KEGG   Astyanax mexicanus (Mexican tetra): 103028628
Entry
103028628         CDS       T05042                                 
Symbol
pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03013  Nucleocytoplasmic transport
amex03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103028628 (pnn)
   03015 mRNA surveillance pathway
    103028628 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103028628 (pnn)
   03041 Spliceosome [BR:amex03041]
    103028628 (pnn)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103028628 (pnn)
Spliceosome [BR:amex03041]
 Complex C
  Other components
   EJC/TREX
    103028628 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 103028628
NCBI-ProteinID: XP_007241135
Ensembl: ENSAMXG00000033067
UniProt: A0A8B9KSD2
LinkDB
Position
14:1242378..1254166
AA seq 739 aa
MAVAVRNLQDQLEKAKESLKSVDENIRKLTGRDPNELRPGQTRRLSITGPGGGRGRGIGI
LRRGLSDGGGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESTVSTDRLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKIIKFIRTKTKP
PIFYLPGRMCSATQKLLDESQKKMNAVFDERREAFAEHLNKMEARPRRQPQRAAERGAEE
AGRAEETKKEDGEEEEGKQRVRLTGKRHAVEMEEDEDEEDEEEVGEEEKEQKQREEDREE
REVEMEDEGEREKGKDKEEEEEESKAERDDENNEEEQEQSSAAPVVVVEEEKDDKEEEEK
MEVTEAAAVRVQEENEDDDEDKDEEQEIAGGQAVQIQDQEKSPEAGVVVEEEKEVGSESR
KQEVEKENHQESIAQESQEASESIMDVQPQSEEPFGSSKPSEPSEPTAMEQQSSTFETDS
AMELQKSRPEKESPTEPPLMPQPQELKTSPNKEVEETEQGEEQRGRSGGKARPKRSRSRN
RSSSSSSSSSSSSTSSSGSSSSSSGSSSRSSSSASSSSSSSSRSRDRDTGHSRRRRNSDR
ERKKGERGGERGSGGHKSSKSGGSGGRESKGSKDKSSKSDRKRTSSEGSRAGKRSSRGDR
SERSDRDRDRKSDRKEKRR
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggcggtggcggtgcggaatctgcaggatcagctggagaaggcaaaggagagcctgaag
agtgtggacgagaacatacggaaactcactggcagagaccccaacgagctacggccgggt
cagaccaggcgtttgtccatcacaggcccaggtggaggtagggggcgtggcatcggtata
ctgaggcgtggactctctgatggcggtggaggaccgccagccaaacagagggacatcgag
ggggcactcttgaggctggcgggggatcagagagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccggcgttgcagtcatcagtagtagctacc
tccaaggagcgaacgcgccgagatctgatccaagatcagaccatggacgagaagggcaaa
cagaggaatcggcgcatgtttggcctgctgatgggaactctgcagaaatttaaacaggag
tccactgtgtccacagaccggctgaagcgacggcaggagatcgagcagaagctggaggtg
caggcggagcaggaacgtaagaaggtggagagcgagaggagggagctgtttgaggagaga
cgggcgaagcagaccgagctcaggcttctggagcataaagtggagctcgctcagctgcaa
gaggagtggaacgctcacaactccaaaatcataaagttcattcgcaccaagaccaagcca
cccatcttctacctgccgggtcgcatgtgctcagccactcagaagctcctggatgagtcc
cagaaaaaaatgaacgccgtgtttgacgagaggcgtgaagctttcgccgagcacctgaac
aagatggaggctcggcccaggcgtcagccccagcgggctgcggagaggggggcggaggag
gccggccgggccgaagaaacgaagaaggaagatggagaggaggaggagggtaagcagaga
gtaaggctgacaggtaaacgacacgctgtggagatggaggaggatgaggatgaggaggat
gaggaagaggtgggggaggaggagaaggagcagaagcagcgagaggaggatagggaggag
agggaggtggagatggaggatgagggggagcgggagaagggcaaggataaggaggaggaa
gaggaggagagtaaagcagaaagagatgatgagaataatgaggaagagcaggaacagtct
tcagcagcaccagtggtagtggtggaggaggagaaagatgataaggaggaagaggagaaa
atggaagttacagaagcagcagcagtaagggtgcaggaggagaatgaggatgatgatgag
gataaagatgaagagcaggagatagctgggggtcaggcagtgcagatccaggatcaggag
aagagcccagaggcaggagtagtagtagaagaagagaaagaggtaggtagtgagagcagg
aagcaagaagtagagaaggaaaaccatcaggagagcatcgcccaagagtcccaggaagcc
tctgaaagcatcatggacgtccaacctcagtctgaagaacctttcggatcttccaaacct
tccgaaccttcagaaccaactgcaatggagcagcaaagcagcacctttgaaacggatagc
gccatggagctccaaaaatcaaggccagaaaaagaatccccaactgaaccaccactaatg
ccccaacctcaggagctcaaaaccagccccaacaaggaggtggaggagacggagcaaggc
gaggaacagcgcggccgcagcggcggcaaagcccgtccgaaacgcagccggagccgaaac
cggagcagctccagctcctccagcagctcctcgtcgtccaccagctccagcggctccagc
tcgtcttccagcggctccagcagccgcagcagctcctccgcctcgtcttcctcgtcctcc
agctcgcgcagccgcgacagagacaccggccactccaggcgccgcaggaactccgaccgc
gagcgcaagaagggagagagaggcggcgagagaggcagcggagggcacaagtcctccaaa
agtggcggcagtggcgggcgcgagagcaagggctccaaggataagagctcaaagtcggac
aggaaacggacgagctcggaagggagccgggcgggaaagaggtcgtcgcgtggcgaccgg
agcgaacgcagcgaccgcgatcgggatcgcaaatccgatagaaaagaaaagaggcgctag

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