KEGG   Astyanax mexicanus (Mexican tetra): 103029084
Entry
103029084         CDS       T05042                                 
Symbol
her6
Name
(RefSeq) hairy-related 6
  KO
K06054  hairy and enhancer of split 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03460  Fanconi anemia pathway
amex04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103029084 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    103029084 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103029084 (her6)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103029084 (her6)
Transcription factors [BR:amex03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    103029084 (her6)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     103029084 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH Spectrin_1st_PEPL bHLH_NCOA
Other DBs
NCBI-GeneID: 103029084
NCBI-ProteinID: XP_007249126
Ensembl: ENSAMXG00000012278
UniProt: A0A8B9H6M8 W5KYG4
LinkDB
Position
5:19838948..19840954
AA seq 270 aa
MPADMMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNAEVRTRLLGHLANCMTQINAMNYPTQHQIAAGHPHPTFAQPMVQIPGG
TPQANVLPLSGVPCKSGSSSNLSPEATKVYGGFQLVPATDGQFAFLIPNAAFAPSGPVIP
VYANNSSTPVPAAVSPGAPSVTSDSVWRPW
NT seq 813 nt   +upstreamnt  +downstreamnt
atgccggctgacatgatggaaaaaaactcttcatccccggtggccgcgaccccggcgagc
atgaacaccacgccggataagcccaagacagcctccgagcacagaaagtcgtccaaaccc
attatggagaaaaggagacgagccagaatcaacgaaagcttgggacaactcaaaacgcta
atcctggatgctctgaaaaaagatagctccagacactcgaaactggagaaggcggatatc
ctggagatgactgtgaagcacctccgaaacatgcagcgagcacaaatgactgctgctctg
aacacagatcccaccgttcttggaaagtacagggctggattcagcgagtgcatgaacgag
gttacccgattcctgtccacctgcgaaggggttaatgccgaggtcaggacgcggctgctg
ggtcacttagccaactgcatgacgcagatcaacgccatgaactaccccacgcagcaccag
atagctgctggccacccgcacccgaccttcgcccagcccatggttcagatccccggtgga
acaccacaggccaacgtgctgcctctcagtggagtaccctgcaaaagtgggtcctcatcc
aacttgtcacccgaagccaccaaggtgtacggaggattccagctcgtaccagcaacagat
ggacagtttgcctttttgattcccaacgccgcgtttgcacccagtggtcctgtaatccca
gtatatgccaacaactccagcacacccgttccagcggcagtatctccaggcgcaccttca
gtcacctcagactctgtgtggcggccttggtag

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