Astyanax mexicanus (Mexican tetra): 103027911
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Entry
103027911 CDS
T05042
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04144
Endocytosis
amex04517
IgSF CAM signaling
amex04530
Tight junction
amex04810
Regulation of actin cytoskeleton
amex05100
Bacterial invasion of epithelial cells
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103027911 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103027911 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
103027911 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103027911 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103027911 (arpc1b)
05100 Bacterial invasion of epithelial cells
103027911 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103027911 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103027911 (arpc1b)
Membrane trafficking [BR:
amex04131
]
Others
Actin-binding proteins
Arp2/3 complex
103027911 (arpc1b)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
103027911 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_Gbeta
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
eIF2A
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103027911
NCBI-ProteinID:
XP_007247874
Ensembl:
ENSAMXG00000009992
UniProt:
A0A8B9RFM2
W5KRP7
LinkDB
All DBs
Position
3:54833928..54846248
Genome browser
AA seq
369 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKKAGNSWTKTHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKP
APTPWGSKMPFGEVMFESTGTAGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKSAVVTSL
TSETLPLLCVTFITENSLVAAGHDCYPALFVYDAGKGAITFGGKLDVPKQSAQKGMTARE
RFQNLDKKATSDTKEAVLESLHKNSISQISLLDGGKAKCTKFCTTGMDGGMAIWDVKSIE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacagctttctactggaacccatcagctgccacgcctggaacaaggaccga
acccaaattgcactgtgtcccaataaccatgacgtccatatctacaaaaaggctgggaat
agctggactaaaactcatgagctaaaggagcacaatgggcaggtgactggtatcgactgg
gccccggagagcaaccgcatcgtcacctgtggcactgaccgcaacgcctacgtgtggacc
ctgaagggggacgtgtggaagcccactctggttattctcaggattaaccgtgctgcccgc
tgtgtgaagtggtcgcccaaagagaacaagtttgccgttggcagcggctcccgcctcatc
tccgtctgctacttcgagcaggagaatgactggtgggtgtgtaaacacatcaagaagcct
atccgctccaccatcctctgcctggactggcaccccaacaacatcctgctggctgctgga
tcctgtgacttcaaatgcaggattttctcggcctatattaaagaggtggaggagaagccc
gctccgaccccgtggggctctaagatgccattcggggaggtgatgtttgagtccactgga
actgcaggctgggtacacggggtctgcttctctgacagtggaaaccgtgtggcctgggcc
agccatgacagcactgtagctgtggctgagggaggcaagagtgctgtagtcactagtctg
acctcagagactcttcctctgctttgtgtgacgttcatcactgagaacagcttagtggct
gcaggccatgactgctaccctgcgctgtttgtctacgatgctggtaaaggggctattact
tttggagggaagctggatgtccccaagcagagcgctcagaagggcatgacggccagagag
cgcttccagaacctggacaagaaagccacttctgacaccaaagaggcggtgctggagtcc
ctgcacaaaaacagcatcagccaaatctcactcctggatggtgggaaagctaagtgtacc
aaattctgcaccactggaatggatggaggcatggccatttgggacgtaaagtccatcgaa
tctgccatgaaagacctgaagatcgtctaa
DBGET
integrated database retrieval system
