Astyanax mexicanus (Mexican tetra): 103028157
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Entry
103028157 CDS
T05042
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103028157 (tmc2a)
03037 Cilium and associated proteins [BR:
amex03037
]
103028157 (tmc2a)
Transporters [BR:
amex02000
]
Other transporters
Pores ion channels [TC:
1
]
103028157 (tmc2a)
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103028157 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
103028157
NCBI-ProteinID:
XP_022523557
Ensembl:
ENSAMXG00000006525
LinkDB
All DBs
Position
1:complement(19027062..19047250)
Genome browser
AA seq
903 aa
AA seq
DB search
MPKKSDNTRKLEDVGIEIDGDPDSADEVKNTKSKGGGKKPTGKRGKADDSEDGEDEDEDD
KPQKARRANRRKAAQQQPEEEDSDDEIPQRRAAGNRRRGKPGANGGENGENKRNKRGGKK
QKEGKGKGGGKKKSSSEDSKSEGGDEEEESMSEGERARLMEEVEEKKKLIANIRNKPWRM
KRRLKHLKEAQLFVDKFEGALGKGKGRKLYAYKVMMMKKWIKFQRDFDNFKTACIPWERK
IKEVESHFGSSVASYFIFLRWMYGMNLVLFSLTFGLVVIPEVLMGLPYGSIARKTVPREE
QDSAMDYSVLTDFNGYCKYSVLFYGYYNNQRTIGFLKFRLPLSYLMVGIGTFGYSLMVVI
RTMAKNADVGGGDGEDSEFTFAWKMFTSWDYLIGNAETADNKYASITTSFKESIVDEQEN
QKDENIHLRRFLRVLANFLITCTLGGSGYLIYFVVKRSQEFQNMDDLGWYEKNELEIIMS
LLGLVGPMLFETIAELEEYHPRIALKWQLGRIFALFLGNLYTFLLALFDEVNAKLEEEQE
IKNASIWFTKEYYANYTLNNPNDTGTPPPMDPADVIRGPCWETTVGIEFVKLTVSDIQVT
YLTILIGDFLRAMIVRFLNYCWCWDLEAGWPSYGEFDISGNVLGLVFNQGMIWMGAFYAP
GLVGINVLRLLTSMYYQCWAVMACNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTI
MSLPPSFDCGPFSGKERMFDVIIETIELDLPSFLGTLFTYAANPGLIIPAILLMVLAIYY
LNSVSQAYQNANLELKKKMQMARDEEKNRRNNKDSTNQVMKDLEDLLPNRSNLPPAEEAK
DKHEEKKAKVKPGAAGNGVNLQKDVSLASANPNARGPVTQAPGPRAPGPGAGRGRGQGPP
PRR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaaaagcgacaataccaggaaattagaggatgttggtatagagattgatgga
gatcctgacagtgcagatgaggtcaagaataccaaaagcaaaggtggagggaaaaaaccc
acaggcaaacggggcaaagcagatgacagtgaggatggcgaggacgaggatgaagatgac
aaaccgcagaaagctcgcagagccaacaggagaaaagcggcccagcagcagccggaggag
gaagacagcgatgatgaaattccgcagcggagggccgctggaaaccggaggagaggcaag
cctggagcgaacgggggtgagaacggggagaacaagagaaacaagagaggcggcaagaaa
cagaaggagggcaagggcaaaggcggtgggaagaagaagagcagtagtgaggactcaaag
tcagaggggggggacgaggaggaggagtccatgtcagagggggagagggcccggctaatg
gaagaggtggaggagaagaagaagctgatcgcaaacattaggaacaagccctggcggatg
aagaggaggctcaaacatctcaaggaagcacagttgtttgtggataagtttgagggggct
ctgggtaaaggaaagggcaggaaactctatgcctacaaagtaatgatgatgaagaaatgg
atcaaatttcaaagagattttgacaatttcaagactgcctgcattccatgggagcggaaa
ataaaagaggtggagagtcactttggctcttcggttgcctcttactttattttcctccgg
tggatgtatggcatgaatctagtactcttcagtttgacctttgggctggtcgtaatccca
gaggttctaatgggcctaccctatgggtccattgctcgaaaaacagttccacgggaagaa
caagactcggctatggattactccgtgcttacagactttaatgggtactgcaagtattcg
gtgttattctatggctactataataaccagagaacaattggcttcctgaagttccgtctc
cctctgtcctacctgatggtgggcattgggaccttcgggtatagcctgatggttgtgatc
cgaacgatggctaaaaacgcagacgtggggggcggggacggcgaggacagtgagttcacc
ttcgcctggaagatgttcaccagctgggactatctcattggcaacgcagagacggccgac
aacaagtatgcctccatcaccaccagtttcaaggaatcaatagtggacgaacaggagaac
caaaaagacgagaacattcacctgaggaggttcctgcgtgttctggccaacttcctcatc
acctgcaccctgggaggcagcggctatctcatctactttgtggtcaaacgttctcaagaa
ttccagaatatggatgatctaggatggtacgagaaaaatgagttggagattatcatgtct
ctgctgggactggtgggccccatgctgtttgaaaccattgcagagctggaggaatatcac
ccccgtatcgccctcaagtggcagctcggacgcatttttgcccttttcttgggtaacctc
tacactttcctgctggctctattcgatgaggttaatgcaaagctggaggaagaacaggaa
ataaagaatgccagcatctggttcacgaaggagtactacgccaactacactttaaataac
cccaacgatactggcacaccaccccccatggaccctgctgacgtcatccgtggtccatgc
tgggagacaacagtggggatagaatttgtgaagctgactgtctcagatatccaggtgacc
tacctgactatactcatcggagacttcctaagagctatgattgtacgcttcctcaactac
tgctggtgctgggacctggaagcaggctggccttcctatggtgagttcgacatcagcggc
aatgtcctcggattagtcttcaatcaagggatgatctggatgggagcgttttacgcccct
ggactcgtgggcatcaatgttcttcgtcttctgacctccatgtactaccagtgctgggct
gtcatggcctgcaatgtacctcacgagagagtcttcaaagcctccaaatccaacaacttc
tacatgggcctccttctcctcatcctcttccttagtctgctgcctgtggtctatacgatc
atgtcactacccccatcattcgactgtgggccctttagtggcaaggagagaatgtttgat
gtgattatagagaccatagagctggatctaccttcatttttggggacgctgttcacctat
gcagcaaacccgggcctcattatcccagctattctactgatggttctggctatttactac
ctgaactcagtgtctcaggcctatcaaaatgcaaacttggagctgaaaaagaaaatgcag
atggcgagagacgaggagaagaacaggcgaaataacaaagacagcactaatcaagtgatg
aaagatctggaggacttattacccaaccgctccaatttgcccccagccgaggaggcgaaa
gacaaacatgaggaaaagaaagctaaagtgaagcctggagcagctggtaacggtgtgaac
ctgcagaaggacgtgtcactagcatcggctaatcctaatgcccgaggacctgtgactcag
gctccaggacccagggcaccaggacctggggccggccgtggcagaggacaggggccacca
ccaagacgctag
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