KEGG   Astyanax mexicanus (Mexican tetra): 103028142
Entry
103028142         CDS       T05042                                 
Symbol
cetn2
Name
(RefSeq) centrin-1
  KO
K10840  centrin-2
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103028142 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103028142 (cetn2)
   03036 Chromosome and associated proteins [BR:amex03036]
    103028142 (cetn2)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103028142 (cetn2)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     103028142 (cetn2)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    103028142 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     103028142 (cetn2)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103028142 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH Dockerin_1 EF-hand_14 DUF7645 SurA_N_3 SUB1_ProdP9 MTIP_N SRI DUF5580_M DUF7390 LETM1_RBD MJ1010-like_2nd
Other DBs
NCBI-GeneID: 103028142
NCBI-ProteinID: XP_007228500
Ensembl: ENSAMXG00000014391
UniProt: A0A8B9H1F4 W5L4P9
LinkDB
Position
10:complement(417728..421214)
AA seq 172 aa
MATSAKRPSLGAAAPRKKTSPKPELTEEMKQEIREAFELFDTDGSGHIEVKELKVAMRAL
GFEPKKEEIKKMIADVDKDGTGKISFNDFLTIMTQKMAEKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNQQEFLRIMKKTCLY
NT seq 519 nt   +upstreamnt  +downstreamnt
atggccaccagcgctaagagaccgtctctcggagccgcggctccccgaaagaaaaccagc
cctaaacccgaactgaccgaggagatgaagcaggagatccgagaagctttcgagctgttt
gatactgatggttccggtcacatcgaggtgaaagagctaaaggtggccatgagagctctc
gggttcgagcccaaaaaggaggaaataaagaaaatgattgcagatgtggataaagacgga
accggcaagatctccttcaacgactttctcacaatcatgacccagaaaatggctgaaaaa
gattcaaaagaggaaattctaaaggccttcagactgtttgatgacgatgaaactggaaag
atatcgttccgtaacttaaagcgagtcgcaaaagagctcggagagaacctcaccgacgag
gagcttcaggagatgattgatgaagcagatcgggacggtgatggagaagtgaaccagcag
gaatttctccggatcatgaagaagacttgtttgtactga

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