Astyanax mexicanus (Mexican tetra): 103028333
Help
Entry
103028333 CDS
T05042
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103028333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103028333
Membrane trafficking [BR:
amex04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
103028333
Endosome - Golgi transport
Arf GTPase associated proteins
103028333
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103028333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
PH_11
SAM_1
SAM_2
PH_8
PH_6
PH_9
Motif
Other DBs
NCBI-GeneID:
103028333
NCBI-ProteinID:
XP_007247710
Ensembl:
ENSAMXG00000011633
UniProt:
A0A8B9HE21
LinkDB
All DBs
Position
18:complement(11518722..11641716)
Genome browser
AA seq
1603 aa
AA seq
DB search
MSSTTAAGAGSQPVPDWLGGLHLEQYCTAFHEAGLTTLWECRRLTTSQLEDMGICLKGHR
RRILGSLQKHFPSERGMEEEDEDDKPVPMERTKFRGHVQGTSSECSGSSQSQAGKLQNHN
QNIAPPPIPPRHIPNRPPVPFTSQPVAVATTDSPVPAKASSPISPTSASLPTIKPRHTTP
AAPVPQARPTPAPRPRPESLPLKQTTEKHQSVDKKLSPISPCVSSSSSSSSLSSSSSLSL
SSEQFHLYEQCSSPGQAEMGIPPLPPKAYAIGASREPKLAPPGKPTRRPPIPPRTTNPPT
TTSTTSTNNPPTTTSTTSTNNPPTTTSTTNHNNAAAQPKSPPALSSSPVDDLLDLEQAPD
VPPRPASQSPKKVVPLPPSQSRLVDSSESSDEYEDLGQSRCGTTDPLDMADKSTSLPVPI
IPKPRYSSLCSDDEVLDDEGDLCYESVPEKRDLWIENYSSLPSTQNSIYLPVTGRVLAPS
PKTDSTPQLTPVIKMGWLDKNPPQGSLIYQRRWVKLDADYLRYFDNEKEVYSKRVIPTSS
ITGVANVGDQKFEVVTHNRIFLFRAESDSERNEWVSVLQDMTGPVRARVSNELTLNPMVN
SEMKGYLELRGLRSKLYTVVCGDKVFLYKNIEEYKMGIGITSIDMNVGNVKEMDRRAFDL
TTPYRIFSFIAETDQLKDQWVEAMRNSIAEALSNYEVAEKIWAEPDNQKCADCGAPKPEW
AAINLCVVFCKRCAGEHRSLGPSISKVRSLKMDKKVWTNELIQLFRVLGNERANQFWAAN
VPPSEALSVCSSSEERRRFITAKYREGKYRRYHPLFGNQKELNNALCINVQSNDVCETLA
LVFCGADVNCDTGLPDSPSPIALAVNYGQALQVEFLTQNRNTEIPRSEVKLAIHTEHYMA
PPSITHNGFLFKTASMARPITERKNKEEFSRRWCVLNDGNFNYYESDKNATPNGGLKMKE
IVCLAVSPPETHGYDHSFEIYSDAERLYLFGTDNPETMREWVKSIAKSFIPQCAEELLQK
DFERIGRLRYKDPLNLESSRVGWFCLVGSTLHVCLEDSHGQETIHLQKLLELSRDNEVLV
LVERGRTLYIEGERKLDFHGWAAGIERAAGSSGDTLRQQQLTEADIPVIVERCIHYITQY
GLTSEGIYRKSGVNSKIAALLEAFRRNARSVWLKEAEQQVDDVSNVLKRFFRDIEEGLFG
QHSQNWLTTTAVSDESKRISHYQLLFNNLPRVNKATLRTLVNHLYCVQRFSEMNQMNLHN
LAIVFGPTLFQTDGKDYNAGRVVEDLIQHYIAIFHVNEQQLKRQLDEITYIIKLRDNLNP
KTGPASGDFICTVYLEEKKETAEQHVKVPASMTAAELTFEILDRRKMTWKDKDYWCCFEV
YEKEETERPLHYQERVLPILHSLGTDSYLLVKKHHSMEAMLVYLASKVDVTKHGMLKFRE
EKSLLGLTTGSFNDRYFMLNQTSLRLYKDVRSNRAEKEWPVKCLKVFQGIKKKLRPPTCW
GLTVVYESERTEKQEKQQWYLCCDTQTEMREWFATFLSIQHAGVLWPADWVKSRAASRAA
SRAAPPDARLGNVSLIPLRGSENEMRNSVAAFTADPLALFGNL
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaccacagcggctggagcaggttctcagcctgttcctgactggctgggcggg
cttcaccttgagcagtactgcactgctttccatgaagctggacttacaacactgtgggaa
tgcaggaggctgaccacaagccaactggaggacatgggcatctgcttgaagggacacagg
aggcggattcttggaagcctgcagaagcactttccttcagaacgagggatggaagaggag
gacgaggatgacaagcctgttccgatggagaggacgaaattcagaggacacgttcagggg
acgtcatcggagtgttcgggaagctctcagtctcaagctggcaaacttcaaaaccacaac
cagaacattgctcctcctcctatccctccccgacacatcccgaaccgcccacctgtacct
ttcacatcccagcctgttgccgtagcaaccaccgacagtcccgtacctgcgaaagctagc
agtcccatctctccaacaagcgcatctttaccaacaatcaaaccgaggcatacaactcct
gctgctccagtccctcaagccagacccactcctgctccaaggccacgcccagaaagcttg
cctctaaaacagacgacggaaaagcatcagagtgtcgacaaaaagctttcgcccatctct
ccatgtgtgtcttcctcctcatcatcgtcctcgttgtcgtcatcatcgtctttatcgtta
tcttcagaacagtttcacctgtacgagcagtgttcttctccagggcaggccgagatgggg
attcctcctctacccccaaaagcttacgccatcggggcctccagagagcccaagttggct
cctcctggtaaacctacccgcagaccacctatacctcctcgtaccactaacccccccacc
accaccagcaccaccagcaccaacaacccccccaccaccaccagcaccaccagcaccaac
aacccccccaccaccaccagcaccaccaaccacaataatgccgcggcacaacccaaaagt
cctccagctctcagctcctctccagtggatgatctcttggatttagaacaagctccagac
gtaccaccacggcccgcatctcagagcccgaagaaagtagttcccttacccccctctcag
agcaggctggtggattcttcagaaagttcggatgagtatgaagatttgggacagagcaga
tgtggaaccactgaccccttagacatggcagacaagagtacgtccctgccagttcccata
atacccaaacctcgctacagcagcctgtgcagtgatgacgaagttctagacgatgaaggt
gacctctgttacgagtctgtgccggagaagagggatctgtggattgagaactacagttca
ctccccagcacacagaacagcatctacctgccagtcacaggacgggttttagccccttcc
cctaaaacagactccacccctcagctcacaccggtcataaagatgggctggctggacaag
aaccctccacaggggtcactgatctaccaacgacgttgggtcaaactggacgctgattac
ctgagatacttcgacaatgaaaaggaagtctattcaaagcgagtcataccaacctcctcc
atcacgggggtggctaacgtgggagatcagaagtttgaggtcgtcacacacaatcggatc
tttcttttccgagcagagagtgactctgagaggaatgaatgggtttcagtgctgcaggat
atgaccggtccggtccgtgcgagggtgagcaatgagttgacccttaaccccatggtgaac
tctgagatgaagggttatctggagctgcggggtctgcgctctaaactctacactgtggtg
tgtggagataaagtcttcctctacaaaaatattgaggaatataaaatgggtattgggatt
acctccatagacatgaacgtagggaatgtgaaagaaatggacaggagagcatttgacctg
accacaccctaccgcatattcagttttatagcagagaccgaccagctgaaggaccagtgg
gtggaggccatgcgcaactccatcgcagaagctctgtccaattacgaggttgctgagaag
atatgggcggagccagataaccagaaatgtgccgactgtggcgcccccaaacccgagtgg
gcggccattaacctgtgtgtggtcttctgcaaacgttgtgcaggagagcaccgcagcctt
ggccccagcatatcaaaagtacggagtctcaaaatggacaagaaggtttggactaatgag
cttatccagctgtttcgggtgctaggcaacgagcgggccaatcagttttgggcggctaac
gtcccgcccagtgaggcgctgagtgtgtgcagtagcagcgaggagaggcggcgcttcatc
acagccaaataccgggaggggaaataccgccggtaccatccgctcttcggcaaccagaaa
gaactcaacaatgcgttgtgtattaatgtgcagtctaatgacgtgtgtgagaccctggcc
ctggtgttttgtggagctgatgtgaactgtgacacaggcctcccagattccccctcccct
attgcccttgcagtgaactacgggcaggccttacaggtggagttcctcacgcagaaccgc
aacacagaaatcccaagatccgaagtgaagcttgccatacacacagagcactacatggcc
ccgccttccatcacacacaatggcttcctgtttaaaaccgcctccatggcccgtccaatc
acagagcggaagaacaaagaagagttcagcaggcgctggtgtgtgctaaatgatggaaac
tttaattattatgaaagtgataagaacgccacgcccaacgggggtctgaagatgaaggag
attgtctgtctggctgtcagtcctcctgagacacatgggtatgatcactcatttgagatc
tactcggatgcagagcgtctctaccttttcggcactgacaatcctgagaccatgagggaa
tgggtgaaatctatcgccaagtcattcatccctcagtgtgcggaggagttgctgcagaag
gattttgagcggattggccgcttgcggtacaaagacccgctgaatctggagagctccagg
gtgggctggttctgcctggtgggctccaccctgcatgtgtgcctggaggacagccacggc
caggaaaccatccacctgcagaaacttctagagctgtcaagggataatgaagttctggtg
ctggttgagaggggcagaacgctgtatatagagggtgagaggaagttggattttcatggc
tgggcggctgggatcgagagggctgctggaagttctggagatacgctgcgtcagcaacag
ctcaccgaggccgacataccggttatagtggagcgctgcattcactacatcacgcaatac
gggctgacgtctgaggggatctaccgtaagagcggtgtgaacagtaagatcgccgccctt
ctggaggcgttcaggcggaatgctcgctctgtgtggttgaaggaggcggagcagcaggtg
gatgacgtctccaacgttctgaagaggttcttcagggacatcgaggagggtctgtttggc
cagcattcacagaactggctcaccactacagctgtttcagatgaaagcaagaggatatct
cactatcagcttctgttcaacaacctgccccgggtcaacaaagccacactacgcacccta
gtcaatcacttatactgtgttcagcgcttttccgagatgaaccagatgaacctgcataac
ttggcgatagtgtttgggccgacgctgttccagacagatggtaaagactacaacgccggg
cgtgtggtggaggacctcattcagcactacatcgccatattccatgtaaatgagcagcag
ttaaagaggcagcttgatgagatcacctacatcattaagctgagagacaacctcaaccct
aaaacaggaccggccagtggtgattttatctgtacagtgtatctggaggagaagaaggag
acagcggaacagcatgtgaaggtcccggcctctatgacggcagctgagctaacgtttgag
atcctggaccgacggaaaatgacctggaaagataaagactactggtgctgctttgaggtc
tatgagaaagaagaaacagaacgtccactgcactatcaggagcgtgtgctacccatcctg
cactctctgggcacagacagttacctgctggtgaagaagcatcactccatggaggccatg
ctggtatatctggccagcaaggtggacgtgactaagcatggcatgctgaagttcagagag
gagaagagtctgcttggtttgaccaccggcagcttcaatgacagatacttcatgctcaac
cagacgtcattacgactctacaaggatgttcgaagtaatcgggctgagaaggagtggcca
gtgaagtgtctgaaagttttccaaggcatcaagaagaagctccgcccccctacttgctgg
ggtctcaccgtcgtctatgaaagtgaaagaacagagaagcaggagaaacagcagtggtat
ctgtgttgtgacactcagacggagatgagagagtggtttgctacgtttttgagtatacag
catgccggggtgctctggccggcggattgggtgaagtctcgagctgcgagtcgcgctgcg
agtcgcgctgcgccgccggacgcccggctcggtaacgtctccctcattcctctccgcggc
agcgaaaacgagatgaggaacagcgtggctgctttcactgccgatcccctcgctctattt
ggaaatctatga
DBGET
integrated database retrieval system
