Astyanax mexicanus (Mexican tetra): 103028417
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Entry
103028417 CDS
T05042
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103028417 (wdtc1)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103028417 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_19
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
TPR_2
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC3
TPR_1
TPR_17
TPR_16
Beta-prop_WDR19_1st
TPR_9
TPR_6
Barstar
Motif
Other DBs
NCBI-GeneID:
103028417
NCBI-ProteinID:
XP_022518129
Ensembl:
ENSAMXG00000007911
UniProt:
A0A3B1IYW8
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Position
1:130855175..130868946
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AA seq
668 aa
AA seq
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MSQRNIAGDILHRQIRENRALGFQRHYHVTDPFIKRLGLEAELEGHSGCVNCLEWNERGD
LLASGSDDQHAIVWDPLRHKKLITMHTGHAANIFSVKFLPHSGDRILVTGAADTKVHVHD
LTAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVLIDLTEY
CGQLVEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNHRKSAGQSVSAGVHTFCDKQK
PIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFLLPKKCHSSSEVQNGKTTNGVSNGIHLPTSRLKLANSKASSAAELPPRLERIKQ
QANDAFARQQWTQAIQLYSLGIHAAGHHAMLYGNRAAAYMKRKWDGDHYDALRDCLKALA
LNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACSALDKDIKAALFSKS
DSAEEKKGNSSIRFHNFSRKESIPEDEIILRERSFDYKHRYCGHCNTTTDIKEANFFGSK
GQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVVRLWTP
RPEAEVDNGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLSSRGPDASDDEDSTE
GQVQCRPS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaggaacatcgccggagatatcctgcaccggcagatccgggagaaccgggct
ctgggatttcagagacattatcatgtgactgatccctttataaagcgcctcggcctggag
gcggagctagagggtcactcaggctgtgtgaactgtctggaatggaacgagagaggagac
ttgttggcgtccggttccgatgatcagcacgccatcgtgtgggatcctctccgacacaag
aagctcatcactatgcacacaggtcatgcagctaacatcttctcagtgaagttcctgccg
cactccggagatcggatattggtgacgggagctgccgataccaaagtgcacgttcacgac
ctgacggccaaggagaccatccacatgttctccgaccacaccaaccgcgtcaagcgcatc
gctaccgcccccatgtggcccaacaccttctggagtgcggcggaggacggcatcatcagg
cagtatgatctgagggagagcagtaagcgatcggaggtattgatcgatctgacggagtac
tgcgggcagctggtggaggctaagtgtttagccgtgaacccgcgggacaacaactacctg
gcggtgggagctaacggcccgttcgtccggctctacgacatccggatgatccacaaccac
aggaagtctgcgggtcagagtgtatctgctggagttcacaccttctgcgataaacagaag
cccattccggatggagccggacagtactacgtagcaggtcatctccctgtgaagcttcca
gactataataaccggctgagggttctggtggccacctacgtcaccttcagtccggacggg
acggagctgctggtgaacatgggtggagagcaggtgtatctgtttgatctaacgtttaaa
cagaggccgtacaccttcctactgcccaagaagtgccattcctcatcagaggtgcagaac
gggaaaaccaccaatggcgtgtccaacggaatccatctacccaccagccgactcaaactg
gctaatagcaaagcttccagtgcggcggagttacccccgcggttggagagaataaagcag
caggctaatgatgcgtttgcgaggcagcagtggactcaggccatccagctctacagtctg
ggtatccacgccgccggccaccacgccatgctgtacggcaaccgcgccgccgcctacatg
aagcgcaagtgggacggggatcattacgacgctctgagggactgtctgaaggcgctggcg
ctgaaccccgggcacctgaaggctcatttccggttggcgcgctgtctgttcgagctgaag
tacgtggcggaggctctggagtgtctggatgattttaagggtaaatttccggagcaggct
cacagcagcgcctgcagcgccctggataaagatattaaagctgccctcttctccaaatcc
gactcggcggaggagaagaaaggaaacagctccatccgtttccacaacttcagccgtaaa
gagtcgatcccggaggacgagatcattctgagagaacgaagcttcgactacaagcatcga
tactgcggacactgcaacaccaccaccgacatcaaagaggccaacttcttcggcagtaaa
ggtcagtacatcgtgagcgggtctgatgacggctcgttctttatctgggagaaggagacg
actaatctggttcggattcttcagggagacgagtcgatagtgaactgccttcagccgcat
cccagctactgcttcctcgccaccagcggcatcgaccccgtcgtccggctctggaccccc
cgacccgaggcggaggtggataacgggcgtgtggtggaggatatggagggggcggcgcag
gccaatcagaggcggatgaacgctgatcctctggaggtgatgctgctgaacatgggctac
agaatcaccggcctgagcagccgcggccccgacgcctccgacgacgaggacagcaccgag
gggcaggtgcagtgccggcccagctag
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