KEGG   Astyanax mexicanus (Mexican tetra): 103028496
Entry
103028496         CDS       T05042                                 
Symbol
elavl4
Name
(RefSeq) ELAV-like protein 4 isoform X2
  KO
K13208  ELAV like protein 2/3/4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103028496 (elavl4)
   03041 Spliceosome [BR:amex03041]
    103028496 (elavl4)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103028496 (elavl4)
Spliceosome [BR:amex03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    103028496 (elavl4)
SSDB
Motif
Pfam: RRM_1 RRM_5 BRAP2 RRM_3
Other DBs
NCBI-GeneID: 103028496
NCBI-ProteinID: XP_022526741
Ensembl: ENSAMXG00000000687
LinkDB
Position
12:46255854..46432800
AA seq 451 aa
MFEISRTLNAALLSNEYLKMMVRYSQYSALAQAEGSVPGMGSLLLPHDPSSQPGARSLGG
STETQWRQADLPQLQGWADKGLLTQPKMIISNMEPQVTNGPNPATANGPSSNSRSCPSPM
QTSGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYI
DPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQY
GRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQ
KTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDSMTSLVGMNI
PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYD
EAAMAIASLNGYRLGDRVLQVSFKTNKTHKS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgttcgaaatcagccgaacactgaacgccgctttgttgagcaatgagtatctgaagatg
atggtaaggtactcccagtattcggcactagcccaggctgaaggctccgttccgggcatg
ggctccctgcttttgccccacgatccatccagccagccgggggccaggtcactgggggga
tcgacagagactcagtggcgtcaggcagacttgccgcagctccagggctgggctgacaaa
ggactgctgacacagccaaagatgataatcagcaacatggagcctcaggtgacgaacggg
ccgaacccggccacggccaacggcccctccagcaacagccgcagctgcccctcgcccatg
cagaccagcggctccaacgacgacagcaagaccaaccttatcgtcaactacctgccccag
aacatgacccaggaggagttccgcagcctcttcggcagcatcggagagatcgagtcctgc
aagctggtccgcgacaagatcacaggacagagccttggatatggtttcgtcaactacatt
gacccaaaggatgcagagaaagccatcaatacgttaaatggactcagacttcaaaccaaa
actatcaaggtgtcatacgcacggcccagctcagcctctatccgtgatgctaacctgtac
gtgagtgggctgccgaagaccatgacccagaaagaactggagcagctcttctcccagtac
ggacgaatcatcacctcccgcatcctcgtcgaccaggtcacaggtggctctcgcggggta
ggcttcattcgctttgataagaggatagaggcggaggaggccatcaagggcctgaacgga
cagaagccctctggagcggccgagccaatcacagtgaagttcgccaacaatcccagtcag
aagaccagccaggccctgctctcccagctctaccagtcccccaaccgccgctaccccggc
cccctgcaccaccaagcccagaggttcaggctggacaatttgcttaatatggcctatggc
gttaagaggttctcccccatcaccatagatagcatgaccagtctcgtagggatgaatatt
ccgggacacaccggcacgggctggtgcatcttcgtctacaacctgtccccggattcggac
gagagtgtcctgtggcagctcttcgggccgttcggagccgtcaacaacgtcaaggtgatc
cgcgacttcaacaccaacaagtgcaaggggttcggattcgtcaccatgacaaactacgac
gaggcggccatggccatcgccagtctgaacgggtaccggctgggcgaccgcgtattgcag
gtgtccttcaagaccaacaagacccacaagtcctga

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