Astyanax mexicanus (Mexican tetra): 103028080
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Entry
103028080 CDS
T05042
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103028080 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103028080 (bcor)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103028080 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
103028080
NCBI-ProteinID:
XP_022521150
LinkDB
All DBs
Position
23:23421568..23475835
Genome browser
AA seq
1754 aa
AA seq
DB search
MVDASAACRMNPLTALGIDRSSLMRESLHVHGGMVYPPGIRTLPTEKGYVGDRIPELLYK
PDVSLDGRKATNGYVGLYKSPPPGIQKPLVVPGTGADTLGLDRRVAPVDKPSELGLNGGS
ASGYLRLPWVSPYHEPGLYPFLDSSKYAALNMYKASFMSQPSPYLTQHLAYQPLCAGAGG
SAAGAERLFYMPPYPPAPISSPLAPPLRIPTATVAPTPLSPLVHHQDKTLQSIGPRIHHE
PSAFGQQSLHQQTQSHHQAQSERQHTNTGSISSLNSSSKSTRTPSSKNLSSSSSSVNNIS
TSSSIISCNSSSSSISSSSCASITSSSSTSIPVDSSPSLVMQAPRPAPRSSQPPGAPPPL
VDSTLDFQKSVFRSPSSSMSSSTPSHPFYMSQESRSPIRPASQKSKSKDGSSDQHRSGGS
ERKGCNSPIKTSTEKPVQQGAPTKDPADKPLDLSGKIMDFEGPPDGCPPKLEALAKLGYS
PNSRYGHPPSRELLKETLSPSSSAVSTSSKTPERPEIISTLHSTWVVPSTTQTHSSESNQ
SKSSSVIKNKNLEHVTQQPRSSSCPRIGEPNNSAVPNPAPVPANSACRPSSASPSPKVNG
DWPKSAPTPPEKVPATHPHRGGSLTSASKPPKIPKKSDTPEIGFKSQQPHIENGHPPSHL
YLPQSDSYLPTSLAYANRYLPYSVPESISLSHLQLPSKGPVYPHPVLLSSSSLYAARLPH
KPGLPYGIPTTHGEYLTYHDSQEMVHPLMSSHMPLDPKVNERLELRSRPQEKAWQHEEGP
YKQQSASDIDACYKSERESEGPELLASRPQSKLHTASKDEIVCIDLVQDDTDGSPEPDKY
CASPAKQREPTKPASSGIGEGTGSAGNSKGKEPELMHILRSSQPVESRPAEAERLPEPCS
PAEAQERPESPGQSQGEESSSERSPLSPLLEEQTLRCARTSGDRVRPDVANFKPDRHHAI
RQYMDLGKERTENTDSHEEEEDGHGCSKSRRSSLAKRIANSSGYVGDRFKCVTTELYADS
SKLSREQRALQMEVVSPEDSNLSQPAANCERAMMRFSELELKEKEGCVSSPSPVRERGLA
EGQRGEPEWDQGQHCSITPAAPAEQTEPHSGGNRVPVLQRCVQPEDKRMRDERERKEQVG
EGGIVGTATGRKRPLSLEPSQGHPDCTHSAEERERDGERERTRERDVAEDENTIPAKRSR
LIPADVWRQPSEQEVKNLKVCIELTGLRLSKPRQLQNLQELWDRQGALSREKTCPTQPNP
CTPHSVPCGERKSRTGGADEKGWGRKDLGYTDIETAPVLSGLCSPDCKPLPPSRLSDKRQ
RLKEHRRGGLSPDLDDELAPRLLRHGDLEKPKGKRQCKTKHIGHRELRMLAANEESPELS
PAHPLKVAKHSPSDCLGPPPVIQRTPSPSSPAAPPSPPLQPAAAAALVAVVTPAPALVPS
EPPASRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDNAGYCAL
HEACARGWFTIVQHLLQHGADINCSAQDGTRPLHDAVENDHLDIVRLLLSYGADPTLATY
SGRGLLKMTHSDIMEGFLSDYFADLQGRADDDPGVYWEFYGSAVCEPGDDPAAFDILADP
PGPEDEEDDHREVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLKRLKMSARTFRST
FSHIEVVTIAEAEFYKQVSLSQLFSCPEELDGFLPDSKELLDLVEISAELVALLGSSLEY
LDDRWEPSVFKPRL
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaagtgcagcctgcagaatgaaccctctcacagcacttggcatcgatcgg
agcagcctgatgcgggaaagcctccatgttcacgggggaatggtttatccgccaggaatc
cgaactctgccaacagaaaagggctacgttggagaccggatcccagaactgctctataaa
cctgatgtgtcactggacggcaggaaagcaacaaacggctatgtcggactttataaaagc
cccccaccggggattcagaagcccttggtggtgccgggtactggggcagacactttgggc
ttggataggcgtgttgcacctgtggataagccctcagagttgggtttaaacgggggtagc
gcaagcggctacctgcgtctcccatgggtcagcccataccatgagccaggattatatccc
tttctagactccagcaaatatgctgctctgaatatgtacaaagcatcatttatgtcacag
ccttcaccatacctgacccaacatctggcctaccagccactttgtgctggggcaggaggg
agtgcagctggtgcagaacgcttgttttacatgcctccttaccccccagcccccatttca
tcacctcttgcacctcctttaaggattcctacagctacagtagcccctacaccactgtca
cctctcgtgcatcatcaggacaaaaccttgcaaagcattgggccaaggattcaccatgaa
ccttctgcgtttgggcagcagtccttgcatcagcagacccagtcacaccatcaggcacaa
agcgagaggcaacacactaacactggaagtattagcagccttaatagcagcagcaagtcc
acccgaactccttccagcaagaacttgagcagcagcagtagtagtgttaataatattagc
actagtagtagtattattagctgtaacagcagtagctccagtatcagtagtagcagttgt
gcaagcataactagcagctccagtacaagcatccctgtagactcaagtccttctcttgtg
atgcaagcacctcgtcctgctccacggtcctcccaaccgcctggtgctcccccaccactt
gtggacagcactttagactttcaaaagtctgtatttcgaagtccttcgtcatcaatgtcc
tcatccactccatcccaccctttttacatgtcccaggagagccgctcccccataaggcct
gccagtcagaagtctaagtctaaagatggaagctctgatcagcacaggagtggggggagc
gagaggaaaggttgtaattctcctattaaaacctccactgagaaacctgtacagcagggt
gctcctaccaaagacccagcagacaagcctttggatctgtctggcaagatcatggacttt
gaaggacctccagatggatgtcctccaaaattagaggctttggcaaagctgggctactcg
cctaactctcgttatggacatcccccgagcagagagcttctgaaagagactctctctcca
tcatcttctgctgtcagcacttcttctaaaactccagagaggcctgagattattagcact
ttacactctacctgggtggtgccaagcacgacccagacacacagctctgaatccaaccag
agcaaaagttcttcagtcataaaaaacaaaaatctagagcatgttactcagcagcctagg
agctcttcttgtccacggattggtgaacccaacaatagcgctgtgcctaaccctgctccc
gttcctgcaaattcggcttgtcgaccatcgtctgcctctccttctcccaaagttaatggt
gattggccaaagtctgcccccaccccaccagagaaggtgccagctactcatcctcatcgg
ggagggagccttacctcggcttcaaagcctccaaagattcctaaaaagtcagacacccct
gaaattggcttcaaatcccagcagcctcacatagaaaatggtcaccctcccagtcatctc
tacctgccccagagtgattcttacttgcccactagcttagcttatgccaacagatacctt
ccctattccgttccagagagtatatccctctcacacttacagttgcccagcaaagggcca
gtataccctcacccagtcctgctgagcagcagcagtctgtatgctgcacgtttgcctcat
aaacctggccttccttatggaataccaaccactcatggagagtatctgacctaccatgat
tcacaagagatggttcatcccctgatgtcttcccacatgcctcttgaccccaaagtcaat
gagcgccttgaactgaggtctagaccccaggaaaaggcttggcaacatgaggaaggtcct
tacaagcagcagagtgcctctgacattgatgcatgctacaaatctgagagggagtcagaa
gggccagaacttctggcctccaggcctcagagcaagctgcacacagcaagcaaagatgag
atcgtctgcatcgacctggtccaagatgacacagatggcagtcctgagccggacaagtac
tgcgccagccctgccaagcaaagagagcccaccaagccagccagcagtgggatcggggag
ggaactgggagtgctggtaattccaaagggaaggagccagaactcatgcatatcctgcgc
tccagccagccagtggaatccaggccagctgaggctgagcggctgccagaaccttgtagc
cctgctgaggcgcaggagcgccccgagtctcctgggcaaagccagggcgaggaaagttcc
agtgagcgcagtcctctgtctccactgctggaggagcaaacactgcgctgtgccaggacc
tccggtgacagggttcgtccagacgtcgcaaatttcaaaccagatcggcaccatgccatt
cggcagtacatggatttgggcaaggagaggacagaaaacacagactctcacgaggaagag
gaagacgggcatggttgctctaaaagcaggcgttctagcttggccaaaaggatagccaac
tcgtctggctatgtgggcgaccgcttcaagtgcgttaccacagagctgtacgcagactcc
agcaaactgagtcgggaacagcgcgccctacagatggaagtcgtatcaccagaggacagt
aatttaagtcaaccagccgctaactgcgagcgtgcaatgatgcgtttctcagagctggag
ctgaaggagaaggaggggtgcgtgtcgagccccagcccggtgagagagaggggtctggcg
gagggccagcgcggagaaccagagtgggatcagggccaacactgctctataactccagca
gcgccggcggagcagacggagccacacagcggtgggaaccgcgtccccgtcctgcagcgc
tgcgtccagccggaggacaagagaatgagggatgagagggagaggaaggagcaggtgggg
gaggggggcattgtcggcacggcaaccggccggaaacgcccgctcagtctggaaccgagc
caaggccaccctgactgcacacactcagccgaggagagagagagagacggagagagggag
agaacgagggagagagatgtagcggaggacgagaacaccataccggctaaaagatcccga
ctcattccagcggacgtctggcgccagccctcagagcaagaggtgaagaacctgaaggtg
tgtatcgagctcactggcctgcggcttagcaaaccccggcagctccagaacctgcaggag
ctgtgggaccgccagggggcgctgtcccgggaaaaaacctgccccacccagccgaacccc
tgcactccacacagcgttccctgcggagagaggaagagcaggacaggtggagcagatgag
aagggatggggacggaaggatctgggatatactgacatcgaaacagctccggttctctcc
gggctctgttctccggactgtaagcccctccccccctcccgcctctcggataagcggcag
cggctgaaggaacaccggcgcggcggcctctcgcccgacctcgatgacgagctcgcgccc
cgcctgctgcgccacggcgacctcgagaagcccaagggcaagcggcagtgcaagaccaag
cacatcggccaccgcgagcttaggatgctcgcggccaatgaggaaagccctgagcttagc
cccgcccacccgctcaaggttgcgaagcactctccgtcggactgcctcggcccccctccg
gtcatccagcgcaccccctcgccctcatctcccgccgcccctccctcgccccccctccag
cctgctgcggcagcggcgctggttgctgtggtcaccccagcgcccgccctggtgccctcg
gagccgcctgccagccgccccatgccccctgaagcccgccggctcatagtcaacaaaaac
gccggcgagaccctgctgcagcgcgccgcgcgcctcggctacgaggaggtggtgttgtac
tgtttggagaataaggtgtgtgatgtgaatcatcgtgataacgcaggttattgtgcgttg
cacgaggcgtgtgctcgaggctggttcaccatcgtccagcacctgctgcagcatggagca
gacatcaactgcagcgcacaggacggcaccaggcctctgcatgacgcggtggagaacgat
cacctggacatcgtacggctcttgctgtcgtacggcgccgaccccacgctggccacctac
tccggacgaggcctgctgaagatgacccacagtgacatcatggaggggtttctgtctgat
tattttgcagacctgcagggtcgagcggacgatgaccccggtgtgtattgggagttctat
ggcagtgcagtgtgtgaacctggggatgaccctgcagcgtttgatatcctggccgacccg
cccggtcccgaggacgaggaggacgaccacagagaggtgtttgagtttgagttctctgac
cggccgctgctgccctgctacaacatccaggtctctctgtctcaggggcccaggaactgg
ctgctgctctctgacgttctgaagcgtttgaagatgtcggcgaggactttccgctccacg
ttctcccacattgaggtggtgaccatcgcagaggccgagttctacaagcaggtgtcgctc
agccagctgttctcctgcccggaggagctggacgggttcctgcccgacagtaaggagcta
ctggaccttgttgagatcagcgcggagctagtcgccctactcggatcatcactcgagtac
ctggacgaccggtgggagccgtctgtctttaagccacggttgtga
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integrated database retrieval system