Astyanax mexicanus (Mexican tetra): 103029074
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Entry
103029074 CDS
T05042
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103029074 (rims1b)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
103029074 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
103029074 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
IBR
Motif
Other DBs
NCBI-GeneID:
103029074
NCBI-ProteinID:
XP_049325635
Ensembl:
ENSAMXG00000000491
LinkDB
All DBs
Position
21:complement(32258759..32379504)
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AA seq
1658 aa
AA seq
DB search
MSASVGPQGGPRPPTAPAATMPDMPDLSHLTEEERRIILAVMARQKEEEEKEQAMLKTLH
QQFESYKEQVQRIGAETKRQQTIHKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGG
RVSLRSNNVMWVCNLCRKQQEILTKSGEWFSPGPRGRPLSLGAIVPGPEADGDKKLRSRS
QVPAGTNLSAADPQGPNARPADRAKGADTMPASRARSEPAREKKRPVSLHEQNGKVIGRG
ERRPGPGRLSAQASEDRIPGERREGRRLEKGHSHEYDHPDGEPAHPDQRRRKEEEDRERQ
RREEEYQTRYRSDPNLARYPIKPQKEEQEMRMHAKVSKMRQERHHSDMAINEVGLAQDGG
ETPGGRLGRRVVPNEDRKALLENHRAYSVDRTVGGIGGGGGGSVIAGGGGHGPLQKQGHS
GPRMGPAGPPDLRDGQDWGPKDHLEPGSVALLHKTKREKAAESFRKDSSLSSDQSECLRP
PPPRAYRPKRGLNKRQMSISSSEEEGGSTPEYTSCEDVEIESVSEKGDWDCHPLDPAVWH
HPVTWQPSKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKMTETGRLGAFITKVKKGS
LADIVGHLRAGDEVLQWNGKALPGATKKEVYNIILESQAAPQVEIVVSRPIGCIHRILSK
NFLRKVYKAYQDTPRIPQTSHPPLESTGSSSIDESQKMDRPSISVMSPTSPGMLRDLPQV
LPGQLSVKLWYDKVGHQLIVNVLQARELPPRPDGRPRNPYVKMYFLPDRGDKSKRRTKTV
KKSSEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRAQEEESDFLGEILIELETALLDDQ
PHWYKLQSHDVSSLPLPQPSPYLPRRHVHGESPSKKLQRSHRIIETDYDDAITVVSSAAE
RNSRDRDRSSTLTVPDRPAAVQHRSRSVSPHREDQCRARSRPSHVPMQRSLDEIHQNRHH
SHSPTLYHKSQQEHRSIDSDYDYSEDSEVLEMHRSIRGGSAECLHTNRNLARHCNTLPPK
MPLLVNGIHKDIYSSTLPACLKSKSSRRIEVGGVAPRSAVPQRVLRFTDEVSTSDLQPSL
DRVRSASTTCLRPETSFHSPDRERPVGSLDRPACPKPNKKSIDNDRIQPTSILRGSRWRR
DAPIRPFGQTSLGGSCPSSPRLLDRGHPQGSPLSVRRGRQLPQLPAKSSSIEQDHVSNKP
EEKALAVEERARQLSQMRVPSYRPGSSASTGHDQEMELKNKRDMYKRSCDNMSARSSDSD
MSDVSAISRASSASRLSSASYMSVQSERPHGRLRSKSLESCKGEEKKERRISWGVNSPTQ
RRSLGKRRFSEELKRRRHTVAGDEDVSRQVRSSAGRSMLKSTSVSGEINTSERTDGSQSD
TALGTVSGGSKKRRGSLNARFVAIVGNRRSRSTSQISPTEASNKKSKGGGTTIQRSQETG
MAVELQRNMSRQPSRESNNGSMTSYNSEGSPIFPAVRVETQFSDFLDGLGPAQLVGRQTL
ATPSIGDIQIGMVNKKGQLEVEVIRARGLIQKPGSKSLPAPYVKVYLLDNGAYVAKKKTK
IARKTLEPLYQQTLQFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLASNVIG
WYKLFPPSSLVDPTLASLTRRASQSSLDSSSTPAAARS
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttcggtagggccccaaggcggccctcgcccacccacggcgccggcggcgacc
atgccagacatgccggacttgagccacctgaccgaggaggagcgccggatcatcctggcc
gtgatggctcgccagaaggaggaggaggagaaggagcaagccatgctgaagactcttcat
cagcagtttgagagctataaggagcaggtccagcggatcggggcggagaccaaacgccag
cagacaatccacaaggacgacgcccccacctgcgggatctgccgcaagaccaagtttgcc
gacggctgcggtcacctctgctcctactgccagaccaagttctgcgctcgctgtgggggg
agagtctctctacgctccaacaatgtgatgtgggtatgcaacctgtgcaggaagcagcag
gagatcctcactaagtctggggaatggttctcgccggggccccggggccggcctctgagc
ctgggagctatagtgcctggccctgaggccgacggggacaagaagctgcgctccaggtcc
caggtccccgccggcaccaacctcagcgccgccgacccccaggggcccaacgccaggcca
gccgaccgggccaagggagcagacaccatgccggcctcacgcgcccggagcgaacccgcc
agagagaaaaagaggcctgtgtccctacacgagcagaacggcaaggtgattggccgaggc
gagagaaggccaggaccaggcaggttgtcggcacaagcttcggaggatcgcatcccagga
gaacggcgggaaggccggcgtctggagaaaggccactcgcacgaatacgaccacccagac
ggtgaacctgcccaccctgaccagcggcggagaaaggaggaagaagatcgagagcgccag
cgacgcgaggaggagtaccagacgcgataccgcagcgaccccaacctggcaaggtacccc
atcaaacctcaaaaagaagagcaggagatgcggatgcacgccaaagtgtccaagatgcga
caagagcgtcaccacagcgacatggccatcaacgaggtgggactggctcaggatggcggc
gagacccccggcggccggttaggcaggagggtggtccctaacgaggatcgcaaggcactt
ttagaaaaccaccgagcgtactctgtggacaggaccgtggggggtattggtggtggtggt
ggtggtagtgttattgctggtggcgggggacatggacccctccagaaacagggtcacagt
ggtcctcgtatgggccccgcgggccccccagacctcagggacggacaggactggggcccc
aaggatcacctagagcccggatcagtggctttactgcacaaaaccaagcgagagaaggcg
gcagaaagcttccggaaagattcctccctcagctccgaccagtcggagtgtctccggccc
cctccgcccagggcttaccggcccaaacgtggcctcaacaagaggcagatgtccattagt
agctcagaggaggaaggagggtctactccggagtataccagctgcgaagatgtggagatc
gagagcgtcagcgagaaaggtgactgggactgccatcctctagatccagctgtgtggcat
catcctgttacctggcagccgtccaaagagggggatcatttgatcggccgcatcactctg
agcaagcgctcggccatgccccgcgaagccggctcgctgctggggctaaaggtggtcggt
gggaagatgacggagacgggtcgtctgggagctttcatcaccaaagtaaagaaaggaagt
ctggcggatatcgtggggcatttacgagcaggtgacgaggtgctgcagtggaacgggaag
gcgttgcctggagcaaccaagaaggaagtgtacaacatcatcctagagtcacaggctgct
cctcaagtagagatagtggtttccagaccgattggatgtatccatcgtattctttccaaa
aacttcttgagaaaggtgtataaagcttatcaggacacaccgagaattccacagacatca
catcctcctcttgaatcaactggttccagctctatagatgaatcccagaagatggaccgc
ccctccatctccgtcatgtcccccaccagtccgggaatgttgagagaccttcctcaggtt
ctacccggccagctttcagtaaaactgtggtatgacaaggttggccatcaacttattgtc
aacgttttacaagccagagaacttcctcctcgaccagacggacggccacggaacccttat
gtcaagatgtacttccttcctgatcggggtgataagagcaagaggaggacaaagacggtg
aagaagagctcagaacccaagtggaaccagacgtttctgtactctcacgttcaccgccgg
gacttcagagagcgcatgctggagatcaccgtgtgggaccaaccccgagctcaggaggag
gagagcgacttcctgggagagatcctgatagagctggagacggcgctgctggacgatcag
ccgcactggtataagctgcagtctcacgacgtgtcctccctccccctgccccagccctcc
ccctacctcccccgcagacacgtccacggagagagccccagcaagaagctacagagatct
caccgcatcattgagactgattatgatgatgctattacggtagtgtcttcagcagcggag
aggaactccagagacagagaccggtccagtaccctgaccgtcccggaccgtcctgcggcc
gtccagcaccgatcccgctccgtctcgccccacagagaggaccagtgtagagcccggtcc
agaccctcacatgtacccatgcagagaagtcttgatgaaattcatcagaaccggcatcat
tctcactcgcccacgctctaccacaaatctcagcaggagcacagatctatagactcggac
tatgactattctgaggacagtgaggtcctggagatgcacagatcaatccgaggcgggagc
gctgagtgcctgcacacaaacaggaacttagctaggcactgcaatactttgcccccaaag
atgcccctgttagtgaatggcattcacaaagacatttacagctccacgcttcccgcatgc
ctaaagagtaaatcttcacggagaatagaagtgggcggagtcgcccctcgtagtgccgtc
ccacagcgagtgctcaggtttacagatgaggtcagcactagtgaccttcagccatcgctg
gacagagttagaagtgccagtacaacatgtctgaggccagagaccagcttccactcccca
gaccgagaaaggccggtgggcagcttggatagacctgcctgcccaaaacctaacaagaaa
agcatagacaatgacaggatccagcccacctccatcctgcggggcagcaggtggaggaga
gacgcccccatccggcccttcggccagaccagtctgggggggtcgtgccccagttcaccc
cgccttcttgacagaggacatcctcaagggtctcccttgtcggtgcgcaggggcagacaa
ctgccacagcttccagctaagagcagcagtatagagcaagaccatgtcagtaataaacct
gaggagaaagcgttggcagtagaggagcgagctcgtcagctgagtcagatgcgagttccc
tcctataggccgggatcctccgccagcacaggccacgaccaagagatggagctaaagaac
aagagagacatgtataagaggagctgtgataacatgtcggcgcggtcgtcggacagtgat
atgagtgatgtgtcggccatctccagagccagcagtgcctcacgcctcagcagcgccagc
tacatgtctgtccaatcagagagaccgcacggacgcctcaggtcaaagtctctggagagc
tgtaaaggggaggagaaaaaggagaggcgtatctcgtggggcgtgaacagccccacccag
aggaggagtctggggaagaggcgcttctcagaggagctgaagcgccggcgccacactgtg
gccggagatgaagatgtcagtcggcaggtgcggtcgtcggcgggtcgcagcatgctgaag
agcaccagtgtgagcggtgagatcaacacgtcggagcggacggacggcagccaatcagac
acggctctgggcacggtgagcggcgggagcaagaagcggcgcggcagcctcaacgctcgc
ttcgtcgccatcgtgggcaacagacgcagcaggagcacctcccagatcagcccgacggag
gcatctaataagaagtctaaaggaggcgggacgaccatccagcggagtcaggagacgggc
atggccgtggagctgcagcgcaacatgagccggcagcccagccgcgagtccaacaacggc
agcatgaccagctacaactccgagggaagtccgatcttcccggccgtgagggtggagact
cagttcagcgacttcttagacgggctgggtcctgcacagctggttggccgacaaacctta
gccacgccttctattggggacatccagatcggcatggtgaataagaagggtcagctggag
gtggaggtgatccgagcccggggcctgatccaaaaaccaggatccaaatcactccctgct
ccttatgttaaggtgtacctgctggataacggggcgtacgtagccaaaaagaaaacgaag
attgcacgaaaaacgctggagcctctgtaccagcagactcttcagttcgaggagagccca
cagggtaaagtgttacaggtgatcgtctggggagactacggaagaatggaccacaaatcc
ttcatgggagtagcacaaatcctattggaggagctggacctggccagcaacgtgattggc
tggtacaaactgtttccgccctcctccttagtagaccccactctggcctcgctcactcga
cgggcttcccagtcgtctctggacagttcctccacgcctgcagcggctcggtcgtag
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