Astyanax mexicanus (Mexican tetra): 103028250
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Entry
103028250 CDS
T05042
Symbol
nr6a1a
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A isoform X2
KO
K08561
germ cell nuclear factor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028250 (nr6a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103028250 (nr6a1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
103028250 (nr6a1a)
Nuclear receptors [BR:
amex03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
103028250 (nr6a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103028250
NCBI-ProteinID:
XP_015456284
Ensembl:
ENSAMXG00000039712
UniProt:
A0A3B1JG54
A0A8B9GVJ4
LinkDB
All DBs
Position
12:complement(28050072..28183269)
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AA seq
460 aa
AA seq
DB search
MNEWQWDRKRHEMDSWEDDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVY
RCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIE
RIMSGQEFKDEANMPEHTWGNNGDSDHSSPGNGVSDGNQPSPASTLSSNRSVELNGYTAA
LREQYIGSAVAQHYQFLPHLFGYTAQPRSLYPQSHTLISQLVAAEELAPLGTPMLIEDGY
RVTQVELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTRLLSATWQELILLACLTVY
SAQILGDLANVTDKYTPSDDELQGFSEDGMEVMEKLIYLFRKFHQLKVSNEEYACMKAIN
FLNQDIRGLTNVSQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVN
VPLEQLPLLFKAVLHSCKTSLNNYRTSSSPCVTKGTAPAN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatggcagtgggatcggaagagacatgagatggattcatgggaagatgaccag
gctgagcagcgctcctgtctcatttgtggagaccgcgccacaggactgcactatggcatc
atctcctgcgagggctgcaagggcttcttcaagcgcagcatctgtaataaacgcgtgtac
cgctgcagccgcgacaagaactgcgagatgtcccgcaagcagcgcaaccgctgccagtac
tgcaggctgctcaagtgcctacagatgggcatgaacagaaaagcaatcagggaggatggc
atgccaggaggaaggaacaaaagcatcggacctgttcagatttccgatgaggagatcgag
cgaataatgtctgggcaggagtttaaggatgaggccaacatgccggagcacacctgggga
aacaatggcgacagcgatcacagttcccctggcaacggcgtctccgatggcaaccagccc
tctcctgcgtctacgctatcctcaaatcgctcagtggagctgaatggctacacagcagct
ttgagagagcagtacatcggcagcgcagtggcccaacactaccagttccttccacacctg
tttggatacacagcacagccccgcagcctgtaccctcagagtcataccctcatcagccag
ctggtggcagcagaggaactggccccactgggcacacccatgctcatagaggacgggtat
cgggtgacccaggtggagctctttgctctcctctgtcgtctggctgatgaactgctcttc
aggcagatctcctggatcaagaagctgccgttcttctgcgagctctccatcgaggactac
acgcgtctgctgagcgccacctggcaggagctcatccttctggcctgcctgaccgtctac
agtgcccagatcctgggtgacctggccaacgtcactgataaatacacaccgtccgatgat
gagctgcaggggttcagtgaggatggtatggaggtgatggagaagctgatctatctgttc
cgcaagttccaccagttgaaggtcagcaatgaggagtatgcctgcatgaaggccatcaac
ttcctgaaccaagatatccgaggtttgacgaatgtgtcccagttggagcagctgaacaag
cggtactggtatgtgtgccaggactacactgagtacaaataccctcaccagcccaaacgc
ttccccgagatcatgatgtgtctcccagagattcgctgcatcgcagggaagttggtcaac
gtccctttagagcagctccccctgctgttcaaggcagtcctgcactcctgtaagaccagc
ctgaacaattacaggacaagctcctccccctgtgtgacgaagggtaccgcccctgccaac
taa
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