KEGG   Astyanax mexicanus (Mexican tetra): 103028080
Entry
103028080         CDS       T05042                                 
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
  KO
K23215  bcl-6 corepressor
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103028080 (bcor)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103028080 (bcor)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     103028080 (bcor)
SSDB
Motif
Pfam: PUFD BCOR Ank_2 Ank Ank_3 Ank_5 Ank_4 ANK_LRRK2
Other DBs
NCBI-GeneID: 103028080
NCBI-ProteinID: XP_022521150
LinkDB
Position
23:23421568..23475835
AA seq 1754 aa
MVDASAACRMNPLTALGIDRSSLMRESLHVHGGMVYPPGIRTLPTEKGYVGDRIPELLYK
PDVSLDGRKATNGYVGLYKSPPPGIQKPLVVPGTGADTLGLDRRVAPVDKPSELGLNGGS
ASGYLRLPWVSPYHEPGLYPFLDSSKYAALNMYKASFMSQPSPYLTQHLAYQPLCAGAGG
SAAGAERLFYMPPYPPAPISSPLAPPLRIPTATVAPTPLSPLVHHQDKTLQSIGPRIHHE
PSAFGQQSLHQQTQSHHQAQSERQHTNTGSISSLNSSSKSTRTPSSKNLSSSSSSVNNIS
TSSSIISCNSSSSSISSSSCASITSSSSTSIPVDSSPSLVMQAPRPAPRSSQPPGAPPPL
VDSTLDFQKSVFRSPSSSMSSSTPSHPFYMSQESRSPIRPASQKSKSKDGSSDQHRSGGS
ERKGCNSPIKTSTEKPVQQGAPTKDPADKPLDLSGKIMDFEGPPDGCPPKLEALAKLGYS
PNSRYGHPPSRELLKETLSPSSSAVSTSSKTPERPEIISTLHSTWVVPSTTQTHSSESNQ
SKSSSVIKNKNLEHVTQQPRSSSCPRIGEPNNSAVPNPAPVPANSACRPSSASPSPKVNG
DWPKSAPTPPEKVPATHPHRGGSLTSASKPPKIPKKSDTPEIGFKSQQPHIENGHPPSHL
YLPQSDSYLPTSLAYANRYLPYSVPESISLSHLQLPSKGPVYPHPVLLSSSSLYAARLPH
KPGLPYGIPTTHGEYLTYHDSQEMVHPLMSSHMPLDPKVNERLELRSRPQEKAWQHEEGP
YKQQSASDIDACYKSERESEGPELLASRPQSKLHTASKDEIVCIDLVQDDTDGSPEPDKY
CASPAKQREPTKPASSGIGEGTGSAGNSKGKEPELMHILRSSQPVESRPAEAERLPEPCS
PAEAQERPESPGQSQGEESSSERSPLSPLLEEQTLRCARTSGDRVRPDVANFKPDRHHAI
RQYMDLGKERTENTDSHEEEEDGHGCSKSRRSSLAKRIANSSGYVGDRFKCVTTELYADS
SKLSREQRALQMEVVSPEDSNLSQPAANCERAMMRFSELELKEKEGCVSSPSPVRERGLA
EGQRGEPEWDQGQHCSITPAAPAEQTEPHSGGNRVPVLQRCVQPEDKRMRDERERKEQVG
EGGIVGTATGRKRPLSLEPSQGHPDCTHSAEERERDGERERTRERDVAEDENTIPAKRSR
LIPADVWRQPSEQEVKNLKVCIELTGLRLSKPRQLQNLQELWDRQGALSREKTCPTQPNP
CTPHSVPCGERKSRTGGADEKGWGRKDLGYTDIETAPVLSGLCSPDCKPLPPSRLSDKRQ
RLKEHRRGGLSPDLDDELAPRLLRHGDLEKPKGKRQCKTKHIGHRELRMLAANEESPELS
PAHPLKVAKHSPSDCLGPPPVIQRTPSPSSPAAPPSPPLQPAAAAALVAVVTPAPALVPS
EPPASRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDNAGYCAL
HEACARGWFTIVQHLLQHGADINCSAQDGTRPLHDAVENDHLDIVRLLLSYGADPTLATY
SGRGLLKMTHSDIMEGFLSDYFADLQGRADDDPGVYWEFYGSAVCEPGDDPAAFDILADP
PGPEDEEDDHREVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLKRLKMSARTFRST
FSHIEVVTIAEAEFYKQVSLSQLFSCPEELDGFLPDSKELLDLVEISAELVALLGSSLEY
LDDRWEPSVFKPRL
NT seq 5265 nt   +upstreamnt  +downstreamnt
atggtggatgcaagtgcagcctgcagaatgaaccctctcacagcacttggcatcgatcgg
agcagcctgatgcgggaaagcctccatgttcacgggggaatggtttatccgccaggaatc
cgaactctgccaacagaaaagggctacgttggagaccggatcccagaactgctctataaa
cctgatgtgtcactggacggcaggaaagcaacaaacggctatgtcggactttataaaagc
cccccaccggggattcagaagcccttggtggtgccgggtactggggcagacactttgggc
ttggataggcgtgttgcacctgtggataagccctcagagttgggtttaaacgggggtagc
gcaagcggctacctgcgtctcccatgggtcagcccataccatgagccaggattatatccc
tttctagactccagcaaatatgctgctctgaatatgtacaaagcatcatttatgtcacag
ccttcaccatacctgacccaacatctggcctaccagccactttgtgctggggcaggaggg
agtgcagctggtgcagaacgcttgttttacatgcctccttaccccccagcccccatttca
tcacctcttgcacctcctttaaggattcctacagctacagtagcccctacaccactgtca
cctctcgtgcatcatcaggacaaaaccttgcaaagcattgggccaaggattcaccatgaa
ccttctgcgtttgggcagcagtccttgcatcagcagacccagtcacaccatcaggcacaa
agcgagaggcaacacactaacactggaagtattagcagccttaatagcagcagcaagtcc
acccgaactccttccagcaagaacttgagcagcagcagtagtagtgttaataatattagc
actagtagtagtattattagctgtaacagcagtagctccagtatcagtagtagcagttgt
gcaagcataactagcagctccagtacaagcatccctgtagactcaagtccttctcttgtg
atgcaagcacctcgtcctgctccacggtcctcccaaccgcctggtgctcccccaccactt
gtggacagcactttagactttcaaaagtctgtatttcgaagtccttcgtcatcaatgtcc
tcatccactccatcccaccctttttacatgtcccaggagagccgctcccccataaggcct
gccagtcagaagtctaagtctaaagatggaagctctgatcagcacaggagtggggggagc
gagaggaaaggttgtaattctcctattaaaacctccactgagaaacctgtacagcagggt
gctcctaccaaagacccagcagacaagcctttggatctgtctggcaagatcatggacttt
gaaggacctccagatggatgtcctccaaaattagaggctttggcaaagctgggctactcg
cctaactctcgttatggacatcccccgagcagagagcttctgaaagagactctctctcca
tcatcttctgctgtcagcacttcttctaaaactccagagaggcctgagattattagcact
ttacactctacctgggtggtgccaagcacgacccagacacacagctctgaatccaaccag
agcaaaagttcttcagtcataaaaaacaaaaatctagagcatgttactcagcagcctagg
agctcttcttgtccacggattggtgaacccaacaatagcgctgtgcctaaccctgctccc
gttcctgcaaattcggcttgtcgaccatcgtctgcctctccttctcccaaagttaatggt
gattggccaaagtctgcccccaccccaccagagaaggtgccagctactcatcctcatcgg
ggagggagccttacctcggcttcaaagcctccaaagattcctaaaaagtcagacacccct
gaaattggcttcaaatcccagcagcctcacatagaaaatggtcaccctcccagtcatctc
tacctgccccagagtgattcttacttgcccactagcttagcttatgccaacagatacctt
ccctattccgttccagagagtatatccctctcacacttacagttgcccagcaaagggcca
gtataccctcacccagtcctgctgagcagcagcagtctgtatgctgcacgtttgcctcat
aaacctggccttccttatggaataccaaccactcatggagagtatctgacctaccatgat
tcacaagagatggttcatcccctgatgtcttcccacatgcctcttgaccccaaagtcaat
gagcgccttgaactgaggtctagaccccaggaaaaggcttggcaacatgaggaaggtcct
tacaagcagcagagtgcctctgacattgatgcatgctacaaatctgagagggagtcagaa
gggccagaacttctggcctccaggcctcagagcaagctgcacacagcaagcaaagatgag
atcgtctgcatcgacctggtccaagatgacacagatggcagtcctgagccggacaagtac
tgcgccagccctgccaagcaaagagagcccaccaagccagccagcagtgggatcggggag
ggaactgggagtgctggtaattccaaagggaaggagccagaactcatgcatatcctgcgc
tccagccagccagtggaatccaggccagctgaggctgagcggctgccagaaccttgtagc
cctgctgaggcgcaggagcgccccgagtctcctgggcaaagccagggcgaggaaagttcc
agtgagcgcagtcctctgtctccactgctggaggagcaaacactgcgctgtgccaggacc
tccggtgacagggttcgtccagacgtcgcaaatttcaaaccagatcggcaccatgccatt
cggcagtacatggatttgggcaaggagaggacagaaaacacagactctcacgaggaagag
gaagacgggcatggttgctctaaaagcaggcgttctagcttggccaaaaggatagccaac
tcgtctggctatgtgggcgaccgcttcaagtgcgttaccacagagctgtacgcagactcc
agcaaactgagtcgggaacagcgcgccctacagatggaagtcgtatcaccagaggacagt
aatttaagtcaaccagccgctaactgcgagcgtgcaatgatgcgtttctcagagctggag
ctgaaggagaaggaggggtgcgtgtcgagccccagcccggtgagagagaggggtctggcg
gagggccagcgcggagaaccagagtgggatcagggccaacactgctctataactccagca
gcgccggcggagcagacggagccacacagcggtgggaaccgcgtccccgtcctgcagcgc
tgcgtccagccggaggacaagagaatgagggatgagagggagaggaaggagcaggtgggg
gaggggggcattgtcggcacggcaaccggccggaaacgcccgctcagtctggaaccgagc
caaggccaccctgactgcacacactcagccgaggagagagagagagacggagagagggag
agaacgagggagagagatgtagcggaggacgagaacaccataccggctaaaagatcccga
ctcattccagcggacgtctggcgccagccctcagagcaagaggtgaagaacctgaaggtg
tgtatcgagctcactggcctgcggcttagcaaaccccggcagctccagaacctgcaggag
ctgtgggaccgccagggggcgctgtcccgggaaaaaacctgccccacccagccgaacccc
tgcactccacacagcgttccctgcggagagaggaagagcaggacaggtggagcagatgag
aagggatggggacggaaggatctgggatatactgacatcgaaacagctccggttctctcc
gggctctgttctccggactgtaagcccctccccccctcccgcctctcggataagcggcag
cggctgaaggaacaccggcgcggcggcctctcgcccgacctcgatgacgagctcgcgccc
cgcctgctgcgccacggcgacctcgagaagcccaagggcaagcggcagtgcaagaccaag
cacatcggccaccgcgagcttaggatgctcgcggccaatgaggaaagccctgagcttagc
cccgcccacccgctcaaggttgcgaagcactctccgtcggactgcctcggcccccctccg
gtcatccagcgcaccccctcgccctcatctcccgccgcccctccctcgccccccctccag
cctgctgcggcagcggcgctggttgctgtggtcaccccagcgcccgccctggtgccctcg
gagccgcctgccagccgccccatgccccctgaagcccgccggctcatagtcaacaaaaac
gccggcgagaccctgctgcagcgcgccgcgcgcctcggctacgaggaggtggtgttgtac
tgtttggagaataaggtgtgtgatgtgaatcatcgtgataacgcaggttattgtgcgttg
cacgaggcgtgtgctcgaggctggttcaccatcgtccagcacctgctgcagcatggagca
gacatcaactgcagcgcacaggacggcaccaggcctctgcatgacgcggtggagaacgat
cacctggacatcgtacggctcttgctgtcgtacggcgccgaccccacgctggccacctac
tccggacgaggcctgctgaagatgacccacagtgacatcatggaggggtttctgtctgat
tattttgcagacctgcagggtcgagcggacgatgaccccggtgtgtattgggagttctat
ggcagtgcagtgtgtgaacctggggatgaccctgcagcgtttgatatcctggccgacccg
cccggtcccgaggacgaggaggacgaccacagagaggtgtttgagtttgagttctctgac
cggccgctgctgccctgctacaacatccaggtctctctgtctcaggggcccaggaactgg
ctgctgctctctgacgttctgaagcgtttgaagatgtcggcgaggactttccgctccacg
ttctcccacattgaggtggtgaccatcgcagaggccgagttctacaagcaggtgtcgctc
agccagctgttctcctgcccggaggagctggacgggttcctgcccgacagtaaggagcta
ctggaccttgttgagatcagcgcggagctagtcgccctactcggatcatcactcgagtac
ctggacgaccggtgggagccgtctgtctttaagccacggttgtga

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