Astyanax mexicanus (Mexican tetra): 103029145
Help
Entry
103029145 CDS
T05042
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103029145 (cfap43)
Cilium and associated proteins [BR:
amex03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
103029145 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_VPS8
CFAP43_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
103029145
NCBI-ProteinID:
XP_022540288
LinkDB
All DBs
Position
7:complement(42716341..42739598)
Genome browser
AA seq
1671 aa
AA seq
DB search
MAVLESLEVRWVQGITSSNVEFVDKNTACYICGNYIVFLNIKTRMRNMLQSPGSGIGSFT
ANSFSRTLALSEQKLHPSIFVYSYPELSLRCELKGTAKLAYTVLALSDAGPYLACCSSLP
DYTITVWNWESEAPVCTHPLTEEDISTLAFNPVNWQQICAANSRSVTVWNIEKSNDVHIM
QPSVVDLPAADGSAVVREVISSHGSNGKLTYYGPQMPTSAIAGLSGDRAENFVPQGQVKS
RLCPSAICWSASSQLYVGTREGFLLLINSETLLVTVLYKTLIEGNPSNELVDCMGLLMQE
GSFQSLALCSNGIFTTGTDCVLRNIQIKGNQVEVVKTLAMEEAASFLCCSPDYETLLLSS
PTGCIYRYKPGLADKPVKVLDVLNGDFVAAAPLYTENNICVSVRESGELQLWSLDAGICI
ASISLQTNVTSLACCPIAQYVAVGTVTGHVLFVELTRKEEPRLVHSVHLYQVPVSHLVFD
QGGNVLITGASEPHIFVLDARPSKAFEVIGYTVTIGATVSLSTQFVKESKQIKVLVLCDG
EKEERKNKEHKEGNVLLLLSISLQQVTVSGSCVDLHGALREDVLHSCVYETPDYLSSCVL
GTRKVFGYCQQKKVLQIFQLPELASKSSSTEEPLQLTPEKETEGHPLGPAIVNLSPHQDW
LASVGRDGLLRICDVSSLEIYVQHQCHSSWLGGVCSVSFTPDSQTVITTGLRDGSLVCSK
LRLKTSGNSKANTATQYRLSMVESFEELILSENPVLSRMTDLELQAPHTPHTAEVSESSH
VTNKDESNMSQPSASSSHFTWLDEKLDAVLKEESQQFAGNRESIRNGLKELRETIQAMMQ
ENESLPDMEKLELHEFNLDVEEQKRLQAEGEQEVDRVRKEIELENLAKRYQREVLKKEFW
DQMKVKGKAIKAFHSEHEVQNYPMKERTAKELEELHRVETIRQTELSESNLQQETSEEKS
KPPVEGEEKDEAEGDAAQSLALTGSLSPQCGGFNPYLYSQISIQTREQKLNQITLLQDVI
YKVKTAFNEEFEAVYKQKEQEISRVRDRNKRITDIMTELEVQEVLWEPTLTDNERPERAL
TVSDSEIKVEKYLTPEQMEREEQQRKEEEQRQLATKGDNIRDRALVYMMDGVLELKKEDI
LRMEVPQPEFMTKPEVQWTEEERRSYKEYEKKTKELREEQEKYRKILEAEIKKLQTSIKD
ATQGFDGTLSKLFEKKVKSDMAVHQEELKIANLAYSLMIEEEILNREKHLTYKLEMARIL
KNDMGEGLKRHREDVEEFQKIYDIAVADDKLLDKGFRKEFADVPRYLVDQLYKLYKRRPR
VQRFRTQTDSTSPSSIRPLLGQAAAEGSLDMMKAMEELDAPEHMPEDLDLPVWERFCLAR
RAKVESEQQVKMKALTLAEMQAFLQNRTDEDENLQMEIKTLNNELNGLREERMRFCRDPM
VQIVIKQGQVELESGDFIADYSDAVLLHRSVVEELNSVIRALGEQKIAGMIERKEIRKGI
IQQEWEHKRMTMQMEDLSNKAKDIQRLHLNQEIQEYLSESDYDNRMSKQVSALEKTSTLQ
EKTYQKKIENCKKLIKQLNRQAVLKKEKCAALDLQVVSMEVAVAERRKIYEATATEESQE
DEVKQRYQDILRRKKLLNLAEAQTEELAALRAEVERLRRKTFPALTPLKPN
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggctgttctggagagtttggaagtgaggtgggttcaaggaatcaccagcagcaatgtt
gaatttgtggataagaacacagcctgctacatatgtgggaattacatagtttttctcaac
ataaagacaagaatgaggaatatgcttcagtctccaggcagtggcattggatcctttaca
gcaaacagcttttccaggactctagcactttctgaacagaaacttcatccatccatattt
gtttacagttaccctgagctttccttacgatgtgaacttaaaggcacagctaaactggct
tacacagtgttggcactgagtgatgcaggtccatatttagcctgctgctcgtctctacct
gattacaccattacagtgtggaactgggaaagtgaagctccagtttgtacccatccactg
actgaagaggacatttcaactctagcttttaatccagttaactggcaacaaatctgtgca
gcgaactcaagatctgtaacagtctggaatattgagaaaagtaatgatgttcatataatg
caacccagtgtagttgacctccctgcagctgatggttctgctgttgtgcgagaagtgatc
tcctctcatggctccaatgggaaattgacatactatggtcctcagatgccaacttcagct
attgcgggtctcagtggtgaccgggcggaaaactttgtgccccagggtcaagtgaaatca
agactttgcccaagtgccatctgctggtcggcctcctcacagctgtatgtgggaaccaga
gaaggttttctgctgctaataaactctgaaactctgcttgtcacggttctctacaagaca
cttattgagggaaatccttcaaatgaactagtcgactgtatgggtctgcttatgcaagaa
ggcagtttccagagcctggcactgtgcagtaatgggatctttactacaggaactgattgt
gttttacgaaacatccagattaaagggaatcaggttgaggttgtaaagacgttggctatg
gaggaagcagcctccttcctgtgctgttcacctgattatgaaacactgctgctctcttcc
cccactggatgcatatacagatacaaaccagggcttgcagacaaacctgtgaaggtgctg
gatgttctgaatggagactttgtggctgctgctccattatacactgaaaataacatctgc
gtgtcagtcagagagtctggagagctgcagctgtggtcactggatgcaggaatctgtatt
gcttccatctctttgcagacaaatgtgaccagcttggcgtgttgcccgattgcccagtat
gttgcagtgggtacagtgactgggcatgttctgtttgtggaactcacaagaaaggaggaa
cctcgactggttcatagtgttcacctctaccaggtgcctgtcagtcatttagtgtttgat
caaggaggcaatgtcttaatcacaggagcatcagagcctcacatatttgtgctggatgca
cgaccatcaaaagcgtttgaggtgattgggtacacagtaacaataggtgccactgtgagc
ctgtccacccagtttgtaaaagagagcaaacagataaaggtgctggtgctttgtgatgga
gaaaaagaggaaagaaaaaacaaggaacataaagaggggaatgtactgctgctgctctca
atatctctgcagcaggtcacagtttcaggaagctgtgtggacctgcatggtgcccttcgt
gaagatgttcttcacagctgtgtgtatgagactccagactatttgtcttcatgtgttctg
ggtactagaaaagtctttggctattgtcagcaaaagaaagtcctgcagatattccaactt
ccagagcttgcaagtaaatcatccagcacagaggaacctcttcagctgactccagagaaa
gagacagaagggcatcctctgggccctgcgattgtgaatctatcaccccaccaggactgg
ctggcctctgtcggcagagatggactgctacgcatctgtgatgtctccagtctggaaata
tatgtgcaacatcagtgccactcttcctggctgggaggagtttgctctgtgtcttttaca
cctgacagtcaaacagtcatcaccactggccttcgagatggctctctggtctgtagtaag
ctcaggttaaagacatctggaaacagtaaagcaaacacagctacccagtacagactgtcc
atggtggaatcctttgaggagttaatattatctgaaaaccctgtgctcagccgcatgact
gacttggaattacaggctcctcacacacctcacacagctgaggtcagtgaaagcagtcac
gtaaccaacaaggatgagagcaatatgagtcagccttctgcatcttcatcccatttcaca
tggctggatgagaagctagatgcggtactcaaagaggagagccagcagtttgcaggaaac
agggagagcatcaggaatggccttaaggaactgagagaaacaattcaggctatgatgcag
gagaatgagtctctgccagacatggagaagctggagctgcatgagtttaacctggacgtg
gaggagcagaagagactgcaggctgagggagagcaggaggttgacagggtacgaaaggag
attgagctggaaaatctggctaagcgctatcaacgtgaggttcttaagaaagaattttgg
gaccagatgaaagtcaaggggaaagccattaaggccttccacagtgagcatgaagtgcag
aattaccctatgaaggaacgcacagcaaaggagctggaagagcttcatcgggtggagact
atccgacagactgaactatctgaatcaaatcttcaacaagagacttccgaagagaaaagc
aagcctccagtagagggagaggagaaggatgaggcagaaggagatgcagcacagagctta
gctttaacaggcagcctgagtcctcaatgtgggggttttaacccttacttgtacagccaa
atcagcattcagaccagagagcagaaacttaatcagatcaccctgctacaggatgttatc
tacaaagtgaaaactgcttttaatgaagaatttgaggctgtgtataagcagaaggagcag
gagatcagccgtgtaagagacaggaacaagcgcatcactgacattatgactgagctggag
gtgcaggaggttctgtgggagccaactcttactgacaatgaaagaccagagagagcactg
accgtcagtgactctgagataaaggtagagaaatatctgacccctgagcagatggagaga
gaggagcagcagagaaaagaagaggagcagaggcagctcgcaacaaagggggacaatatc
agagacagagcgctggtttatatgatggatggggtgcttgagcttaagaaagaggacatt
ctaagaatggaagtgccacagcctgaattcatgacaaagccagaggtacagtggacagag
gaggagagaagaagctacaaagaatatgagaaaaagactaaggagctcagagaagagcag
gagaaataccgaaagatcttggaggcagagataaaaaaactgcagacatccattaaagat
gccactcagggttttgatggaacactcagtaagctgtttgaaaagaaggtgaaatcagac
atggctgtacatcaggaggagctaaagattgccaatttagcctattccttaatgattgag
gaagagatcctgaacagagagaaacatctgacctacaaactggagatggcaagaattctt
aagaatgacatgggggaaggtcttaaaagacacagagaggatgtggaggagtttcagaag
atatatgacatcgctgtagctgatgataaacttcttgacaaaggatttcgcaaagagttt
gctgatgttcccagatatttggttgaccagctctacaagctttacaagcgcagacccagg
gtgcagaggtttaggactcagactgacagcacaagcccgtcctccatcaggcctctgtta
ggccaagcagcagcagagggatccctggatatgatgaaggccatggaggagttggacgct
ccagagcacatgccggaggatctggacttacctgtctgggaaagattctgcttagccagg
agagctaaagtggagagtgaacagcaggtgaagatgaaggcattgaccttagcagagatg
caggcttttctacagaaccgaacagatgaggatgagaacctgcaaatggaaataaagact
ctaaataatgagctcaatggcttgcgtgaagagagaatgaggttctgccgggaccctatg
gtgcagattgtgataaagcagggccaggttgagctggagtctggagacttcattgcagac
tactctgatgctgtgctgctccaccgcagtgttgttgaggaactgaacagcgtaattagg
gctttaggagagcagaagattgcaggcatgatagagcgcaaagaaatccgtaaggggatc
atccagcaggaatgggagcacaagaggatgactatgcagatggaggatctcagcaacaaa
gccaaagacattcaaagacttcatctcaatcaggagattcaagagtacctgagtgagtca
gactatgacaacagaatgtcaaagcaggtgtctgctctagagaagacctcaacattacaa
gagaagacttatcagaagaaaattgagaactgtaagaagctgataaagcagctgaacaga
caggctgtgctgaagaaggagaagtgtgcagctcttgacctgcaggtggtcagcatggaa
gtggctgttgcagaaagaagaaaaatctacgaagcaacagcaacagaggaaagccaagaa
gatgaagtaaagcagcgctatcaggacatcctgcggaggaagaagcttttgaatttggcc
gaagcacagaccgaggaactggctgcactgagagctgaggtggaacgcctgcggagaaag
acattccctgctcttactccacttaaacccaactga
DBGET
integrated database retrieval system
