Astyanax mexicanus (Mexican tetra): 103029206
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Entry
103029206 CDS
T05042
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03020
RNA polymerase
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103029206 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
103029206 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103029206 (polr2d)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103029206 (polr2d)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
103029206 (polr2d)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103029206 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
103029206
NCBI-ProteinID:
XP_022533845
Ensembl:
ENSAMXG00000008954
UniProt:
W5KNP1
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All DBs
Position
8:11617010..11619517
Genome browser
AA seq
143 aa
AA seq
DB search
MASGAAGAASVGDVEEDASQLLFPKEFENSETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLE
GRFEDEELQQILDDIQTKRSFQY
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagcggcgggagcagcgagtgtgggggatgtggaggaggacgcgtctcag
ctgctcttccctaaagaatttgaaaattcagagacgctcctgaactctgaggttcacatg
cttcttgagcaccgaaagcagcagaacgagagcgcggaggacgagcaggagctttctgaa
gtcttcatgaagaccctgaactacacggctcgctttagtcgcttcaagaaccgcgagacg
atcgccagcgtgcgcagcttactcctacaaaagaagctacataagtttgaattggcaagt
ttagccaatctgtgtccagaggcagcagaagaagcaaaagcactcattccaagcttggaa
ggtcgatttgaggacgaggagttgcagcagattctggatgatattcagaccaaacggagc
tttcagtattga
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