Astyanax mexicanus (Mexican tetra): 103028356 Help Entry 103028356         CDS       T05042                                  Symbol col6a2 Name (RefSeq) collagen alpha-2(VI) chain   KO K06238   collagen type VI alpha Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04510   Focal adhesion amex04512   ECM-receptor interaction amex04518   Integrin signaling amex04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:amex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103028356 (col6a2)    04518 Integrin signaling     103028356 (col6a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     103028356 (col6a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     103028356 (col6a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:amex04147]     103028356 (col6a2)    00536 Glycosaminoglycan binding proteins [BR:amex00536]     103028356 (col6a2) Exosome [BR:amex04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    103028356 (col6a2) Glycosaminoglycan binding proteins [BR:amex00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103028356 (col6a2)  Hyaluronan   Extracellular matrix or blood plasma proteins    103028356 (col6a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 Motif Other DBs NCBI-GeneID:  103028356 NCBI-ProteinID:  XP_022525260 Ensembl:  ENSAMXG00000008110 LinkDB All DBs Position 16:complement(4977402..5016263) Genome browser AA seq 1009 aa AA seqDB search MMLLKVIALCFLYGAAVYGQDCNKKPECPIDLYFLIDTSETIALQENPPGSLVESIKDFT VAFAQKLEDMDYRGLVQISWSVGGLHFSMRQEIISGITNKNDFIQRVKAIRYLGKGTFTD CAITNMTREMQRAPSKPNAKRFAVVITDGHVTGNPCGGVKVAAERARDEFIKIFVVAASK NLEETALREIANSPVGVYRSNYMAVDLTGARPVILTKTIDRIYEAMLHQAYQECYSLRCL ETAGPPGPQGHRGQKGAKGDNGEAGLKGEKGRAGDPGIEGPIGHPGPKGEPGLKGEKGEL GTQGRKGVAGLSGRNGTDGQKGKIGRIGAPGCKGDEGDKGPDGYPGEVGESGLRGAPGEK GDSGRPGRPGPTGPSGDGGPKGERGSPGTPGLPGQKGSAGTPGGPGPKGDPGRRGDFGPK GGEGPAGSKGENGEAGTEGLRGLAGEVGNKGTKGDPGLPGPRGPAGSPGEPGRNGSRGDS GDAGPRGEPGPPGPIGDSGRPGFSYPGPRGPTGDRGEKGRPGARGSRGDCGQKGEPGLKG PNGEPGDPGPQGEPGPRGPKGDSGRDGDPGPEGDAGLTECDVMNYIRETCGCCDCEKRCG ALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSIAKDPNSETGTRVGVVQYSHSGTFQ AISLNDTKIDSLSAFKDAVKKLEWIAGGTWTPSALKFAYDNMIRDSRRSKAKVTVVVITD GRFDPRDDDSLLTYLCTDNSIDVNAIGIGDMFDQVEENESLKSIACQKEGGVLGMRRFAD LVAEEFIDRIETVLCPDPVVICPDLPCKTEPAVASCVQRPVDLVFLLDGSERMGVENFRR AREFVEQVADQLMLARRDNDERNTRVALLQYGDEGTQEVAFKLSHNITVISDGLAGMMYL DSASNVGSAIMYAVNNILMSGTSRLARRNAEISFVFITDGVTSNKNLEEGLSAMRRAEGV PTVIAMGSDVDQEVLTKLALGDQTAIFRGQDYSHLSRRSFIDRFLRWIC NT seq 3030 nt NT seq  +upstreamnt  +downstreamnt atgatgctgttgaaggtcattgcactgtgcttcctgtatggagcagcagtctatggccag gactgcaacaaaaagccagaatgcccgattgatctgtacttcctcatcgatacatcggag acgatcgctcttcaggagaatcctccgggcagtttggtggagagcatcaaggacttcacc gttgccttcgctcagaagctggaggacatggactacagaggcctggtgcagatcagctgg tctgtgggcggcctccacttctccatgaggcaggagatcatcagcggcatcaccaacaag aatgatttcatccagagggtgaaggccatccggtacctcggcaagggcaccttcaccgac tgcgccatcaccaacatgaccagagagatgcagcgcgcgccgtccaaacccaacgccaag cgcttcgccgtggtgatcacagacggccatgtaaccggaaacccctgcggcggggtgaag gtggcggcagagcgagcgagggatgagtttattaagatattcgtcgtagccgcgtccaag aacctggaggagacggcgctgagggagatcgccaactctccagtcggggtttacagaagt aactacatggccgtggatctgacaggagctcgacccgtcattttaaccaagaccattgac cgtatctatgaggctatgctgcatcaagcttatcaagagtgctatagcctcagatgcttg gagacagctggacctcctggtccacagggacacaggggacagaaaggtgcaaaaggagac aacggtgaagctggtctgaaaggtgaaaaaggtcgtgctggtgaccccggtattgaaggt cctattggtcatcctggtccaaaaggagaacctggtctcaaaggtgaaaagggagagctt ggaacacaaggaaggaagggagtggcagggctgtcgggacgcaacggaaccgatggtcag aagggtaaaattggacgcatcggtgctcctggctgcaaaggtgatgaaggtgataagggt cctgacggatatcctggagaagtaggagagagcggcctgcgtggagctccaggagagaag ggagattcaggtcgtcctggaagaccaggacctactggcccatctggcgacgggggtcca aagggtgaaagaggaagtccaggaacgccgggtctcccaggtcagaagggttctgcagga acaccaggaggacctgggccaaaaggtgaccctgggagaagaggagatttcggaccaaag ggaggggagggaccagccgggtcaaaaggagagaatggtgaagcaggtactgaaggtttg agaggcctcgcaggggaagttggaaacaaaggaaccaagggagatccaggacttccagga ccacgaggccccgcaggatcccccggagagcctggaagaaatggtagccgcggtgactcc ggtgatgccggaccgagaggagagccaggacccccaggaccaatcggcgactctggcaga ccaggattcagctacccaggaccaagaggacccacgggtgaccgaggagagaaaggcaga cctggagccagaggcagcaggggagactgtggacagaagggagaacctggactaaaagga cctaatggagaacctggagaccctggacctcagggtgaacctggaccaagagggcccaaa ggagattcaggaagagatggtgatcctggtccggagggagacgcaggccttacagaatgt gatgtcatgaactacatcagggagacctgtgggtgctgtgactgtgagaagaggtgtgga gccctggatattgtatttgtgattgacagctcagaaagtgtgggattaaccaactttacc ctggagaagaacttcgtcatcaacaccatcaacagactgggctcaatcgctaaagacccc aactcagagaccggaacccgtgttggcgtggtccagtacagtcacagtggcactttccag gccatcagcctaaacgacaccaagatcgattccctgtcagcttttaaagacgctgtgaag aagctggagtggatcgctggaggcacatggactccatccgctctgaaattcgcctacgac aacatgatccgcgacagtcgccgcagcaaggctaaagtaaccgtggtggtcatcaccgac ggtcgcttcgacccgcgagacgacgactccctgctcacctacctctgcactgataacagc atagacgtgaacgccatcgggatcggagacatgttcgaccaggtggaggagaacgagagt ctgaagtccatcgcctgccagaaggagggaggagtgctgggcatgaggcgcttcgccgac ctggtggcagaggaattcatagatcgaattgagacggtgctgtgcccagatcctgtggtc atctgccccgatctcccatgcaaaactgagccggcagtggccagttgtgtgcagcgtccg gtggatctggtgttcctgctggacgggtcggagcggatgggcgtggagaacttcaggaga gctcgtgagtttgtggagcaggtggctgatcagttgatgttggctcggagggataacgac gagaggaacacccgcgtggctctgctgcagtacggagacgagggaactcaggaagtggct ttcaaactctcgcacaatataaccgtcatctccgatggcctggcgggcatgatgtacctg gactccgcctccaacgtgggcagcgccatcatgtacgccgtcaacaacatcctgatgagc ggaaccagccgcctggctcgccgcaacgccgagatctccttcgtcttcatcaccgacggc gtcaccagcaacaagaatctggaggagggcctcagcgccatgcgcagggccgagggcgtg cccaccgtcatcgccatgggcagcgatgtcgaccaggaagtgctgacgaagctcgcgctc ggagaccagacagccattttcaggggacaggattacagccacctctccagacgcagcttc attgaccgtttcctccggtggatctgctga

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