Astyanax mexicanus (Mexican tetra): 103028226
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Entry
103028226 CDS
T05042
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04136
Autophagy - other
amex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103028226 (wipi2)
04136 Autophagy - other
103028226 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103028226 (wipi2)
03029 Mitochondrial biogenesis [BR:
amex03029
]
103028226 (wipi2)
Membrane trafficking [BR:
amex04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
103028226 (wipi2)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103028226 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
BCAS3_WD40
DUF7099
Beta-prop_IFT140_1st
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
103028226
NCBI-ProteinID:
XP_007247875
Ensembl:
ENSAMXG00000009985
UniProt:
A0A8T2M9N3
W5KRP3
LinkDB
All DBs
Position
3:complement(54847483..54857779)
Genome browser
AA seq
425 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAQVSEMFTQGR
AFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLDGS
AEPANEILDQTAHERPLVAQTYSAAVAKGYSEDQGAVGGAGVEDDMNALHLDEENEQPPL
ILETD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggggaggccggctgcagccagctcctcttcgccaacttt
aaccaggataacacatccctagcagttggtactaaatctggatacaagtttttctctttg
tcatcggttgacaaattggagcagatttatgaatgtaccgacactgaagatgtgtgcatc
gtggaacgactgttctccagtagccttgttgctattgttagccttaaggcgcctagaaag
ctcaaagtgtgtcacttcaagaaagggacagagatatgtaactacagctactcaaacact
atactggctgtaaaactcaacagacagagattgatagtatgtctggaagaatcactgtat
atccacaacatcagggatatgaaagtactacataccattcgagaaactcctccaaatcca
tcaggattatgtgcactttcaatcagcaatgacaactgctatttggcatatccaggaagt
gcaacaataggggaagtgcaagtttttgacactgttaatttgagggctgctaacatgatt
cctgctcatgacagcccactagcagcactggcatttgatgcaagtggtacaaaactagcc
acagcctcggagaagggcaccgtcatcagagtattctccattccagagggccagaaactc
tttgagtttaggaggggagtcaagagatgtgtaagcatctgctccctggcctttagtatg
gatggactttatctgtctgcctccagcaacactgagacagttcatatctttaagctggag
acacagagagaaaagccacaggaggagcccacgacctggacagggtactttgggaaagta
ctgatggcctccaccacatatctgcctgcacaggtgtctgaaatgttcacacaaggaagg
gccttcgccacagtcagactgccattttcaggacacaagaacatctgtgctcttgctata
atacagaagattccacggcttctggtggcagcagcagatggatacctttacctgtacaac
ctggacccacaggaagggggagagtgcacactaatgaaacagcacaagttagatggaagt
gctgaacctgcgaatgaaattttagatcagacggctcacgaacgcccacttgtggcacag
acctacagtgctgctgttgccaaaggttactctgaggatcagggtgcagtaggcggggct
ggagtggaggacgatatgaacgccctgcatctggatgaagaaaacgagcagcccccctta
atccttgagacggactga
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integrated database retrieval system
