Astyanax mexicanus (Mexican tetra): 103028350
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Entry
103028350 CDS
T05042
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103028350 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103028350 (snrpa)
Spliceosome [BR:
amex03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
103028350 (snrpa)
Complex B
103028350 (snrpa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
103028350
NCBI-ProteinID:
XP_007251066
Ensembl:
ENSAMXG00000032885
UniProt:
A0A8B9K2I9
A0A3B1KFT8
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Position
9:complement(32623550..32628496)
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AA seq
281 aa
AA seq
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MAGQELRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKRKPKSTEAGA
SKKGVPAAAPGMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMGPGQMPPG
AMPPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNEVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctggccaggagctccgtctgaatcacaccatttacatcaacaacttgaatgagaaa
atcaagaaagatgaattaaagaaatccctttatgccattttctcccagtttgggcaaatc
ctggacatccttgtgtcccgcactctgaagatgaggggtcaggctttcgtcattttcaaa
gaggtcaacagtgcctccaacgctctgagatctatgcagggtttcccattttatgataaa
cccatgcgcattcagtatgccaagcaagactctgacattatcgcgaagatgaagggaacg
tatgtggagcgggatcgtaagaaggagaagaggaagcctaaaagtactgaagccggtgca
tcaaagaagggtgtgccagctgctgcccctggcatggctggagttcctgctgctatgccg
ggaatgcctcctatgagtcaggctcctcgtatgatgccaatgccaggccagcctccttac
atgcctcctcctggtatgatgccaccacctggtatgggtcctggacagatgcccccaggt
gctatgcctcctggtcagatgatgccagggcaaatgcctggccagatgcctcagcaggtt
tcggagaacccacccaaccatatcctgttcctcaccaacctgccagaggagacaaacgag
cttatgctctccatgctgttcaaccagttcccagggttcaaagaggtgcgtcttgttcct
ggtcgtcacgatatcgccttcgtggagttcgataacgaggtgcaggcaggagctgccagg
gaagcactacagggcttcaagatcactcagaccaacgccatgaagatctccttcgccaag
aaataa
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