Astyanax mexicanus (Mexican tetra): 103028327
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Entry
103028327 CDS
T05042
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103028327 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103028327 (rsf1b.1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
103028327 (rsf1b.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
103028327
NCBI-ProteinID:
XP_049324499
LinkDB
All DBs
Position
20:complement(4694037..4712158)
Genome browser
AA seq
1922 aa
AA seq
DB search
MAASAAAAGSSPGLCPSFAVICSFLERYGAQLDLPELTFPQLERYLEETTAVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVRICQEFNTTWAWELEKKGYLEMTVECKTGILKYLCECQF
DDNVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRDDLAQILGLLKTQIDPALLVKKDQEEGSSSNSPNPEDEENKKKDDGEVKEENDLEV
EKSKDACPVSPKTEKEGQPSEKADLKQETTENNEALKDKTDVKEENKNQSDKPVEKDGII
IRTIKEEPMEEDPKTLAESPPEKSCGAPSEPAEDLQKKPSEEVQRAIKNDQQAKIPLKKR
GMKRSEDFETTNCGSGSSSIIVRNPAVAVIKETQAANEENAVNGDKLNGDISSEIKKISE
IKQKETVQPEKSKDQHKEPSVKEAKNQHSETEEIKKTEEPSKDKEKKQKEESVKKDETQT
SVEEPMEVDKPDGTTAMKADQETQPKQQEAAAEKTSKHEEPSQTPTDVEKTSQTTEKNSQ
PSSTDVAAESSDSSPKIKPEESSKMDTTDQSEPEKIIPVTSNKSPKELEPCLKKVEDTKD
VKDQEMKDLSDDVNKTNTPELKEKADSSKELSTLPASMETETTPTSLEKSQASPKTDSST
QEESVKPVAVKETSSDNASVQDHQKSKPDELPEENKLPAIKESQESDALKKETKAVSECT
DISEKEKPPSPKQKDETSTLESSEKASSSDDGKIKCTQSETSKSDQDSKETGSTPTGKES
PALPDVQKKAEDFPSPQEKSKVENENKQMEVTSEDSKKNVDQVSKGSEEVPGQKIQKVPE
IQQEKKDEGKDSVPQTETCKKQDEQDKCPEAKEMSLKEQDKSPESKDKSQKEQDKEKSLE
GQAKSLKKQDKDKSPKEQDKDKSVKDQDKDKSQKEQEKDESPKEQQKDESPKEQEKDKSQ
KEQEKEKSLKEQDKDKSLKEQDKDKSLKDQVKDKSLKEQEKDKSLKEQEKDKSQKEQEKD
KSLLKEQDKDKSSTEQDKSQKEQEKDKSPKEQDKDKSSEGQVKSLKEQAKDKSVKDQDED
KSPTEQDKEKSLDEEKPQKKSKSCKDKTKIDESSVEEKKDEGIEKSSSEETGEKVSEEKK
TETGKKGVKANKEKPSEEPQEGIRIKLKVPVSRRKADLLRDEGKGDSESEASEGRCLRRS
PRICRPSAKVVEIQDRKVEKKQATSLTEKDKDESDEKEEEEITVQKKPRERKVDPEAQNK
PKGRRRKRTCWSNTRTRRKKKGSEDEDDESSSEEEETEEDDSDEDFKVVKSRKRRRNCDR
VKNSDSSTSCSEEELPNDDPCKHCGLPNHPELILLCDSCDNGYHTACLRPPLMIIPDGEW
FCPPCQHKLLCDKLEEQLVNIDAALKKKERAERRKERLVYVGISVENIITPSVEPEEEKE
EEDKVKEKKEVKKVKSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKD
MANITGHRGKDMSTILQEEGKENGRPQRTSTVQRRKKRRRLNDLDSDSTVEEEESEDEFR
LSESSEEEFVASGNAESEAEGQSFDDSDFGSDGCGPAKRMSSRRTAARRRSTRTRRRRRP
RGSSDDEELEDTEEEEDEIVTEGSSDYSENDLDMRRRRSHRSRKQQVNYRETSDSDGSQT
SKNKDKQKSRRRLSSSESEASFNSADSEEDARKSKKRKADSSEEDSRKRRRPQTLKRRRE
SEEDDDDDDDDDDSDESEEEDRPVRKRVNRIDSDDSEEEEKEEKKEEKESKEEKKTTTTT
TTSTPNAAEKDKDAEKETEAEDVLGKGVGTLDYNLEELPATNGQSPMKSLEGLVPRPAAG
TGNPALVGNVGLKNSSAPPPVAMAANGLAPQEMAPQDEEEDDLLGVTDLVDYVCNSEQLK
DD
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcggcggcgggttcttcccccgggttgtgccccagcttcgccgtg
atctgctcctttttagagcgctacggagctcagctggatctaccggagcttacattccca
cagctggagcgctatctggaggaaacgacggcagttccgaagctcttggtggacctccat
gtaaagttattgaggaagatcggaaagtctgtttctgccgacaggtgggagaagtacctc
gttaggatatgtcaggagttcaacaccacctgggcatgggagctggagaagaagggctat
ctggagatgaccgtggagtgcaagacaggaattctcaagtatttatgcgaatgccagttt
gacgacaatgtcaaattcaagactgccatcaatgaagaagacccagataaaatgcgcctg
cagcccatcggcagggacaaagatgggctcatgtattggttccagcttgaccaggatcac
aatgtgagggtctatgtggaggagcaggatgatctcgatggctcatcttggaaatgcatt
gttagaaatcgagatgatttggcgcagatccttggactattaaagactcagattgatcct
gcacttttagtcaagaaggaccaggaggaggggtcatctagtaacagcccaaacccagag
gatgaagagaacaagaagaaagatgatggagaggtcaaggaagaaaatgatttggaagta
gaaaagtcaaaagatgcatgtcctgtctctcccaagactgagaaagaaggccaaccctca
gaaaaagctgatttaaaacaagaaactacagagaacaatgaagcattaaaagataaaacg
gacgtaaaagaagaaaataagaatcaatctgacaagccagtggaaaaagatggaatcatt
attcgaacgatcaaagaggagcccatggaggaagatcccaaaaccttagcagagtcacca
ccagaaaaaagctgcggtgctccttcagaaccagcagaggatttgcagaaaaagccttca
gaggaggtacagagagcaattaaaaatgaccagcaagctaaaatacccttgaaaaagaga
gggatgaaacggagcgaggattttgagaccaccaactgtggaagtggcagcagcagcatc
attgtgcgtaatccagcagtcgctgtaataaaagaaacccaggcagccaatgaggagaat
gcagtaaacggtgacaagctgaatggagatatctcctctgaaattaagaaaatctcagaa
ataaagcaaaaagaaacagtgcaacctgaaaagtctaaagatcagcacaaagaacccagt
gtgaaggaagcaaaaaatcaacattcagaaacagaagaaataaaaaaaacagaggaacca
agtaaagacaaagaaaagaaacagaaagaagagtctgtgaagaaggatgagacccaaact
agtgtagaagaacctatggaagttgataaacctgatggtaccacagccatgaaagctgat
caggaaacacaaccaaaacaacaagaagctgctgctgagaagacatccaaacatgaagaa
ccttcgcaaactccaacagatgtggaaaagacttctcaaacaactgaaaaaaactctcag
ccatctagtacagatgttgcagcagaatcttcagactcttctccgaagataaaacctgaa
gaatccagtaaaatggacaccacagaccaatctgaacctgaaaaaattataccggttact
tcaaacaagagtcctaaagaattggaaccatgccttaaaaaagtagaagacacaaaagat
gtaaaagaccaagaaatgaaagatctgtctgatgacgtcaataaaacaaatactccagag
ttaaaagagaaagccgattcttctaaagagctgagcacattgcctgcttctatggagact
gagacaacacctacatctttggaaaagtcccaagcctctccaaagacggatagttctact
caagaagagagtgtaaaacctgttgctgttaaagagactagctctgacaatgcctcagta
caagatcaccaaaagtctaaaccagacgagcttcctgaggagaataaactccccgccatt
aaggaaagtcaagaatctgatgctttaaaaaaagagacaaaagcagtgtctgaatgtaca
gacatttcagagaaggagaaaccaccttctccaaaacaaaaggatgaaacgtctacattg
gaatcctctgaaaaagcatcatccagtgatgatggaaaaattaagtgtacacagagtgag
acttctaaatcagatcaagactccaaagaaactggatcaacacctacagggaaggaatca
ccagccctaccggatgtccagaaaaaggcagaggattttccctcacctcaagaaaaatct
aaagtagagaatgagaataagcaaatggaagttacttcagaggactccaaaaagaacgtt
gatcaagtgtccaaaggtagtgaagaggtcccaggacagaagatccagaaagttccagaa
atccagcaggaaaagaaagacgaaggaaaagattctgtacctcagactgagacttgcaag
aagcaggatgagcaggacaagtgtccagaggcgaaggaaatgtctctgaaagagcaagac
aaatctcctgagagtaaggacaaatctcagaaagagcaggacaaggagaagtctctggag
gggcaagcaaagtctctaaaaaagcaggacaaagacaagtcccctaaagagcaagacaag
gataagtctgtgaaagatcaggacaaagacaaatctcaaaaagagcaggagaaggacgaa
tctccaaaagagcagcagaaggacgaatctccaaaggagcaggagaaggacaaatcacaa
aaagagcaggagaaagaaaagtctttgaaagagcaggacaaggacaagtctttgaaagag
caggacaaggacaagtctttgaaagaccaggtcaaggacaagtctttgaaagagcaggag
aaggacaaatctttgaaagagcaggagaaggacaagtctcaaaaagagcaggagaaggac
aagtctttgttgaaagagcaggacaaggacaagtcttcgacagagcaggacaaatctcag
aaagagcaggagaaggacaagtctccaaaagagcaggacaaggacaagtcttcagagggg
caagtcaagtctctaaaagagcaggcaaaggacaagtctgtaaaagaccaggacgaggac
aagtcccctacagaacaggacaaggaaaagtctctggatgaagaaaagcctcaaaagaaa
agcaagagttgtaaggataaaaccaaaatcgatgaaagttctgtagaggaaaagaaagat
gaaggcattgagaaaagttcttctgaagagacaggcgaaaaagtttcagaggagaaaaag
acagagacaggcaaaaagggggtgaaggcaaataaggagaaaccatctgaagaaccacag
gaaggaattcgcattaaactcaaagtcccggttagtaggcgaaaggcagatctgttaaga
gacgaaggcaagggagactctgagtcggaagccagcgaaggaaggtgcttaaggcgctca
ccaaggatctgcagaccctcagccaaagtggtcgagatccaagaccggaaagttgagaag
aagcaggccacctctttgacagagaaggacaaggatgaaagtgacgaaaaagaggaggag
gaaatcacagtacagaagaaaccgagggagaggaaggttgatccagaagctcaaaataaa
ccgaaggggcgacgccgaaagaggacctgctggtccaacactcgaacgcggcgcaaaaag
aagggctcagaagacgaagatgacgagagttcaagtgaggaagaggaaacggaggaagat
gacagtgatgaggatttcaaggtggtgaaatccagaaagaggaggaggaactgcgacaga
gtgaagaactctgattcttctacctcgtgttcagaggaagaacttccgaatgatgacccc
tgcaaacactgtggcctgcccaaccatcctgagctgattcttctctgtgattcgtgtgac
aatggatatcatacagcttgtctccggcctcctcttatgatcatcccagatggagaatgg
ttctgtccaccctgccaacataaattgctttgtgataagctggaagaacagctggttaat
atcgatgcagcgcttaagaagaaggaacgggcggagagaaggaaagagcgcctggtttat
gttgggatcagcgttgagaacataatcacaccttctgttgaaccagaagaagaaaaagaa
gaggaagacaaggtgaaggaaaagaaggaggtcaagaaagtcaagtcctggggtcgaaga
tcaacacgagcaaagaaatatattagctacaggtttgatgagtttgatgaagcgatcgag
gaagcaattgaagaagacattaaagaagcagaaggaggaggagcgggtcgaggaaaggac
atggccaatatcacaggccaccgagggaaggacatgtccaccatcttacaggaagaagga
aaggagaacgggcggccccagaggaccagcacagttcagcggagaaaaaagcggcggcgc
ctcaacgacctggacagtgacagcactgtggaggaagaggagagtgaggacgagttccgc
ctcagtgaaagcagtgaggaggagtttgtcgcgtctggtaacgcagagagcgaagcagag
ggccagtcgtttgatgatagtgactttggcagtgatggctgtggtccagccaaacgcatg
tcgtccaggcgaacggccgctaggcgccggagcactcggactcgcaggagacgcagaccc
agaggttcctctgacgatgaagagcttgaggatactgaggaagaggaggatgaaattgtt
accgaaggatcaagtgactacagtgagaatgatctggacatgcgcagacgccgctctcac
cggagccggaagcagcaggttaattaccgtgagacctcagactctgatggctcgcagaca
agcaaaaacaaagacaagcaaaagagccgtagacgtttgtccagctcagagagtgaagca
agtttcaactctgcggattctgaagaagacgcccgtaagagtaagaagcgaaaagccgac
tcgtctgaagaggattcccgcaaacggcgccggcctcagacactcaagcgcaggagagag
tctgaggaggacgacgacgacgacgacgatgatgacgattcggacgaatcagaagaagag
gatcggccagttcgcaagagggtgaaccgcatcgattcggatgacagcgaggaggaggag
aaggaagagaagaaagaggagaaggagagcaaggaggagaagaagacgacgactaccacc
acaacctccacccccaacgctgcagagaaggacaaggatgcggaaaaggagacggaggcg
gaggatgtcctgggaaagggcgttggcacgcttgactacaacctggaggagcttcctgcc
actaacggacagagccccatgaaaagcctggaggggctggtcccacgacctgccgcgggc
acagggaaccctgctctcgtgggtaacgtgggcttaaaaaacagcagtgcgccgccacct
gtagccatggctgccaatggcctggccccccaggagatggcgccacaggacgaagaggag
gatgacctattaggggtcacagaccttgtagactatgtctgcaacagtgaacagttgaaa
gacgattga
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