Astyanax mexicanus (Mexican tetra): 103029220
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Entry
103029220 CDS
T05042
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103029220 (khdc4)
Spliceosome [BR:
amex03041
]
Complex B
Other components
Prp19-related factors
103029220 (khdc4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
103029220
NCBI-ProteinID:
XP_049336194
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Position
6
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AA seq
584 aa
AA seq
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MSFNVNHGGGRRSKWDQPGPGPGVEGDAAPTGALDAAAAVAAKINAMLVAKGKLKPSQIG
TPGTVDKTTGSGGKSMPVAKAKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRVSGAAV
STRGRYMTAEEKAKAMPSDRPLYLHVQGQTRELVDKAVNRIKELITNGVVKAATSSSTSY
NGATVTVYHPPGPPPATLPPAGHKPHFTGGMHYVQDKLFVGLEHAIQGFSVKERVEGPGC
SFLQHIQAETGAKVFLRGRGSGCLEPASGREAFEPMYIYISHPKPEGLAAAKTLCENLLQ
TVHAEYSRYLTQMSAVMPTQGFIQPPAVNGIAPQAPYYTPAGFQPTYPPPVPPPQPIPAP
YTLPLPAVAPGTQTPIPPPSAQYPIAPAPANLPPQNLQPATFPLVAPALPKPAASAAQTP
APQKRRFTEEVPDETESGLLGYQHGPIHMTNLGAGFTLGSAEASGPPLAGPCGPPQERDS
RQLMPPPALPVNTVVRALKTEERRTLPALLEPQVKRMKTGLVAYSGDSSDEEEDHSSLKL
GGSGNMGPGSSPPGWPAGAYRCPTPPPPRPKTQTSQPMPFWMAP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaacgtgaatcacggcggagggcgacggagtaaatgggaccagccaggtcca
gggccaggggtcgagggggatgcagctcccacaggtgcactggatgccgctgctgctgtg
gctgccaaaatcaacgcaatgctggtggccaagggcaagctgaagccctcacagattggt
actcctgggacagttgataagacaacaggttctggtgggaagtccatgcctgtagcaaaa
gcaaaggatgatctagtggtagcagaggtagaaataaatgatgtaccactcacctgtcgg
aaccttctcacccgtggacagactcaggatgagatcagcagagtcagtggtgctgctgta
tccacgaggggccgctacatgacagcagaagaaaaggccaaagccatgcccagtgaccgc
cctctctatctacatgtacaaggacaaactagagaacttgtcgacaaggcagtaaacagg
ataaaagagctcatcactaatggcgtagtaaaagctgccaccagctccagcacttcatat
aacggagccactgtcacggtctatcatccccctggtccccctcctgcaacactgccccct
gcaggacacaaaccacactttactggtgggatgcactatgtacaggataagctctttgtg
ggtttagaacatgctatccagggtttctcagtgaaggagcgtgtggaaggtccgggctgc
tcattcctgcagcacatacaggccgagacaggagcgaaagtcttcttgaggggaaggggg
tcaggctgcctggaacctgcatctgggagagaggcctttgagcctatgtacatctacatc
agtcaccccaaaccagagggacttgctgcagccaaaacgctgtgtgaaaatcttttgcaa
acagttcatgcagaatactctcgatatttgactcagatgagtgcagttatgcccacgcaa
ggtttcattcagccacctgctgtgaatgggattgcccctcaggccccatattacacccct
gcaggtttccagcccacctaccctccccctgtaccccctccacaacccattcctgctccc
tacacactgcccctgccagcagtggcaccaggaacacaaactccaataccaccccctagt
gctcagtatccaattgcacctgctccagcaaacttaccgccacagaaccttcagcctgcc
actttcccacttgttgccccagcccttcctaaaccagcagcttctgcagcccagactcca
gcacctcagaaacgccgtttcacagaagaggtgcctgatgaaacagaaagcggcctgctg
ggttaccagcatggacccattcatatgactaatttaggtgcaggcttcactttgggcagc
gctgaggcatcaggacccccacttgcaggtccctgtgggcctccccaggagagggacagt
cggcagctgatgccacctccagcactgcctgtgaatactgtagttagagcgctgaagaca
gaggagagaaggactttgccagccttgctggagccacaggtgaagcgtatgaagacaggg
ctggtcgcatactctggcgattcctctgatgaagaggaagatcacagttctctcaagtta
ggtggttcaggtaacatgggtccaggttcttctcccccaggatggcctgctggagcatac
cgctgccccacaccacctccacctcggcccaaaacacagacatcacagcccatgcccttt
tggatggcaccttga
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