KEGG   Astyanax mexicanus (Mexican tetra): 103028415
Entry
103028415         CDS       T05042                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103028415 (kdm4c)
Enzymes [BR:amex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     103028415 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     103028415 (kdm4c)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103028415 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 Rad9_Rad53_bind PHDvar_NSD DUF7141 LBR_tudor
Other DBs
NCBI-GeneID: 103028415
NCBI-ProteinID: XP_022537455
Ensembl: ENSAMXG00000010076
LinkDB
Position
25:7071368..7098324
AA seq 1472 aa
MAGAGANAAVNPSCKIMTFRPTMEEFRDFNQYLVYMESQGAQRAGLAKVIPPKGWKPRRN
YDDIDDVIIQAPIQQMVAGQSGLFTQYNIQKKSLSVQEFRRLANSDTYCTPRYLNYEDLE
RKYWKNLTFVPPIYGADVSGTLYDEGVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLISPSVLKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASVRWID
YGRVATQCTCSKDMVKISMDPFVKRFQPDRYQAWTQGKDPCIIDHTLATPSTTPELQLWL
QRRRKARPSTKSSVHHPRTRSKRLKTVHERADVANTSGEGERQTSKKTGGALKNKESKGA
GKQKKDCKPHGAFHYSGLTGQCRQICVVKVTRVESDLLAQSSRCHKALPQAPPLESAPSQ
DTSSSNPQKSVADGLVTSDEALESQASSTENIPDSAMDESLGSERTVPSEWSFVAKSPNR
ESPSKCVPTTEQYQAFGANLNATSTASAVSAGDSLKGNMATGSQLRSSAAKALYKANPSS
SDELGPRFGTVYGATSSADMPLLTPEFSGEEEGRNPLNLTSEMPALTLAVQSTEDTLQSG
NPNQSASSDLVVQPDATTKTAAVAAASLSSSSSAAVLLDKADKTGTCSKALYPDWCSNPF
QEDGSQLLVPSTKAGKKQTTAESLSQWQFSSKVANQGEGRAGASNVLQHSTGLFGCSISN
VNTCALSQSNQSVESPSTSASPQTSLRPQHTESVSPPSLNLFEDSKPFSSNIWRNFNAQN
PAVLIESLQPSLAESDAHDQLPYAMWAESRCQQVKSPDPPDSPERALTWANLEPSSLHPS
GAEMTAELPLKDAPDDEFSSRGLQRTEGEGSERDSESGEREDDSSSESSEENMSETEYGA
SGLEPGEVCPYPMTPVKRRTAKSWRHPLRKPTARAVPSAVKQQANSDDEPTEECVSEGEQ
QEADAWARPLVHLWQNRKPHFPSEKEYNSTAAKTPPHCAVCSLFMPYYQPEERSDEKEVT
MRAEGESQGMRSRPLIPEICFAYREGSCPPNTLLEEDGSSPLVSCSRCCVQVHASCYGVA
AHDVSQDWTCDRCSCGDVTADCCLCNLRGGALKRTTDNRWAHVMCAVGLPEVKFADIVKR
SPIDVSAVPAQRYKLKCIYCRNRMKKLSGACIQCSCGRCPTSFHVTCAHAAGVTMEPDDW
PYVVFITCHRHQSRSSSAKMKVSRTELALGQTVITKHKNLRYYSSRVTEVMAQTFYEVMF
DDGSFSNDTYPEDIVSRDCAKLGPPEVGEAVQVKWPDGLFYGAKYLGSNTTYMYQVEFED
GSQVLAKREDIYTLEEDLPKKVKGRLVSWREEEAADAQLSLSERLRRPPQPPRLPDPRNA
QQQKQLRSARGRSAGRKRKSARASGRSCGGTV
NT seq 4419 nt   +upstreamnt  +downstreamnt
atggcaggcgccggggcaaacgccgccgttaacccctcctgtaagatcatgaccttccga
cccaccatggaggagttccgggacttcaaccagtacctggtgtacatggagtcccaggga
gctcagcgcgccggactggccaaggtgatcccgccaaagggttggaagccgaggcgtaac
tatgacgacatcgacgacgtcatcatccaagcgcccattcagcagatggttgcaggccag
tcggggctttttactcagtacaacattcagaagaaatcgctcagcgttcaggagttccgc
aggctcgccaacagtgacacgtattgtactccacggtacctgaactacgaggacctggag
aggaagtactggaagaatctgactttcgtgccaccgatatacggtgcagatgtcagtgga
acactttatgatgagggtgtagaagagtggaatatcggccacctaaactccatcctggat
gtgatcgaggaggactgtggggtctccatccagggcgtgaacacaccttacctgtacttt
ggcatgtggaagaccagcttctcctggcacacagaggacatggatctctacagcatcaac
tacctgcacttcggagagcccaagtcctggtatgctatacctccagaacatgggaagaga
ctggaacgattagccacaggtttcttccccaacagcttcaaaggttgtgaagctttcctg
agacacaagatgactctgatatctccctctgtgctgaagaaatacggcatcccgtttgat
aggataactcaggaggcgggagagtttatgatcacgtttccgtacggataccacgctggc
ttcaaccacggcttcaactgtgctgaatccaccaactttgccagtgtgcgctggatcgac
tacggcagggtcgccacgcagtgtacatgcagtaaggacatggtgaagatctccatggat
ccgtttgtaaagcgtttccagccggaccgttaccaggcctggacgcagggcaaagacccc
tgcatcatagaccacacactggccacgcccagcacaacacctgagctgcaactgtggctc
cagaggcgtcgcaaagcacgaccgtccactaaaagcagtgttcaccaccctcgcacgcgc
tccaaacgcctgaagaccgtgcacgagagagctgacgtggccaacacctctggggagggg
gaacgccaaacaagcaaaaagacaggaggagctctgaaaaataaggaatcgaaaggggcc
gggaagcagaaaaaggactgcaaaccccatggtgcatttcattactcaggccttactggt
caatgtcgacagatttgtgtcgtcaaggtcacacgtgtagaaagtgacttactggcccag
tcatctagatgtcacaaagccctgccccaagccccgccccttgaatctgccccctctcag
gacacgtcttcctcaaacccgcagaagtctgtagctgatggactggtaacttcagacgaa
gctttagagagccaggcatcctccactgagaacattccagactctgccatggatgagtct
ttgggctcagagagaactgttccttcagaatggtcattcgttgccaaatcccccaaccgt
gaatccccctcgaaatgtgtcccaaccactgaacagtatcaggcttttggagccaacctc
aatgcaaccagcacagcaagtgcggtgtcggcgggtgactctctcaaaggcaatatggct
acaggttctcagcttcgcagctctgcagcaaaggcactttataaagcaaatccttcttct
tcagatgaactcggacctcgttttggaactgtgtatggcgccacttcttccgccgacatg
cctctactgactccagagttttcgggagaggaagagggaaggaaccccctgaacttgacg
tccgaaatgcccgccttgactcttgcagtccagtccactgaagatacactccagtccggc
aacccaaaccagtcagcttcctcagatctggtggtccagccagacgcaacaacaaaaaca
gcagcagtagcagcagcatctttatcatcatcatcatctgctgcagttctattggataaa
gctgataaaactgggacttgttctaaagcactttatcccgattggtgttccaacccattc
caagaagatggtagccagttgctcgtccccagcaccaaagctggtaagaaacagacaaca
gctgaatccctctctcaatggcaattttccagtaaggtagccaatcagggagagggacgg
gctggagcttcaaatgtcttacagcactccacaggtctttttgggtgtagcatttccaac
gttaatacttgtgcactttctcagtccaatcagtccgtagagtctccgagcacctcagca
agtccccaaacgtctttacgtccacagcacactgaatccgtttctcctccttccctgaac
ctgttcgaggactccaaacccttctcctccaacatctggaggaacttcaacgcccagaat
cccgcggtgctgatcgaaagcctgcaaccaagcttggccgaaagcgacgctcacgaccag
ctgccttacgccatgtgggcagagtctcgctgccagcaggtcaaatctccagaccctcca
gattctccagagagggccctgacctgggctaacctggagcccagctctctgcacccttct
ggggcagagatgaccgcagagctccctctgaaagatgctcctgacgatgagttcagctct
cgggggcttcagaggaccgagggcgaagggtccgagcgagattcagaatcaggagaaaga
gaagatgacagcagcagcgagtccagtgaggagaacatgagcgagacggagtatggggct
tcaggcttggagccgggagaggtctgtccgtatcctatgaccccagtgaagagaaggact
gctaagagttggcgtcaccctctgaggaagccaacagctagagcagtccccagcgctgtg
aagcagcaggccaacagtgacgatgagcccacagaggagtgtgtatcagagggagagcag
caggaggccgatgcctgggccagacctctggttcatctgtggcagaacagaaagccccat
ttcccctccgaaaaagagtacaacagcactgcagctaaaacccctccacactgcgccgtc
tgcagcctcttcatgccctactatcagcctgaggagaggtcagatgaaaaggaggttacg
atgagggctgaaggagagtctcagggaatgaggtcgcgccccctgatcccggaaatctgc
tttgcttatcgcgagggctcctgtcccccaaacacacttctggaggaggatgggtccagt
cccctggtgtcctgcagccggtgctgtgtgcaggttcatgctagttgttatggtgttgct
gcccatgatgtcagccaagactggacatgtgaccgctgttcatgtggagacgtaacagct
gattgctgtttatgtaacttgaggggaggtgcattaaaaagaacaacagataacagatgg
gcacatgtgatgtgtgctgtgggtcttcctgaggtgaagttcgctgatatagtgaagagg
agtcccatagacgtcagtgccgtccccgcacagagatacaaactgaagtgtatatactgt
cgtaaccgtatgaagaagctgtcgggggcatgtattcagtgctcctgcggccgctgcccc
acctccttccacgtcacatgtgctcacgcggccggcgtcaccatggagcccgacgactgg
ccgtatgtagtgttcatcacctgccacaggcaccaatcacggagctccagtgctaaaatg
aaagtgagccgaacggagctggcgctgggccagactgtgatcaccaaacacaagaacctg
cgctactacagctcccgcgtcactgaagtaatggcgcaaactttttacgaggtcatgttt
gatgacggctcgttcagcaacgacacgtatcccgaggacattgtgagcagagactgtgcc
aagctcggcccaccggaggttggtgaggctgtgcaggtgaagtggcctgatggacttttc
tacggagctaagtacctgggctctaacaccacgtatatgtaccaggtggagtttgaggac
ggctctcaggttctggctaagagagaggacatttacacactggaagaggacttgcccaaa
aaggtcaagggacgccttgtgagttggcgagaggaagaggcagcggacgcccaactctcg
ctttcagaacgactacgtcgcccacctcagcccccgcgcctgccggacccccgaaacgcg
cagcagcaaaaacaactgaggagcgcgagaggaagatcggcggggaggaagaggaagagc
gcgagagcgagcgggcggagctgcggaggaactgtgtaa

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