KEGG   Astyanax mexicanus (Mexican tetra): 103029206
Entry
103029206         CDS       T05042                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03020  RNA polymerase
amex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103029206 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103029206 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amex03021]
    103029206 (polr2d)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103029206 (polr2d)
Transcription machinery [BR:amex03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103029206 (polr2d)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103029206 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 103029206
NCBI-ProteinID: XP_022533845
Ensembl: ENSAMXG00000008954
UniProt: W5KNP1
LinkDB
Position
8:11617010..11619517
AA seq 143 aa
MASGAAGAASVGDVEEDASQLLFPKEFENSETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLE
GRFEDEELQQILDDIQTKRSFQY
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcgagcggagcggcgggagcagcgagtgtgggggatgtggaggaggacgcgtctcag
ctgctcttccctaaagaatttgaaaattcagagacgctcctgaactctgaggttcacatg
cttcttgagcaccgaaagcagcagaacgagagcgcggaggacgagcaggagctttctgaa
gtcttcatgaagaccctgaactacacggctcgctttagtcgcttcaagaaccgcgagacg
atcgccagcgtgcgcagcttactcctacaaaagaagctacataagtttgaattggcaagt
ttagccaatctgtgtccagaggcagcagaagaagcaaaagcactcattccaagcttggaa
ggtcgatttgaggacgaggagttgcagcagattctggatgatattcagaccaaacggagc
tttcagtattga

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