Astyanax mexicanus (Mexican tetra): 103027766
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Entry
103027766 CDS
T05042
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
amex04814
Motor proteins
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103027766
09142 Cell motility
04814 Motor proteins
103027766
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103027766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103027766
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103027766
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103027766
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103027766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Dynein_IC2
WDR55
WD40_Prp19
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
CAF1A_acidic
Mu-transpos_C_2
WD40_RFWD3
Beta-prop_SPT8
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
103027766
NCBI-ProteinID:
XP_007259882
Ensembl:
ENSAMXG00000014523
UniProt:
A0A8T2MG13
LinkDB
All DBs
Position
3:48936214..49034077
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKAETVPEDSDLDRKRRETE
ALLQSIGISPEPPLVPTQMSPSKSMSTPSETGSQDSVDGAAAGRTLQWDTDPSVLQLQAD
SELGRRMYRLGASKITQVDFLPREVVSYCKETQTPLAAHQSEEEEEEDEDNTEPKAGLES
DQKEDEENKDSKEGHPRELTEEEKQQILHSEEFVIFFDRSIRVMERALAEDSNIFFDYSG
RDLEDKEGDLQGGSSLSFSRLFYDERWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPAGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVG
PVDFSHLFVTSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPALFAAVDGMGRL
DLWNLNNDTEVPTASVTIEGAPALNRVRWASGGKEVAVGDSEGRVWIYDVGELAAAHTED
WARFARTLVEIRANRADGEEEGPVELTA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagtgacctaaaagcagagctggagcgcaagaaacagcgcctagctcaa
atcagggaggagaaaaagaggaaggaggaagagaagaagaagaaagagtcagaaacacag
cagaaagcagagactgtcccagaggactctgatttggaccgcaagcgcagagagactgag
gcgcttctacagagtatcggaatctcccccgagcctccgttagttccaacacaaatgtct
ccttcaaagtcaatgagcacaccgagtgagacaggcagtcaggactcagtggatggtgct
gctgcgggcaggaccctgcagtgggacactgacccctctgttctgcagctgcaggctgac
tctgagctcggacgcagaatgtacaggcttggagcatctaagatcacccaggttgatttc
ctgcccagggaggtggtctcgtactgtaaagagacacagactcctctagcagctcatcag
tctgaagaagaagaagaggaggatgaagataatacagagcccaaagcaggcctggagtcc
gaccagaaggaggatgaggagaacaaggactcaaaggaaggccacccgcgggagctgacg
gaggaggagaagcagcagattctgcactctgaggagtttgtgatcttttttgaccgcagc
attcgggtaatggagcgagcgcttgctgaagactccaacatcttcttcgactacagcggc
cgagacctcgaggataaagaaggagacctgcagggggggtctagtctgtccttcagtcgt
ctgttctatgatgagcgctggtctaagcatcgggtcatcacctgtctggactggtcccct
cagtacccagagctgctggtggcctcctataacaacaacgaggatgcccctcatgaacca
gacggcgtggccttagtgtggaatatgaagttcaagaagaccacgcctgagtacatctac
cactgtcagtctcccgtggtgtctgtgggtttcgcccggtttcatcctaacctgttggtg
ggtggcacctactcggggcagatcgtgctctgggacaaccgcagccaccggaggaccccg
gtccagaggacaccgctctctgcagctgcacacactcatccagtgtactgtgtaaatgtg
gtggggacccagaatgccaataacctgatcacagtgtccacagatggcaggatgtgctcc
tggagcctggacatgctctctcaaccacaggagagcatggagctggtatataacaagtct
aaaccagtagctgtgactgggatggccttcccagcaggagacgtgaataactatgtggta
ggcagtgaggagggaactgtatacactgcatctcgacatggcagtaaagctggtatctgt
gagatgtttgagggccaccaggggccggtgactggtatcagttgtcacagtgccgtgggc
cccgtggacttctctcacctgttcgtcacctcctcctttgactggactgtgaaactctgg
agcacaaagcacaataagccgctgtactcctttgaggacaatgcagattatgtgtatgat
gtcatgtggtctccggtgcaccccgctctctttgccgcagtggatgggatgggtcgtctg
gacctgtggaacctcaacaatgatactgaggtgcctacagccagtgtgacgattgaagga
gccccggctctgaaccgtgtgcgctgggcctctggaggtaaagaggtggctgtgggagac
tcagagggccgggtttggatctatgatgttggagagctggcagcagcgcacaccgaggac
tgggcacgcttcgctcgcacgctagtggagatccgcgccaaccgggccgacggtgaggag
gaggggccggtggagctgaccgcgtag
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