Astyanax mexicanus (Mexican tetra): 103029112
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Entry
103029112 CDS
T05042
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04136
Autophagy - other
amex04140
Autophagy - animal
amex04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
103029112 (atg4b)
04140 Autophagy - animal
103029112 (atg4b)
04136 Autophagy - other
103029112 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103029112 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103029112 (atg4b)
03029 Mitochondrial biogenesis [BR:
amex03029
]
103029112 (atg4b)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103029112 (atg4b)
Membrane trafficking [BR:
amex04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103029112 (atg4b)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103029112 (atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
103029112
NCBI-ProteinID:
XP_022531169
Ensembl:
ENSAMXG00000004343
LinkDB
All DBs
Position
5
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETPEPVWILGKQFNALKEKDDILSDITSRMWFTYRKNFQP
IGGTGPTSDTGWGCMLRCGQMILAEALIRTHLGRDWRWVAGQRQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLTVFDTWSRLAIHVAMDNTVVIEEIK
KLCMPWLDFERGACAEPGGPPEMNGCLEGACALAEEALWKPLVLLIPLRLGLSDINEAYI
ETLKQCFMMPQSLGVIGGKPNSAHYFIGFVGEELIYLDPHTTQPSVEPCESSHIQDDSYH
CQHPPCRMHICELDPSIAAGFFCQTEDDFDDWCAHIRKLSSCKGGLPMFELVDSQPSHLL
NTEVLNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagccactctgacgtacgacacactgcgctttggggagtttgaggatttccca
gagacgccggagcctgtctggatcctggggaaacagttcaatgcactaaaggagaaggat
gatatcctgtcagacattacttcacgcatgtggttcacctacagaaaaaacttccagcca
atcggaggaactggacctacatctgacactggctggggctgtatgctgcggtgcgggcag
atgatccttgcggaagctttgatccgcacacacctgggtcgagactggagatgggtagca
ggccagagacagcgagaggagtacatcagcatcctcaatgcctttatagacaagaaagac
agctactattccatccaccagatcgctcagatgggagtcggggaaggcaagtccataggc
cagtggtacggcccaaatacggtggcacaggtactcaagaagttgacagtgtttgacaca
tggagtcggctggccattcacgtggctatggacaatactgtggtcattgaggaaatcaag
aagttgtgtatgccgtggttggattttgagaggggggcgtgtgcggagccgggcggaccc
cctgagatgaatgggtgtctggaaggggcgtgtgcactggcagaggaggctctgtggaaa
ccactggttctgctcatccccctgcgactgggcctcagcgacatcaacgaggcctacatc
gagaccctgaagcaatgtttcatgatgcctcagtctttaggagtcattggggggaagccc
aacagtgcacactacttcatcggctttgtcggtgaggagttgatttacctggacccccac
accactcagccatctgtggagccgtgtgaaagcagccatatccaggacgactcttaccac
tgccagcaccctccctgccgcatgcatatctgtgagcttgacccctctatagctgctggt
ttcttctgccaaacggaggacgactttgatgactggtgtgctcatattcgaaaattatcg
agctgtaaaggaggtctgcccatgtttgagctggtagacagtcagccgtcacatctactc
aacactgaagtacttaacctcactccagatttctcggactcggaccgactcgagcgattc
ttcgattctgaagatgaagagtttgagatcctgtctttgtga
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