Astyanax mexicanus (Mexican tetra): 103028194
Help
Entry
103028194 CDS
T05042
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103028194 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103028194 (mbd4)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103028194 (mbd4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
103028194 (mbd4)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103028194 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Clr2_transil
Motif
Other DBs
NCBI-GeneID:
103028194
NCBI-ProteinID:
XP_007238344
Ensembl:
ENSAMXG00000017271
LinkDB
All DBs
Position
12:15116307..15126665
Genome browser
AA seq
390 aa
AA seq
DB search
MYSWIWLDSVCCTKRMTTQGLPSGWTRETRQRKRGKTAGKVDTYIISPEGRRFRSKSQLQ
NYLQSDECADSHLELEMFDFTSPKHYSEAAQQQESKAGRQRSLKQKKKPVDSPNPEPQDG
VVTENGRIKTEKKRRNQTKRHEENGLGEETENRNIKTEDELPSVSSAPALTVQPASESEG
ENVEELERKERDAVKEEQMSNEATGGSYSPARNTNSGTKLLAEKRRTSPYFTRKSDGLSP
PRRKALRKWTPPRSPFNLVQETLFHDPWKLLVATIFLNKTSGKAAIPILWQFLERYPSAE
VTRASEWEPIAELLQPLGLNTLRAKALIRFSDEFLTKSWRYPIELHGIGKYGNDSYRIFC
LGEWREVTPEDHKLNDYHTWLWKNHQQLGL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtacagttggatttggctagattctgtgtgttgcactaaaagaatgaccacacagggt
ctcccttctggctggaccagagagacaaggcagaggaaacgggggaagacagcaggaaaa
gtggacacctacatcatcagtcctgaaggcagacgctttcgatccaagtcgcagctccag
aactacctgcagtcagatgaatgtgctgattctcacctagagctggagatgtttgacttt
acttcacccaaacactacagtgaagcagctcagcagcaggaaagtaaagcaggaaggcag
agaagtttaaaacagaaaaagaaacctgtggatagccctaatccagaaccgcaggatgga
gtagtgacagaaaatggaagaatcaaaacggaaaagaaaaggaggaaccagacaaaacgg
catgaagaaaacggactcggagaggaaacggaaaacagaaatattaaaacggaggatgag
ttacccagcgtgtcttcagcaccagcactaacagtacagcctgcctcagagagtgaagga
gagaatgtagaagagctggagagaaaggagagagatgcagtaaaagaagaacagatgagt
aacgaggccacaggggggagctactcgcctgccagaaacacaaacagcgggacaaagttg
ttggcagagaagaggagaaccagtccttactttactagaaagagtgatggtctcagtcct
ccaagacgcaaagcattaagaaagtggactccaccacgttcccctttcaatctggtccaa
gaaaccctgtttcatgatccctggaagcttttagtcgccaccatcttcctcaacaagacc
agtggaaaggcagcaattccaatactgtggcagtttttggagcgttacccatctgctgaa
gttaccagagccagtgaatgggaaccgattgctgagttactgcagcctctcggtttaaac
actcttcgagccaaagcactcatacgcttctctgatgagtttctcactaaatcatggaga
tatcccattgagttgcatggaattggaaaatatggtaatgactcctaccggatattttgt
ttgggagaatggagagaggtcactcctgaagaccacaagctgaacgactatcacacctgg
ctctggaagaaccaccagcagttaggactctga
DBGET
integrated database retrieval system
