Astyanax mexicanus (Mexican tetra): 103028863
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Entry
103028863 CDS
T05042
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028863 (sox21b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103028863 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103028863
NCBI-ProteinID:
XP_007227779
UniProt:
A0A8B9GLL8
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Position
11:complement(1875200..1877112)
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AA seq
243 aa
AA seq
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MSKSGEHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDE
AKRLRALHMKEHPDYKYRPRRKPKTLLKKEGKFAFPVPYGLAEHEAALKVGAGLGSFPSA
ALSEPFLTSPDKAAAAAAAAAARVFLNPSIPAHPYSFLELGSKMPELSTPSLPYASPPLG
YPGFSGTGAHTHSHPSPGNPGYMIPCGCAAWPSAGLQPPLAYILLPGMGKPPLDPYPAYA
AAL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagtggcgagcacgtgaagcggcccatgaacgccttcatggtgtggtccagg
gctcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggagccgagtggaagctgctgaccgaggccgaaaagaggcccttcatcgacgag
gcgaagcgtctgcgggcgctgcacatgaaggagcaccccgactacaagtaccggccgcgc
cgcaaacccaagactctgctgaagaaggagggaaagtttgcatttcctgttccgtacggc
ttggcggagcacgaggccgctctgaaggtgggtgccgggcttggatcctttccgagtgcc
gccctgtccgagccgttcctgacttcgccggacaaggccgccgctgccgctgctgctgcc
gccgccagagtgttcctgaacccctccatcccggcacatccctactctttcctggagctg
ggctccaaaatgccagaactgtcaacgccctcgctgccctacgcctcgccgccactgggc
tacccggggttctctggcacgggggcacacacgcactcacacccgtcaccgggaaacccg
ggctacatgattccgtgtggctgcgcagcgtggccttccgccggactgcagccgccacta
gcctacatcctgcttcccggcatgggcaaacccccgctggacccctaccccgcttatgct
gccgcactctga
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