Astyanax mexicanus (Mexican tetra): 103028317 Help Entry 103028317         CDS       T05042                                  Name (RefSeq) collagen alpha-4(IV) chain-like   KO K06237   collagen type IV alpha Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04382   Cornified envelope formation amex04510   Focal adhesion amex04512   ECM-receptor interaction amex04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:amex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103028317  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     103028317   09142 Cell motility    04820 Cytoskeleton in muscle cells     103028317  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103028317  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:amex04147]     103028317    00536 Glycosaminoglycan binding proteins [BR:amex00536]     103028317 Exosome [BR:amex04147]  Exosomal proteins   Exosomal proteins of other cancer cells    103028317 Glycosaminoglycan binding proteins [BR:amex00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103028317 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  103028317 NCBI-ProteinID:  XP_049334824 LinkDB All DBs Position 4:54352284..54419033 Genome browser AA seq 1653 aa AA seqDB search MKLLTCRIRFLILTLWWISLLFLSEQQVHVGETLEPCNGRDCSVCRCHPAKGAQGNPGKL GAQGPQGESGPRGPPGRPGEKGRQGVQGDPGVEGYPGDRGRTGTPGFPGIDGVNGHPGAG GLPGPAGPDGCNGSRGDPGPPGQPGYWGVPGLNGAPGPKGFKGEPTVVSIAGLPGNPGLP GPHGPPGLPGIDGLPGAKGQPGPAGFIGPAGDPGPQGPPGDGGRSLPGPKGNEGEPGLPG PPGPEEVVNPPVDNLIKGAKGEKGDTGVCGPDGPDGNSGAPGLKGEKGILGMPGSRGLPG IDGLPGLQGSQGAHGDPGAPGHRGRPGLKGEIGDPGLRGPPGDHLNMPPGYPGDPGPRGP PGPPGDYGLMGDPGPSGQRGQTLPGPPGPPGLPGPEGPRGYKGDPGLLNVVESDPGLAGS PGSAGFPGIKGVRGPPGQSGFCNPGLPGLPGDKGESGFPGGSGYKGQKGCPGDNVCSPDG SDALGIPGPPGPPGFNGFPGAKGPSGEQGPQGHPGPAGPHGPPGLPGPQGFKGHKGDPYY STIGGIKGDRGDPGFTGPQGVSGQPGLPGQHGLIGDPGAPGDGYPGSKGYKGHPGHPGPK GYPGPAGLPGIGVPGPSGPPGLPGDQGPEGPPGFIGHPGPPGEVLPCVPGVPSRPGPPGE TGSPGLSGPPGPPGYQGPPGPHGPKGERGDDADSGGHGPPGPPGIPGDPGDQGPPGRSYS GAAGVPGPPGPPGAKGPPGDSLRGRPGLPGRGFPGRPGEKGSLGPPGPNGLQGQPGRTGG EGCSGRKGDAGDPGPPGPPGTSPGLPGFPGLPGLPGQHGIQGVKGDQGLPGFPGLGLKGP PGSPGRPGPPGEAGFPGLKGMPGEQGLPGLSGIKGIRGRPGIPGLIGLPGHQGPPGPPGL PGVRGDEGYKGATGDEGQKGSKGIDGIPGPPGLLTPLKGMRGLPGSNGRPGFTGPRGYKG VPGSPGKHGVNGVDGGPGFQKGYPGLPGRSGPQGPPGPPGPKGYPGVMGFPGTFGDQGDP GLPGLNGAPGNQGFPGIKGDQGDSVGIPGPQGPKGVQGDNGPKAEKGAVGDPGDHGPQGP RGLPGPPGSPGPSGPPGRQGTTGLPGFSRFGLPGPPGSPGSPGLKGYPGLPGQKGYTGPP GLDGLNGLPGNKGERGATGSGLPGPPGITGDPGDQGLPGSPGVPGISHLGQKGFTGPPGD PGPPGTFGPPGLPGRNCERPIPGLTGDPGPNGLYGPPGPPGEIGPPGPVFPVSGDPGDVG LPGHRGPKGLRGTDGPPGRPGYDGPPGPKGIPGSPGLIGPQGPAGLMGRPGLPGLKGDKG IIGNMGFKGQPGEVIRAPPPYRVGPQGKPGPPGPPGSSGIPGLSGNPGPIGLKGLRGNRG PTGHEGNPGHAGLRGDAGDVGPQGFIGPQGLPGPQGDPGFPAPGVTVNSGFLLVIHSQSE VIPECPVGMPLLWSGYSLLYLEGQERAYTQDLGQAGSCLKIFSTMPFSYCNSASCKYASR NDKSYWLTTNRPVPMMPVAGGEIHQYISRCVVCEAPGPAVALHSQDSSVPSCPSGWQGLW IGYSFLMHTGSGDEGGGQSLTSPGSCLKDFRTQPFVECQGPRGTCHYFANIYSFWLTRVS YPEELGEAPPTQTLKAADQQRDRTSRCHVCMKR NT seq 4962 nt NT seq  +upstreamnt  +downstreamnt atgaagctgctgacctgcaggattagattcctaatccttaccttgtggtggatcagtctg ctcttcctctcagaacagcaggtccacgtgggtgaaacactggagccgtgtaatggcaga gactgctctgtgtgcagatgccacccggccaaaggagctcagggaaatccaggtaagctg ggtgcacagggtcctcagggtgagtcaggacctcggggtccaccgggacgtccaggagag aaaggaagacaaggagttcagggagacccgggggtagaggggtatccaggagacaggggt cgtaccggtaccccaggttttcctggaatagacggcgttaatggacaccctggtgcagga ggtcttcctggtcctgcaggtccggatggctgtaatgggtctcggggggatccaggccct cctgggcagcctgggtattggggagtacctggattaaacggagctccaggtcccaaaggc tttaagggggagccaacagtggtgtccattgcaggattaccgggaaaccctggcctgccc ggtcctcacggcccacctggattacctggcattgacgggcttcctggtgctaagggtcaa cctggtccagctggatttattggtcctgctggtgatccagggccacagggacccccgggt gatggtgggagatcacttccaggtcctaaaggaaatgagggagaacctgggttgccaggt cctcctggaccagaagaagtggtgaaccctcctgtggacaatctcattaaaggagcgaag ggggagaagggggatacaggagtctgtggaccagatggaccagatggaaattcgggagcc cctggtctgaaaggagagaagggaattctgggaatgcctggctctcggggtttaccaggt attgatggccttcctggacttcaaggttcacagggagctcatggagacccgggagcacct ggtcatcgtggtcgtcccggtctgaagggtgaaataggtgatcccggtttgaggggtcct ccaggtgatcatctcaacatgccaccaggttatccaggtgacccaggaccacgtggacca ccaggacccccaggggattatggactgatgggagatccaggaccatctggacagagagga cagaccctcccgggtcctccaggtcctcctggactgccgggtcctgagggacccagaggt tataagggagaccctggtttgctgaacgttgttgaatcagatcctggacttgctgggtct cctggatcagctggttttccagggatcaaaggagtcagaggaccacctggccaatcaggc ttttgcaaccctggacttccagggctgcctggagataaaggggagagtggatttcctgga ggaagtggatataaggggcagaaaggctgtcctggagataatgtttgcagccctgatgga tcagatgcgctcggcattcctggaccacctggacccccaggatttaatggctttcctgga gcaaaagggccaagtggtgaacaggggcctcaaggacacccaggtccagctggcccccat ggacccccaggtctgcctggtcctcagggatttaagggccacaaaggagacccttattat tcaacaataggaggcataaaaggagatcggggtgatccagggtttaccggaccacaaggt gtcagcgggcaaccagggcttccaggacagcatggtttgattggagacccaggagcacca ggtgatggttatcctggttccaaaggatacaaaggacatcctggacatcctgggcctaaa ggatacccaggacctgcaggacttccaggtataggtgttcctggtccaagcggaccacca ggactaccaggagaccagggcccagaaggtccacctggatttattgggcatccaggacca ccaggggaagttcttccatgcgttcctggtgtccccagccgaccaggaccaccaggtgaa actggcagtccaggactgtctggaccaccaggaccaccaggatatcaaggccctcctggt ccacatggtccaaaaggtgaaagaggagatgatgcagacagtggagggcatggacctcca ggtcctccaggaattcctggagatccaggagatcaaggaccccctggacgcagctacagt ggtgcagcaggagtaccaggaccaccaggacctccaggggcaaagggacctccaggggat tctctcagaggtagaccgggattacctggaagaggattccctggacgcccaggtgaaaag ggaagtctaggtcctccaggccctaatggattacaaggacaacctggtcgtactggaggt gaaggatgcagtgggcgaaaaggagacgctggggacccaggcccacctggaccaccagga actagtccaggcctccctggattcccaggacttccaggactgccaggacagcatggcatt caaggtgtgaaaggagatcagggactacctgggtttcctggacttggactgaagggacct cctggctcacctggacgacctggtccccctggtgaagctggatttcctggtctgaaagga atgcctggagaacaagggctgcctgggctttctggaattaaaggaatcagaggacgtcca gggattcccggattaataggtctacctggacaccaaggtcctccagggccaccaggttta ccaggggtgagaggtgacgagggttacaaaggtgcgacaggggacgagggccagaaagga tcgaaaggtatcgatgggattccaggacctccaggtcttttaactcctttaaaaggaatg aggggattacctggatccaatggaagaccaggattcacgggaccgagaggatataaaggt gttccaggctcaccaggtaagcatggtgtgaatggagtggatggtggccctggttttcag aaaggctatcctggcttacctggaagaagtggccctcaggggccaccagggccacctgga cctaaaggatatccaggagttatgggattcccagggacatttggagatcagggtgatcca ggtcttcctggactgaatggagctccaggtaaccagggatttccaggaattaaaggtgac caaggagactccgtaggaattccaggtccacaaggaccaaaaggggttcagggtgacaac ggaccaaaagctgagaaaggagctgttggggacccaggagaccatggaccccaaggccca aggggacttcctggtccacctggatctcctggaccatcaggtccacctggtcgtcaagga actacaggtcttccaggtttttcgcggtttggtcttcctggtcctccaggttctccggga tctccaggtcttaaaggttatccaggactgccaggtcagaaaggatacacaggacctcca ggactggacggtctgaatggtcttcctggtaataaaggagaaagaggcgcgacaggttct ggtcttccaggacctccagggataacaggtgatcctggagaccagggactacctggttcc cccggagttccaggaatctcccatctaggacagaaaggctttacaggcccacctggagac ccaggtccccctggtacctttggtcctcccggccttccaggtagaaactgtgaacgacca attccaggactcaccggcgatccaggaccaaatggactttacggacctccaggtccacca ggagaaatcggacctccaggtccagttttccctgtttcaggagaccctggagatgtggga ctaccaggccacagaggaccaaagggcttgagaggtacagatgggcccccagggcgccct gggtacgatggaccaccaggacccaaagggattccaggatcacctggtctgattggccct cagggaccagcaggtcttatgggcagacctggtctcccagggttgaagggagataaaggg atcattgggaacatgggtttcaaaggtcaacctggtgaagttataagagcccctccaccg tacagagtgggaccacaaggaaagcctggaccacctggaccaccagggagctcaggaata ccaggactttcaggaaaccccggacccatagggctaaaaggtctgagggggaaccgtggt ccaactgggcatgaaggtaatccagggcatgcaggtcttcgtggagatgctggagatgtt ggaccacaaggattcattggaccacaaggtctaccaggtcctcagggagaccctggattc ccagctccaggagtaacggtgaactccgggtttctcctggtgatccacagtcagtctgag gtgatacccgagtgtccggtgggcatgcctctgctctggagtgggtacagtcttctttat ctggagggtcaggagagggcgtacacacaagacttgggccaagccggctcatgtctgaag atcttcagcaccatgcccttctcctactgtaactccgcctcctgtaaatacgccagccgc aacgacaaatcctattggctgaccactaacagacccgtgcccatgatgccggtggcgggt ggagagatccaccagtacatcagccgctgtgtggtttgtgaggctccgggtccggcggtg gcgctccatagccaggactccagcgtgcctagctgcccctccggctggcaaggtctgtgg attggctactcgttcctcatgcacaccggctcaggtgatgaaggtgggggtcagtctctg acctctcctggaagctgcctgaaggacttcaggacgcagcccttcgtggagtgccagggc ccgcgtggcacgtgccactactttgccaacatctacagcttttggttgacccgcgttagc tacccggaggagctcggcgaggcgccgccgacgcaaacgctgaaggctgcggatcagcag cgcgaccgtaccagccgctgccacgtctgcatgaagcggtga

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