Astyanax mexicanus (Mexican tetra): 103028957
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Entry
103028957 CDS
T05042
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028957
Transcription factors [BR:
amex03000
]
Eukaryotic type
Other basic domains
RF-X
103028957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
103028957
NCBI-ProteinID:
XP_049330459
Ensembl:
ENSAMXG00000038850
LinkDB
All DBs
Position
2:complement(51131478..51157104)
Genome browser
AA seq
1567 aa
AA seq
DB search
MADDQQQPGQLQQSPVSGLGSLSTAVPGLQGPEATALQYNKIKNSICKSVQSKVDSILQD
VEKFTDIEKLYLYLKLPSGPSSGNDKRTENQRGSTSPATCDQNSTSSSRTQQMYAFNWIR
NHLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSK
YCYSGLRKKAFVHMPSLPNLDLHKSGDGCELLEPAAQSPSAEDEMRSAACGLVCEWAQKV
LSRQFDSVEELARFLLNSHYIGTKSMAALTVMTGTPTGVKTPTPASAFVPTGEANAFQPQ
VKTLPSPSVDAKQQLQRKIQKKQQEQKLTSPLPSDAQARRAEAGTPGPGSGITSGSPALL
SPQPTIGIVVAAVPSPITVQRNRQLMTSPSPVAAAEGKVLPVNFQVVTQPVKQSPKTPQN
VPASPVGDRLARHRYAQILPKPSATSAITLRSPPTLLITHNSPIKTVMPTQHVSSVNVVK
MTAISLTPNSSSGSSTPTPLRPASAGVSSTLSHEEPSQNQQSQNGSSATLQSATAGRVGH
PATTMISSTTEVKMICEATNDSNLSAGVEKQSTAPGTITGLKNERATKFRASSEPSLLVK
ASPVPERVSRAKSDSATPPSTIIGAAAPCSNNSSESTLYLTVMNQNADVGLSTNGAFSPS
GQSPKSAGLGPKSPRKRSASVLETHAIPVKRVFISQQPLDASNHPKPGLIIAAKKIQRPG
TPARPESAPCKVTLKQSNCLPTQILALSDTPIENTSQTIVTPQSSSQSKHGDTSAGISPA
DIVSCNSTASDQALLQQIVSHQVATAISQEASAVSELKSSLQDYSLQLQAEQKQVTASHL
PLIAQTPEASTQLTLQQDIVDFDGAQASMDYFPFNDDDMTQDSIVEELVQMEEQMKLNSS
LQPYLSSLDIPLQGQSVPQSTILSPHQTGTQFYHSAHSSTTPVHTPTPTPTPTPTPTPTP
TSEMLPGGHSITRESPCSRMAPITPVDGILGGRHTPISTPLSNCSSSVPPSPVECRNPFA
FTPINSNIPGYHDGSVVSSSPVKPMQRPMATHPDKAKMDWINNRYNSTSSSPSISNTNAI
SILPSYQDLVEDHFRKPHAFAIPGQSFQSQSRHQDGHLGRLTTVSPVQQGQQTVENKQES
FAVPAPLDNKTTSGNGGGTFRCRSVSPAVRQRNLSGTTGQNNPAPRSVVSPFNSPLTAEV
LSILSNNQSVVNANSMAQRSQSVPLSIMMQSEMLPIGHQGQPSNSAKITSVLLSKMDADG
DDTVRGLGVNNLPSNYTARMNLTQILETTQAFPGGTAHQTQQIPVCSSPSPFDFQKPGFL
LTTGGEQIAFTSEAQAQSGSTLQQQEQQLQLQDQQLELQDQQLLQDSQLQLQEQTLQLQD
PQLQLQEQTLQLQDQQLHLQDQQLELQDQQLQLQDQQLQLQDQQQLQDDPNLSQQQLLPQ
TSQQDEEQQQQEQLDFNSTVKDLLGEDGLNPSSQLVGQVASELSAVASDFSSEIRLTSDL
SGSINDLNTLDPNLLFDPSQQQDQYEDTTLEELKNDPIFQQICSDTVNSAGFDWLENKDQ
PTVEMLG
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacctgggcagctgcagcagagtcccgtgtccggcctgggc
tctctctccaccgcggtgcctggtctgcaaggccccgaggcgaccgcgctgcagtacaac
aagatcaagaattcaatctgcaaatctgtacaatcaaaagtggacagcattttgcaagat
gttgagaagtttacagatattgaaaaactctacctctaccttaagttgccttctggtcct
agcagtggaaatgacaaaagaactgaaaatcagagggggtctacaagtcctgcaacatgt
gaccagaattccacatcgtccagccggacccaacagatgtatgctttcaactggatcaga
aatcacttagaggagcatcctgagacctcactgccaaaacaagaggtgtatgatgagtac
aagagctattgtgacaatcttggctaccatcctctaagtgctgctgattttggaaagatt
atgaaaaatgtctttccgaacatgaaggcacgccgccttggaatgcgaggaaaatctaaa
tactgttatagtggactgaggaagaaagcctttgtgcatatgccatctttgcccaacctg
gacctgcataaatcaggggatgggtgtgagctgttggagccagctgctcagtctcccagt
gctgaagatgagatgcgttctgcagcctgcggcctagtctgtgaatgggcccagaaagtc
ctgagccgtcagtttgacagtgtggaggagttggcacgatttctgctcaacagccattat
attggcaccaagtccatggctgccctaactgttatgactgggaccccaacaggtgtaaaa
acgcccactcctgcatctgcatttgtgcctactggtgaggccaatgctttccagccccaa
gtgaagactctcccttcaccctcggttgatgccaagcagcagctacagcgaaagatccag
aagaaacagcaggagcagaaactcacatctccactgcccagtgatgcccaagctcgtaga
gctgaagcaggcacaccaggccctggttccggtatcacatctggaagtcctgctttgttg
tccccacagcccacgataggaattgtagtagcggcagtgccaagtcccatcacggtgcaa
aggaatcgacagctgatgacctccccaagtccagtggcagcagctgaagggaaagtccta
ccagtgaatttccaagtggtcacacagcctgttaagcagtcccctaaaactcctcagaat
gttcctgccagtcctgttggtgacaggctagccagacaccgatacgcccagatcctacct
aaaccctctgccacaagcgccatcactcttcgatcacccccgacacttctcatcactcac
aacagccccatcaaaacagtgatgcccactcagcacgtcagctcagtgaatgttgtcaag
atgacggctatatcattaacacctaacagtagcagtggcagcagcacaccaacaccctta
cgacctgcctcagctggtgtaagtagcactctttcccatgaagagcctagccaaaaccag
caatctcagaatggcagctcagccactcttcagtcagctacagctggaagagttggccac
cctgccaccaccatgatttcctccactactgaagtcaaaatgatttgtgaagctacgaat
gacagtaacttgtctgctggtgttgaaaagcagagtaccgcacccgggactatcactggg
ctaaagaacgagagggccactaaatttagggcttccagtgaaccttctcttcttgtaaag
gcatccccagtgcctgaacgagtcagtagggccaaaagtgactctgcaacgcctcccagt
acaatcataggggcagctgccccctgcagcaataacagcagtgaaagtactttgtatttg
accgtaatgaatcagaatgcagatgttggattgtcaaccaatggtgcgttttccccctct
ggccagtcaccaaaaagtgctggtcttggtccaaaaagtcctagaaagcgctctgcttct
gttcttgagacccatgcaattcctgttaagagggtgtttatatctcagcaacctttggat
gccagcaaccatcctaaacctggtcttataatcgctgcaaagaagatacaaaggccagga
actcctgcaagaccagaaagtgctccatgcaaagtgacactaaaacagagtaactgccta
ccaacacaaattttagccctttcagatacacccattgaaaacacctctcagactattgtg
actcctcagagctcttcacagtccaagcacggggacacctctgctggaattagccctgct
gatatagtctcttgtaatagcacagcatctgatcaagctttattgcaacaaattgtgagc
caccaagtcgccactgccatttctcaggaggcatctgctgtgagtgagctaaagagttcc
ttacaggactattctctacagctacaggcagaacaaaagcaggtaacagctagccatctt
ccattgatagcccagacacctgaagcatctactcagttgaccctccagcaggatattgtt
gactttgatggagctcaagcgagcatggactatttcccttttaatgatgatgacatgact
caagatagtatagtggaagagctggtgcagatggaggagcaaatgaagctgaatagcagt
ctgcagccatatcttagttctttagatatacctttacaaggccagtcagttcctcaaagc
actattctttctccccaccagacaggtacgcagttctaccactctgcacatagcagcacc
acaccagtccacactcctacacccacaccaactccgacaccaaccccaactccaaccccg
acctcggaaatgttgccaggtgggcacagtataacaagagagagtccgtgttctagaatg
gctcctattaccccagttgatggtattttaggtggtcgacatacacctataagcactcca
ttgtccaactgtagtagtagtgttccaccaagtccagttgagtgccgcaatccctttgca
tttactcctattaattccaacatacctggttaccatgatggcagtgtagtatctagtagc
ccagttaaacccatgcagaggcccatggccactcatccagacaaggctaaaatggattgg
atcaacaatcgatataacagcacctcaagttccccatcaatttcaaacacgaatgccatt
agcatccttcctagctatcaggatctggttgaggaccacttccgtaaaccccacgctttt
gccataccagggcagtcatttcagtcccagtcaagacaccaggatggacatttgggcaga
ttgacaactgtgtcacctgttcagcaaggccagcaaacagttgaaaacaagcaggaaagc
tttgcggtcccagcaccactagacaacaaaacaacatctgggaatggaggtggaactttt
aggtgccgtagtgtcagtcctgcagtacggcagcgcaatcttagtggcaccacagggcag
aataatcctgcgccaagatctgttgtttcacctttcaattcccctttgaccgctgaggtt
cttagcattctctccaacaaccagtcagtggtaaatgccaacagcatggcccaaaggagc
cagtcagtaccgttgagcatcatgatgcagtctgagatgttgccaattggccaccagggc
cagccgagcaacagtgccaaaatcaccagtgtgctcctcagcaagatggatgcagacggg
gacgacacagtgcgtgggttgggtgtcaacaacttgccttccaattacacagcgcggatg
aacctcacccaaatcctggaaactacgcaggcctttcctggaggcacagcccatcaaaca
caacagatacccgtctgctcaagcccttcaccattcgacttccagaagcctggtttcctt
ctaaccactgggggtgaacagattgctttcaccagtgaggcccaagcacaatcaggctct
acgctgcaacagcaagagcaacagctccaactacaggatcaacagctggaactgcaagat
caacaactgttgcaagattcacagttgcaactccaggaacaaacgctgcagcttcaagat
ccacagttgcaactccaggagcaaacgctgcaactgcaggaccaacagttgcatctccag
gaccaacagctggaattacaagaccaacagttgcaactgcaggaccaacagttgcaacta
caggaccaacaacagctacaagatgatccgaacctcagtcaacagcaactgctgcctcaa
acctcacaacaggatgaggagcaacagcagcaggagcagctggacttcaatagcactgtc
aaggatctattgggggaggatggactcaaccccagctcgcagctggttgggcaggtggca
tcagaactcagcgcagtcgcgtcagacttctccagtgaaatccgtttgacctctgatctt
tccggtagcatcaacgacctgaacactttagatcccaatcttctgtttgacccgagtcag
caacaggaccaatatgaagacaccacactggaagagctgaagaacgacccaatatttcag
cagatatgcagcgacactgtgaactctgctggatttgactggttggagaacaaagaccag
ccaacagtagaaatgttgggttag
DBGET
integrated database retrieval system