Astyanax mexicanus (Mexican tetra): 103029084
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Entry
103029084 CDS
T05042
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03460
Fanconi anemia pathway
amex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103029084 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103029084 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103029084 (her6)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103029084 (her6)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
103029084 (her6)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
103029084 (her6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
103029084
NCBI-ProteinID:
XP_007249126
Ensembl:
ENSAMXG00000012278
UniProt:
A0A8B9H6M8
W5KYG4
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All DBs
Position
5:19838948..19840954
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AA seq
270 aa
AA seq
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MPADMMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNAEVRTRLLGHLANCMTQINAMNYPTQHQIAAGHPHPTFAQPMVQIPGG
TPQANVLPLSGVPCKSGSSSNLSPEATKVYGGFQLVPATDGQFAFLIPNAAFAPSGPVIP
VYANNSSTPVPAAVSPGAPSVTSDSVWRPW
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgacatgatggaaaaaaactcttcatccccggtggccgcgaccccggcgagc
atgaacaccacgccggataagcccaagacagcctccgagcacagaaagtcgtccaaaccc
attatggagaaaaggagacgagccagaatcaacgaaagcttgggacaactcaaaacgcta
atcctggatgctctgaaaaaagatagctccagacactcgaaactggagaaggcggatatc
ctggagatgactgtgaagcacctccgaaacatgcagcgagcacaaatgactgctgctctg
aacacagatcccaccgttcttggaaagtacagggctggattcagcgagtgcatgaacgag
gttacccgattcctgtccacctgcgaaggggttaatgccgaggtcaggacgcggctgctg
ggtcacttagccaactgcatgacgcagatcaacgccatgaactaccccacgcagcaccag
atagctgctggccacccgcacccgaccttcgcccagcccatggttcagatccccggtgga
acaccacaggccaacgtgctgcctctcagtggagtaccctgcaaaagtgggtcctcatcc
aacttgtcacccgaagccaccaaggtgtacggaggattccagctcgtaccagcaacagat
ggacagtttgcctttttgattcccaacgccgcgtttgcacccagtggtcctgtaatccca
gtatatgccaacaactccagcacacccgttccagcggcagtatctccaggcgcaccttca
gtcacctcagactctgtgtggcggccttggtag
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