Astyanax mexicanus (Mexican tetra): 103028180
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Entry
103028180 CDS
T05042
Name
(RefSeq) zinc finger protein GLIS1 isoform X1
KO
K09232
zinc finger protein GLIS1/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028180
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
103028180
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Ortholog
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GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
FOXP-CC
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
103028180
NCBI-ProteinID:
XP_022525959
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All DBs
Position
12:6740391..6889612
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AA seq
881 aa
AA seq
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MNMHAAESELRALDSALRVCARWRRAAGDGQSLQQTTPRRAPDPASFHAREPQSDAFQMR
APGERTAILSTERYGEESSARRHMEDHVNGGRVSFRPEEDGGSELAGEECALLHCGQNLP
DLSGTQYNQGAHCDQSTQNLHLQENPQPDSRSTELFQRGLGSSLPISFPVKQEGFGLGAG
TGAGTGASEFSVARGGEPNEDRSRVSAAGISSSLSSSSTALTAYVFNNNEGGCGSSLAVS
RHSARLSLSSGGLKRRRLPMASQSDSINIAAIVRTSQMSILARVNGANGTNPSPPAPSAA
FPQPPTAGYLQPAPAPSPRDPSVSPSTCCLLSLSSSSSSSSSSSVSSCEDPGSMQPGPAD
GLGLLMHSGGQRPSAVLKQEPMDDFSPSEEELFHHQFLSPNRGQQQQQQQQQRTPMPPPY
HLHQYNMGSGTGALLHLHNQQQPQQPPPGPRVSGPAGLQALERDDSSVFNDKQICRWIDC
SAAYDQQEELVRHIEKVHIDQRKGEDFTCFWAGCIRRYKPFNARYKLLIHMRVHSGEKPN
KCMFEGCNKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPY
ACQIPGCTKRYTDPSSLRKHVKIHSAKEQQVRRKLRACPHLEPDTLSECLSVQHLHGPAH
PQHLHCPAPSQHTLNGKDGRSPALGQDIFTGLFAGSSTTSNGAPVELLSNSPHLPPRHPR
LDRDSDGLSGSLLSPGISPLKAAPSPPSALVEKQQNLPSTQQHQQHQLHPHHKPYSTFHS
LPSTEDYRGNFQSCFHFGDNYRVEQNISNVHLPTESHSFSTHQHNGFHTSCSTTSSTGFS
LLPDLSGTVSQFTPSPEDSVFFQLGSFERSLSQMNSVYTET
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcacgcggcagagtctgagctgcgcgcgctggactccgcgcttcgggtgtgt
gcgcgttggagacgcgcggccggcgacgggcagtcgctccagcagaccacgccgaggcgc
gctcctgaccccgcatccttccacgcgcgagagccgcagtccgacgcgttccagatgcgc
gctcccggtgagaggaccgcgatcctgtccacggagagatatggcgaggagagcagcgcg
aggagacacatggaggatcatgtgaatggagggcgagtgtctttccgtccagaggaggat
ggcggctctgagcttgcgggagaggagtgtgctttattacactgtgggcagaatcttcct
gacctttcaggaacccagtacaatcaaggagcccactgtgatcagagcacacagaacctc
catttgcaggaaaacccacagccggactccaggtctacagagctgtttcagcggggtctc
ggctccagcctgcccatcagcttccctgtcaagcaggagggattcggcttgggagcggga
acgggagcgggaacaggagccagcgagttttcagtagcaagaggcggagaaccaaacgaa
gaccgtagtagagtgtctgcagccggaatttcgtcctccctgtcgtcgtcctccacggct
ctgacggcgtacgtgtttaataataatgaaggcggctgcggctcctccctggctgtctct
cgtcactcggcgcggctctcgctgagctccggcggcctgaagaggcgccgcctgcccatg
gcctcacagtccgacagcatcaacatcgccgccatcgtacgcacctcccagatgtccatc
ttagcgcgtgtaaacggcgcaaacggcaccaatccctccccaccggcccccagcgctgcc
ttcccacagccgcccactgcggggtacctgcagcctgcacccgctcccagccctcgggac
ccctcagtctcaccctccacctgctgcctgctgtctctctcctcatcctcatcctcctcc
tcttcatcctctgtatcttcgtgtgaggatccgggctccatgcagcctgggccagctgac
ggcctcggtttgctcatgcactctgggggtcagcgaccatccgcggttttgaaacaggag
ccaatggacgatttctctccgtctgaggaggagctttttcaccatcagtttctttcaccc
aaccgtggacagcagcagcagcaacagcagcagcagcggacccccatgcctcctccgtac
cacctgcaccagtataatatgggctccggtacaggtgcactgctgcacctgcacaaccag
cagcagcctcagcagcctccacctggacccagagtctcaggcccggctggcctgcaagcc
ctggagcgggacgactccagcgtttttaatgataagcaaatatgccgatggatcgactgc
agtgctgcatatgaccagcaggaagagctggtgaggcacatcgaaaaggtgcatattgat
cagaggaaaggcgaggacttcacttgcttctgggctggatgtatccgccgctacaagcca
ttcaacgctcgctacaagctgcttatccacatgagggtccactctggagagaagcccaac
aagtgtatgtttgaaggctgtaataaggctttttctcgtttggaaaatctgaagattcac
ctgcggagtcacactggagagaagccgtatctgtgccagcacccgggctgccagaaagct
ttcagcaactccagcgacagagccaagcaccagcgcacacacctggacactaaaccgtac
gcctgtcagatccccggctgcaccaagcgctacacggaccccagctctctacgcaagcac
gtcaaaatccactcagccaaagagcagcaggtgcgtaggaagctaagagcctgcccacat
ctggagccggacactctaagcgaatgtctgtctgttcagcacctacatggccctgcccac
cctcagcatctgcactgccccgccccctcacagcacacacttaatggaaaggatggtcgt
tcccctgccctgggccaggatatctttacaggcctgtttgctggctccagcacaacgtca
aacggagccccagtggagctgctctctaacagccctcacctgcccccgcgacacccccgc
ctggaccgggacagcgacgggttatccggttctttgctgtctcccgggattagtcctctg
aaggcggctccgtctcctccctctgctctggtggaaaagcagcagaacctgccctccacc
caacagcaccagcagcaccagctccatccacaccacaagccctactctaccttccacagc
ctccccagcactgaagattaccgaggaaacttccagagctgcttccactttggggataat
tacagagtggagcagaacatcagcaacgtccacctccccactgagtcccacagcttcagc
acacaccaacacaacggcttccacaccagctgctccaccacatcctccacaggtttcagt
ttgttgccggacctcagtgggacagtgtcccagttcaccccgagcccagaggacagcgtt
ttcttccagctgggcagcttcgagcgcagcctgagccaaatgaactctgtatataccgag
acgtag
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