Astyanax mexicanus (Mexican tetra): 103028485
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Entry
103028485 CDS
T05042
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103028485 (usp6nl)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103028485 (usp6nl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
103028485
NCBI-ProteinID:
XP_049329794
Ensembl:
ENSAMXG00000005953
LinkDB
All DBs
Position
2:22419119..22501341
Genome browser
AA seq
905 aa
AA seq
DB search
MQVLQIVKELVSPSRRRASSRFAASDAEQDAAVKLDQERAEIVARYDKGKEGAAVESWEE
ANYDLYKVVDRFGFLHQDELPAYNSLEERQKHVELERTEKWVKMLKSWDKYKNSDKMVRR
IYKGIPLQLRGQVWCLLLDVPKIREEKKDFYEKLKARARLLSPDIRQIDLDVNRTYRDHI
MFMHRYDVKQQDLFHVLTAYSMYNREVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGH
RHAMHGFFVDGFPKLLRFQEHHDRILKKMMPKLKQHLDSQEVFTSLYTMKWFFQCFLDRT
PFTLTLRIWDIYILEGERVLPAMSYTILKLHKKTLLKLSMEDLVEFLQVTLSKEFFFEDD
FVVEQLQNNMTELRRSKLELPPAGKDDEFPKKPLGQLPLDPAEAANHVANGQMPARQTVA
DGPSVLGIETGETANGSPDPHRDSRPASRAGKDRDSADKISRTGKGDKREGRKGASVMPA
TLGTGLTPEKHGPNHAGANHNSNAGSSGRKDVITPRWVKPSESKLEQAKAAALRESQQSL
TTVVPPSPTIKVPDEQQQQQQQQRQPRSRGFTPGSNRASNASQYDNVPGPNGDFTDVPEV
EPDRPPSRPYGSKQGSPTRPPSGGMGISAPSFRVPKHTPIPPTSDIRPPIHYTPGMTPVY
SPYTSKVRPPEDRGYGMTYGERAYSTTSRISPEKINRSPEKGPMNNSYATYRHQARDVTP
LHVAPADFGARMDNVGARMDNFGGRMDHVGPRIDNIGPRMDNFGARIENVGGRMDNIGPR
MDNMRLRMENTGARMDSTSEIGHHPRQPTRLLGSPAFTPAEQRFERQRRGEGWYGEMAEG
VMVGPLHSPGGLPRSPSFQKAQMSPVHPVQEFTFPPVGVPRPTLFGGSHYRQAQEAFALQ
ETMLL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcttcagatcgtgaaagagctggtgtctccctcacgccgaagagccagctcc
aggtttgcagcgtctgatgcggagcaggatgctgcagtgaagctggatcaggagcgggct
gagatcgtagccagatatgacaagggtaaggaaggtgcggcggtggagtcgtgggaggag
gcaaactatgacctgtataaagtggtggaccggttcggcttcctacatcaggatgaactt
ccagcctataactccttggaggaaaggcaaaagcatgttgaactggaaaggacagaaaag
tgggtgaagatgctgaaaagctgggacaagtacaagaacagcgacaagatggtaaggagg
atctataagggaattccgctgcagctccggggccaggtgtggtgtttgctcctcgacgtt
cccaaaatcagggaggagaagaaggacttctatgagaagctgaaggcgagagcgaggtta
ctgtctcctgatatccgtcagattgatctggatgtgaaccggacctacagagaccacatc
atgttcatgcaccgctatgacgtaaagcagcaggacctgttccacgtcctcacggcgtac
tccatgtataacagggaagtgggatactgtcagggaatgagtcagatcacagctctcctc
ctgatctatatgaatgaagaggatgcgttttgggctctggtcaaactactgtctggacac
aggcacgccatgcacggattttttgtggatggttttccaaagctcttacgcttccaggag
caccacgaccgcatcctgaagaagatgatgcccaagctgaagcagcatctagacagtcag
gaggttttcaccagcctgtacaccatgaagtggttctttcagtgctttctggaccgtacc
ccattcacattaacccttaggatatgggacatttacatcctggagggggagcgagttctg
cctgccatgtcctacaccatcctcaaactgcacaaaaaaacgctgttgaagctgtctatg
gaggatctggtggagttcctgcaggtgactctgtcgaaggaattcttctttgaagatgat
tttgtagtcgagcagctccagaacaacatgactgaactcagacgctccaaactcgagctt
cctccagcaggtaaagatgatgagtttccgaagaagccattgggtcagctacccctggat
ccggcagaagctgccaatcacgttgctaacgggcagatgccagccaggcagacggtggca
gacgggccgtctgttttaggcatagaaacgggcgaaactgcgaatggctcaccagatccc
cacagagacagtcggccggccagccgcgctgggaaagacagagactctgcggacaaaata
agccgaacggggaaaggcgataaacgagaggggcggaaaggagcttcggtgatgccggca
accctgggaacaggcctaacacctgagaaacacgggcccaaccatgctggagccaatcac
aactcaaacgccggctcaagcgggcgcaaagacgtcatcacaccccgctgggtcaaacct
tcggagagcaagctggagcaggccaaagctgctgccttgagagagagccagcagagcctg
accactgtcgttcctccgtcacccaccatcaaggtccctgacgaacaacagcagcagcag
caacagcagcgacaacccaggtctagaggtttcacccctggctccaaccgtgcctccaac
gcctctcaatacgacaacgtcccaggacccaacggagatttcactgatgttccagaggtg
gaaccagaccggccaccttctcgtccgtatggctctaaacagggaagcccaacaaggccc
cctagtggtggaatgggaatctccgccccgtcgttccgagtcccaaaacacactccaatc
ccacccacctccgacatccgcccaccaatacactacactcctggcatgacccctgtctac
tccccttatacatccaaagtgcgccccccagaggacagagggtacgggatgacgtacggc
gaaagggcatacagtaccacgtcccgaatttcgcctgagaaaataaatcgctcgccagaa
aaagggccgatgaacaacagctatgctacctaccgacatcaagctagagatgttacccca
ctccacgtggctcctgctgactttggagctcgaatggacaacgttggagccaggatggac
aattttggaggccgaatggaccatgttggaccccgcattgacaatattggacctcgtatg
gacaattttggagccagaatagaaaatgttggaggccgtatggacaacattggaccccga
atggataatatgagactccgaatggaaaacaccggagcaaggatggacagcaccagcgaa
atcggacaccacccgagacagccaacgcggcttttagggtcccctgctttcacgccagcc
gagcagcgattcgaaaggcagcggcgaggtgaaggctggtatggagagatggcggaggga
gtgatggtggggcctctgcattctccaggtgggttaccccgctcgcccagcttccagaaa
gcccagatgtctcccgtccacccggtccaagagttcaccttcccgcctgtgggtgtcccg
cggcccactctgtttggaggatctcactacagacaggctcaggaagcctttgccctacag
gaaaccatgctgctctga
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