Astyanax mexicanus (Mexican tetra): 103027984
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Entry
103027984 CDS
T05042
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103027984 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103027984 (rabgef1l)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103027984 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
103027984 (rabgef1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
103027984
NCBI-ProteinID:
XP_022518345
Ensembl:
ENSAMXG00000038687
UniProt:
A0A3B1JP45
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All DBs
Position
4:41784360..41797541
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AA seq
503 aa
AA seq
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MSSRSEHRGIHVDQSDLKCKKGCGYFGNPAWQGLCSKCWRERSVHSRSRQIEEDRALAER
LQREEEAAAYTSSQQRAHSETSTTQVSKIEKRPVQKANAVPKVKKFFNTSPKTGLNKDAT
VQETQSTPTTSISQQPVADTDQATRQFIDFLKTLQKPGREIFKQCHAYCQHVAYKKDLGA
EELSESVQDFYQNLSDRLNTIYKWAPDRVEAVMDEVEKYMMLHLYEQAFCPESADDEVKD
LDIQKRIRALHWVTVQMLGAPLNEEIPAVSDSVIKAITDIIEMDSRRVPKDKLSYVTRCS
KHIFNSIKRSKREAASADDFLPTLIYVVLKANPPRLQSNIQYITRFCNPSRLMSGEDGYY
FTNLCCAVAFIEKLDAQSLSLSPEDFERYMSGQASPTRSQEPSSSQRSHRVELASGGSAP
VAKTYHQLDLLTDLETRQERVIEGAHRMENDLIEWKDGMERSVQDVLEGLQLETKPTATS
AIDSDNVDSEGLPPPLQPQVFAG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcgttcagagcacagaggcatccatgtggatcagtcagacctgaaatgtaag
aaaggctgtggctactttggaaatccagcctggcaaggcctgtgttccaagtgctggcgg
gaaaggagcgttcattctcggtccaggcagatagaagaggaccgggcactggcagagagg
ttgcaaagagaggaagaagctgcggcctatacgagtagccagcagagggcacactcagag
acctccaccacccaggtcagcaaaatcgagaagaggcctgttcaaaaagcaaacgcagtc
cctaaagtgaagaaattctttaatacatccccaaagactggcctgaacaaagatgccaca
gttcaagagacacagtcaacacccaccacttcaatcagccagcagcctgttgctgacacg
gatcaagccacaagacagttcatcgactttctgaagaccctgcagaagccgggcagagag
atctttaagcagtgccatgcctactgtcagcatgtggcctacaagaaggatcttggggct
gaggagctctcagaatctgtacaggacttctaccagaacctatctgaccgcttaaacacc
atctacaaatgggccccagaccgggtagaggctgtcatggacgaggtagagaagtacatg
atgctgcatttatatgagcaggctttctgcccagagtctgcagatgatgaggtcaaagac
ctggatattcagaagagaatcagggctttacactgggtcactgtacagatgctgggtgcc
ccactgaacgaagagatccctgcagtgtctgacagtgtaataaaggccattactgacatc
attgagatggattccaggcgtgttcccaaggacaaacttagctacgtcaccaggtgcagc
aagcacattttcaactccatcaagcgaagcaagcgcgaggctgcgtccgccgacgacttc
ctgccaacactcatctatgtggtactgaaggccaacccaccccgcctacagtccaacata
cagtacatcacccgcttctgcaaccctagccgactcatgagcggagaggacggatactat
tttacaaacctgtgctgtgccgtagctttcattgagaaattggatgcccagtctctgagc
ctgagtccagaggactttgagcgctacatgtccggccaggcatctcctaccagatcacag
gaaccctcttcctcacaaaggagccacagagtagagctggccagtggaggcagcgctcca
gtggcaaagacctaccatcagctagacctgctgaccgacctggagacacggcaggagaga
gtaatagagggagcgcaccggatggagaatgacctcattgagtggaaggacgggatggag
cgctccgtgcaggacgtcctggaagggcttcagcttgagacgaagcccacagcgacgtcc
gccattgactcggacaacgtcgacagcgagggtctgccccctcctctacagcctcaggtg
tttgctgggtag
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