Astyanax mexicanus (Mexican tetra): 103028411
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Entry
103028411 CDS
T05042
Name
(RefSeq) proto-oncogene DBL isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103028411
Membrane trafficking [BR:
amex04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103028411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
PH
CRAL_TRIO_2
Spectrin
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
103028411
NCBI-ProteinID:
XP_049324987
LinkDB
All DBs
Position
20:complement(12496060..12557012)
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AA seq
1052 aa
AA seq
DB search
MAEANTLRGLPRFRRATASFPGNLHLVLVLRPKSHVHTTGTDLGFRFSQDDFTFKMPVIM
LSSVTDLLRYIDENQLSSEFGGTLECCPSDWIVLRTAIESFAVTVKEVAQLLQTFGTELT
EAELPDEASTIEYLLRSHTDRYRQMKDDIRSVIKDGRQILSNLEGARAAEGAAMEDRDIN
QDRDTVQRLLAQLRDMEVAFDGFFEKHHLKLQQYLQLLRYEQSFHEMEALLEKLSAREKA
IPSSGVTVAQTEQLLKDLEDLDTTAEDEMGHAQIIVLHGHQLAASHHYALALIVQRCNEL
RHHCDTLTTALRIKHTALTNTRNLLLRLEELVGWCDQGAYLLANQLVDKFQSKDGAQAAL
RDIDTLLDTAPPAVHSSPDLLMLEFQTVLTPQIEAQITAVMEKLSAVQAMIHNRQVCLRK
LADVQVRPIQLVSPRPESPTRLKSPLFSPKHSFDVNSSLKFSFDLSLPGKRASRKNNNTK
KVRYIEVMHDYEENRSCVLYEADGVDNPDQHKRHVLKELVETERVYVEELLSVLLGYRAE
MDNPAISHILPSELHNKKEVLFGNLPEIYKFHSRYRYTNTCEHTNTHTQCKLMLPVIFRL
FVQDLESCLETPERVGARFLERKENFQVYECYCQNKPRSEALWRQCSDSLFFQNCKKKLE
HKLDLDSYLLKPIQRLTKYQLLLKELLRHSTGSPYVAELQGALNTMLDLLKSVNDSMHQI
AITGYEGELSDLGRVLMQGSFSVWMRKGVMRVKDIARFKPMQRHLFLHERALLFCKRREE
NGDQMSYSFKHCLRMSAVGITESIKGDVKKFEIWYSGREEVYVVQAPTVEVKQAWLSEMR
KILTSQQKNLSENSYSSVDQPQYPPLADSVERMPVCMPWSSTHIAGCSGCFDLVPHSKLQ
GAPASSEESDRSSPALTDPVVFSPHPQQHNRRSWPGTSNSVDICEGLEDWATDLSFISDS
DEEDDNAVVPGRYRAMVDHLKCGKDDLIIKHGDVIHVLQENTAGLWQVKNLTRGGEGRLP
VDTLLRILGNVGRSHVISPGGKENLKSRKLST
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccaataccctcagaggcttgccccgattcaggcgtgccacggcctctttt
cctggaaatcttcacttggttctggtgctgaggcccaaaagtcacgtccataccactggg
actgaccttggtttccgcttcagccaggatgactttactttcaagatgccggtgatcatg
ctgagttcggtgactgatctactcaggtatattgatgagaatcagttgagttctgagttt
ggggggactctcgaatgctgcccgagcgactggattgttctcagaacggccatcgagagt
tttgcagtaactgtgaaagaggtggcccagctgctgcagactttcggtactgagctgact
gaggctgagctgccagacgaggccagcactattgagtacctgctcaggtcccacactgac
cgctacagacagatgaaggatgacattcggtcagtgattaaagatggaaggcagatccta
tccaatctggagggagctcgagctgcagagggagcagcaatggaggacagagacatcaac
caggacagagacactgtacagaggcttctggcccagctaagagacatggaggtggctttt
gacggcttttttgagaagcatcacctgaagctgcagcagtacctccagttgctccgatat
gagcagagcttccacgagatggaggccctgctagagaagctgagtgcaagagagaaagct
attccttcttcaggagtgactgtggcccaaactgagcagcttctgaaggacctggaggat
ctggacaccacagctgaggatgagatgggtcacgctcagatcattgtcttgcatggtcac
cagctggctgcgagtcaccactacgccctggctctgattgttcagcgctgtaacgaactg
cggcatcactgcgacactctgaccactgctctgcgcatcaaacacacagcacttacaaac
acacgcaacttactgctgcgcctggaggagttggttggatggtgtgaccagggagcatat
ctgctggccaatcaactggttgataagttccagtccaaggatggagctcaggcagccctg
cgtgatattgatacactactggacacagcgccccctgctgtccactccagccctgacctg
ctgatgctggagttccagacagtacttacccctcagatagaggcccagatcactgcagta
atggagaaactgagtgcggtccaggctatgatccacaacagacaggtctgtctgcgtaaa
ctggctgatgttcaggtcagacccatccagctggtttccccccggccggagagcccaaca
cgcctcaagtctccacttttctcccctaaacacagtttcgatgtgaattccagtttaaag
ttctcctttgacctctcgctcccaggcaaacgggcctcacggaaaaacaacaacacaaag
aaggtcagatatattgaagtgatgcacgactatgaggaaaaccgcagctgtgtcttgtat
gaagcggatggtgttgataaccctgatcagcacaaacggcatgtgttgaaagagctggtg
gagacggagagggtgtatgtggaggagctactgtctgtgttactggggtacagggctgag
atggataaccctgccatttcccacatcctgccctctgaactgcacaacaagaaggaagtt
ttatttggaaacctgcctgagatctacaaattccacagcaggtacagatacacaaacaca
tgcgaacacacaaacacacacacacagtgtaagctcatgttgcctgtgatatttaggctg
tttgttcaggacctggagagctgcctggagactccagagagagtgggagcgagattcctg
gagagaaaggagaatttccaggtgtacgagtgctactgccagaataagccacgttcagaa
gcactgtggaggcagtgttcggattcactattcttccagaactgtaagaaaaaactggaa
cacaaacttgacctggattcatatttgctcaaacccattcagcgtctgaccaagtaccaa
ctccttctgaaggaactgcttagacacagtacaggctctccatacgtggcagaactgcag
ggggcgctaaacaccatgttggacctcctcaagtctgtcaatgactctatgcaccagatt
gccatcactggctatgagggtgagctgagtgacctgggccgggtgctgatgcagggctcc
ttcagtgtgtggatgcggaagggtgtgatgcgagtgaaggacattgcgcgcttcaaacca
atgcagaggcatctgttcctgcatgaaagagcactcctgttttgcaagagaagagaggag
aacggagaccaaatgtcctacagcttcaaacactgcctgaggatgagtgccgtgggaatc
actgagagcattaaaggagacgtgaagaagtttgagatctggtacagtggacgggaggag
gtgtatgtggtgcaggctcctacggtggaggtgaagcaggcatggctaagtgagatgaga
aaaatcctcaccagccagcagaagaacctttcagaaaacagttactccagtgtggatcag
cctcaatatcctcctttagctgacagtgtggagagaatgcccgtctgcatgccctggagc
tccacccacatcgctggctgctcaggttgttttgatctcgttcctcacagtaagctgcag
ggggcgccagcgagctcagaggagtcggaccgcagcagtccggccctgaccgacccggtg
gtattctctcctcacccacagcaacacaaccgccgcagttggcctggcacctccaactct
gtggacatctgtgaaggccttgaagactgggccaccgacctgtcctttatctcagactct
gatgaggaggatgacaatgcggtggttcctgggaggtaccgagcgatggttgaccacttg
aagtgcggcaaagacgacctcattataaagcacggagacgtcattcatgttctgcaggaa
aacacagcagggctctggcaagttaaaaacctgacccgaggaggagaaggaaggcttcct
gttgataccctgctgagaattctgggaaatgtaggcagaagtcatgtgatcagcccagga
ggcaaggaaaatctgaagagcaggaaactcagcacgtag
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integrated database retrieval system
