Astyanax mexicanus (Mexican tetra): 103028194
Help
Entry
103028194 CDS
T05042
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103028194 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103028194 (mbd4)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103028194 (mbd4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
103028194 (mbd4)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103028194 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Clr2_transil
Motif
Other DBs
NCBI-GeneID:
103028194
NCBI-ProteinID:
XP_007238344
LinkDB
All DBs
Position
6:complement(45537810..45547163)
Genome browser
AA seq
406 aa
AA seq
DB search
MLKTCSEIGGSLVVTQMYSWIWLDSVCCTKRMTTQGLPSGWTRETRQRKRGKTAGKVDTY
IISPEGRRFRSKSQLQNYLQSDECADSHLELEMFDFTSPKHYSEAAQQQESKAGRQRSLK
QKKKPVDSPNPEPQDGVVTENGRIKTEKKRRNQTKRHEENGLGEETENRNIKTEDELPSV
SSAPALTVQPASESEGENVEELERKERDAVKEEQMSNEATGGSYSPARNTNSGTKLLAEK
RRTSPYFTRKSDGLSPPRRKALRKWTPPRSPFNLVQETLFHDPWKLLVATIFLNKTSGKA
AIPILWQFLERYPSAEVTRASEWEPIAELLQPLGLNTLRAKALIRFSDEFLTKSWRYPIE
LHGIGKYGNDSYRIFCLGEWREVTPEDHKLNDYHTWLWKNHQQLGL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaacatgcagtgaaattggtggctcattagttgtaactcaaatgtacagttgg
atttggctagattctgtgtgttgcactaaaagaatgaccacacagggtctcccttctggc
tggaccagagagacaagacagaggaaacgggggaagacagcaggaaaagtggacacctac
atcatcagtcctgaaggcagacgctttcgatccaagtcgcagctccagaactacctgcag
tcagatgaatgtgctgattctcacctagagctggagatgtttgactttacttcacccaaa
cactacagtgaagcagctcagcagcaggaaagtaaagcaggaaggcagagaagcttaaaa
cagaaaaagaaacctgtggatagccctaatccagaaccacaggatggagtagtgacagaa
aatggaagaatcaaaacggaaaagaaaaggaggaaccagacaaaacggcatgaagaaaac
ggactcggagaggaaacggaaaacagaaatattaaaacggaggatgagttacccagcgtg
tcttcagcaccagcactaacagtacagcctgcctcagagagtgaaggagagaatgtagaa
gagctggagagaaaggagagagatgcagtaaaagaagaacagatgagtaacgaggccaca
ggggggagctactcgcctgccagaaacacaaacagcgggacaaagttgttggcagagaag
aggagaaccagtccttactttactagaaagagtgatggtctcagtcctccaagacgcaaa
gcattaagaaagtggactccaccacgttcccctttcaatctggtccaagaaaccctgttt
catgatccctggaagcttttagtcgccaccatcttcctcaacaagaccagtggaaaggca
gcaattccaatactgtggcagtttttggagcgttacccatctgctgaagttaccagagcc
agtgaatgggaaccgattgctgagttactgcagcctctcggtttaaacactcttcgagcc
aaagcactcatacgcttctctgatgagtttctcactaaatcatggagatatcccattgag
ttgcatggaattggaaaatatggtaatgactcctaccggatattttgtttgggagaatgg
agagaggtcactcctgaagaccacaagctgaacgactatcacacctggctctggaagaac
caccagcagttaggactctga
DBGET
integrated database retrieval system
