Astyanax mexicanus (Mexican tetra): 103028856
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Entry
103028856 CDS
T05042
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028856 (hnf1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103028856 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103028856
NCBI-ProteinID:
XP_007247197
Ensembl:
ENSAMXG00000005661
UniProt:
A0A8B9H0G8
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Position
12:33247856..33256570
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AA seq
568 aa
AA seq
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MDPGERAMDGGEEQTSTGSVRRLSALQEQLLWSLLGSGLTREVLVQAMGELERERERAGL
DRSDRNDRADGESSEEGEMEYPPPIFRELEKLPPQEAARQRAEVDQLLQEDPWRVAKMIK
CYMQQHNLPQREVVESTGLNQSHLSQHLNKGTPMKNQKRSALYSWYVKKQDEISRQFTNA
SRGMVSGDEAGDEGRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECL
QRGVSPSQLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTLYSSQSASSTAHTLPSS
PTHVLKFPQSAVCESLGSTRSSSVDRTAGGHLVASPVQLEPSHTLLDIQHQKPVSVGGSL
PPVSTLTSLHGTGSPQGLIMASLPSVMSLGDSSLLIGLTSTQPQTVPVINNVGGGFTTLQ
PISFQQQLHAPQQPIAQSLQGHLGPSPFMATMTQLPCHMYSKTDLTSYPSSSLLSQAMVI
ADSNSLGTLTSLTTVRQILSSDPEDQTDTPIQEESLHLQPSSPIPVSSGSLELYSQSQSS
ETHTSHLLASPPGEIDPYIPAQMVSTAQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggagaaagagcaatggacggaggagaagagcaaacatcaacaggaagtgtg
cgcaggctctcggccttgcaggagcagttgctgtggtcactgttaggctccggactgacc
agagaggtgctggtgcaggccatgggagagctggaaagggagagagagcgagccgggctt
gaccgaagtgaccgaaatgatcgtgcggatggagagagttcagaggaaggtgagatggag
tatcctccaccgatcttcagggaactggagaagctgccaccgcaggaggccgccaggcag
agagcagaagttgaccagctgctgcaagaggatccctggcgtgtagctaagatgattaag
tgttacatgcagcagcataacctccctcagagagaggtggttgagtccacaggcctgaac
caatctcacctgtcccaacacctgaataaaggcacacctatgaagaaccagaagcgttct
gccctctacagctggtacgtcaaaaaacaggacgagatcagcaggcagtttacaaatgcc
agccggggtatggtatcaggagatgaggctggagacgagggcaggaagggacggagaaac
cggtttaaatggggtcctgcatcccagcagatccttttccaggcctatgagagacaaaag
aaccccagcaaggaggagagagagggactggtggaggagtgtaacagggcagagtgtctg
cagaggggtgtgtctccatcccagcttgcaggattgggctctaatttggtcactgaggtc
agagtgtataactggtttgcaaaccgacgcaaagaagaggctttccgacacaaactggca
ttggacacactgtatagcagccaatcagcatccagcactgcacacacactcccatcgagc
cccacacacgttctgaagttcccccagtctgctgtgtgtgagagtttggggtcaacaagg
agcagcagtgtggaccggactgcagggggacacctggtggccagtccagtccagctggag
cccagccacacactgctggacatacagcaccagaaaccagtgtcagtgggcggctctctg
ccacctgttagtaccctcacgtctttgcatggcactggttctccacagggtcttattatg
gcctctttacccagtgtcatgagcctgggagactcctcactgcttataggactgacgtcc
actcagccgcagacggttcctgtaatcaataatgtagggggcgggttcaccacacttcag
ccaatctctttccagcagcagctgcacgccccacaacagccaatcgcacagtcactgcag
ggccacctcgggccgagccccttcatggccaccatgacgcaactgccctgccacatgtac
agtaagacagatttgacctcgtacccatcctccagtctcctgtcccaggctatggtcatt
gccgacagcaacagcttagggaccctcactagtctgacaacagtccgacagattctcagt
tcagatcctgaggatcagacagatacgccgatacaagaggagtctctacacctgcagccc
agctcacctataccagtgtcgtcaggcagtttggagctgtactcccaatctcagtccagt
gaaacgcacacctctcacctcctcgcttccccaccaggagaaatcgacccatacatccct
gcacagatggtctcaaccgcacagtga
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