Astyanax mexicanus (Mexican tetra): 103028592
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Entry
103028592 CDS
T05042
Symbol
srfa
Name
(RefSeq) serum response factor a isoform X1
KO
K04378
serum response factor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103028592 (srfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028592 (srfa)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
103028592 (srfa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
103028592
NCBI-ProteinID:
XP_007234078
Ensembl:
ENSAMXG00000001100
LinkDB
All DBs
Position
16
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AA seq
448 aa
AA seq
DB search
MLGGSEAALRAMSSGMGLPDGARFGNRACETQVVISGSEMDSESGEEEDMAVSGGERRGV
KRERAEPEAGAAAAGFSVAGGVAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIM
KKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRAD
SSTDQRMSATGFEETDLTYQVSEADGLPEPKDLMKPTFNPVNVSTVCTSSTSQSSPTQSP
SSLAVIQTQSTGPPLSSWPVSTGMNSHSVANSNSTVLKAGGAAAGVVQLPGAFALMSGGP
GSQQLQTIQVHTSPPSGDSSPEIIQNSTSPTISQTAVMTSVPSSLAGHVMYPSAVMYAAS
SSSLPDRGLTVLNPFTSPATAMHVAHSQSQESGAVPQMFLTGPQGTVQIPVSAVPLHSML
INQQPGGSSSPATLTELRVVNLDSTKGD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaagtgaggcggctctgcgggcaatgagctccgggatgggactccctgac
ggcgcccggtttggtaacagggcctgcgaaacccaggtagttattagcggatcggagatg
gactctgagtccggggaggaggaggacatggcggtgtctggcggggagaggagaggggtg
aagcgtgagagagccgagccggaggccggagctgcggcggctgggttcagtgtcgcgggc
ggtgtagccggagctaaaccgggcaaaaagacccgaggacgggtcaagattaagatggag
tttattgacaacaagttgagacggtacacgacttttagcaaaaggaaaactggtatcatg
aagaaggcatatgaactgtcaactctgactggtactcaggtgttgttgttggtggccagt
gagacgggtcatgtttacacgtttgcgactcggaagctgcagccgatgatcaccagtgag
acaggaaaagcactgatccagacatgtctgaactctccagactcaccgcctcgtgcagac
tcctccactgaccaacgcatgagtgccactggtttcgaggaaacggacctgacctaccag
gtgtctgaggcagatgggttgcctgaaccaaaggacctgatgaaaccaacattcaatcca
gtgaatgtgtccacagtctgcaccagcagcaccagtcagtcctcacccacccagtctcct
tcttcgttagctgttatacagacacagagcactggaccacctctttccagctggccagta
tcaacaggcatgaactcgcacagtgtggctaactctaacagcacagtgctgaaggcaggg
ggagctgcagccggagtggtgcagttacctggggcgtttgcactcatgtctggtggtcca
ggatctcagcagctgcagaccatccaagtccacacaagccctccaagtggtgacagcagc
cctgagattatccagaattctaccagccctactataagtcagactgctgtaatgacatct
gtgccttcctcgctggcggggcatgtcatgtatcccagtgcagtgatgtatgccgcatcc
tcctcatcactgccagacagaggcctcacggtgctgaacccatttacctcacctgccaca
gccatgcatgtggcacacagccagtcgcaagagtccggtgcagttccacagatgttcctc
acaggtcctcaaggaactgtacaaattcctgtctctgctgtccctctgcactcgatgctg
ataaaccagcagcccggcggcagcagtagccctgcgactctaactgaactccgggtggtc
aacttggacagtacaaaaggagactga
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