacagcaacaagcgccccatgcagaatggcaacagaggaagcagcaggaccgt
gagcacgacgcaaagcccaagccgcagccgcactgcctctgcctccagccgggcagccag
ccggccactgcgcggtgcggtaaaagcagcccggggggacgcaggaacgaagggcatcag
gtgagtccagatgccagcaggctgagccatgcttggtcgcggtcttcgctgtcccccagc
ggccccccggtccctcagatagccatgaacagctgcaagtacaatggaggcgtggtgaga
ccgctgagcagcctgggggcgtcccggaggaacctggccgatctggactcggagacgcag
cccctgcagaccctccacacctccggcctcgaggtcgtggtgtccaagggcaacggagac
gatccgggcaaggcgtcccgcgagagcctggtgcgagagggcgggagcaacgcccctcaa
aagaggaacaaggacatcggctacaaactcggccacaggagggcgctgttcgagaagcgc
aagcgcctgagcgactacgccctgatcttcgggatgtttggcatcgtcgtcatggtaacg
gagaccgagctctcctggggggtttacacaaaggaatcctcatattcatttgcactgaaa
tgccttatcagcctttccactctaattctcctcggtctgattattatgtatcatgcacga
gaaattcagctgttcatggtggataacggagcggacgactggcggatagccatgacctac
gagcggatactgttcatcgtcctggagctgctggtgtgtgccattcaccctatcccggga
cactacgtcttcacgtggacggcgcgtctggccttcacgtatgcaccgtccgtggcggac
gcggacgtggacattatcctgtccatccccatgttcctgcggctctacctgatcggccgg
gtcatgctgctccacagcaagttgttcacggacgcttcgtcgcgcagcatcggcgccctc
aacaagatcaacttcaacacgcgcttcgtcatgaagaccctgatgaccatctgcccgggc
accgtcctgctggtcttcagcatctcgtcctggatcatagcggcctggacagtgcgggtg
tgcgaaagatatcacgacaaacaagaagttaccagtaactttctgggcgcaatgtggttg
atctccataaccttcctgtccatcggatatggagacatggtgccgcacacctactgtggg
aagggggtgtgtctactgaccggaatcatgggagccggctgtaccgccctggtggttgct
gtggtcgccaggaagctggagttgaccaaggcggagaaacacgtccataactttatgatg
gacactcagctctgcaaaagagtgaagaacacggctgctaacgtactcagggaaacgtgg
ctcatctacaaacacaccaagctcgtgaagaagatcgaccacgccaaggtcagaaaacat
cagcgcaagtttctgcaagccattcaccaactgcggagtgtgaagatggagcagaggaag
cttaacgatcaggcaaacacactcgtcgatttagccaagacgcagaatgtgatgtatgac
ctggtgtcggagctgcaggagcgcagtgaggagctggacaagcggatcggtcagctggag
gagaaactggactccattacctccagcctgcaggctctgcctggcctgctgtcccaagcc
atactgcagcagcagcaccacctgctggacgggctgattcagcacggcctgacgctaacg
cggccgtcctcgcaggcgtccgagcgctcctggagctcgtcggtccgccggcggagatcc
ccgtccactgctccacacacgtcctccgacagcggatag
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