Astyanax mexicanus (Mexican tetra): 103029269
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Entry
103029269 CDS
T05042
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103029269 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103029269 (uimc1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
103029269 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Rad50_zn_hook
zf-C2H2_11
zf-C2H2_jaz
UIM_2
zf-met
UIM
Motif
Other DBs
NCBI-GeneID:
103029269
NCBI-ProteinID:
XP_007244496
Ensembl:
ENSAMXG00000006912
UniProt:
A0A8B9HZV5
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All DBs
Position
17:17415313..17428345
Genome browser
AA seq
994 aa
AA seq
DB search
MPRRKRTTAQNEGQRKCRRADNKEEDTLVISDSDNEEEEEAGSKVTSREARWQDRDTRAQ
MQDMTEEEMLDLAMRLSKQEANSAAQRQQLEDDDMQKAIAESLHVSQRQAWEENSETASS
VAKQSQDPSTVKARMRRKLYFPSKREAERAMDEDDTAAAESGEDSMQDSKSLLPMPDLSQ
KTLSQSPPPSPSLLSVPSTSTQKHQSPQLKSSNEQVLRVPNEQDSPEDVLSQGSETQCSA
AFLKQCFVRVEKNLTSSGRTSDNSPTTQNISLSLTCPDRSQLTQKQSPSPVKSPVFAKMD
PKESAALSADKGALCISKKMFTDKVCTPKKEEEEEDETCKDSSSHKKQVNDSREHQKRLS
LCRKAQPSSCSLVPDEEEDDIGAKQETVHPEQLKDGSSRRTSFSAELEKVPNSEDMPLHA
DSKSLEEFTSHMVLHLSDDDDEEDEEEEKIAVPSPVFHQECVPHAGSSKLSPTQHCISPP
TASTSPLCSRAQDSDLQNICIRKKCTSKTAYPAESIQQERGDQKKSACDSRSTHVMDEKS
GGFVSYYWGVPFCPRGQNPDDYTRVILSQLEVYEKSLKEAQHQLLHKAEWGLPLFPCRAE
RPFIRRMKRHRAPQLLEEEEEEPEKEENEQNKADEEDEDGEERADFCAASGEAAENKQNE
TYVVVSSPETQIEIVENSPLPFRQHEDSDAAKLPSCRKSSSHDPSEDTQIEQPDEHNKTQ
DENYDVESTMCPETQMSEDNTPELMVTSPVQPQLQEETEVMEVDEEAAEDERMEQEQAEE
EQQQQREPVPPQNQRVECPMCTRFFPISKIEVHAAYCDGTTEEAEQEEEPSQVPTLRSRN
RQPEMGVTSPKSTENKSEQRHKCYLCQRFFTSEEMYSRHVDKCLKQKQSKSNQGNGLLSA
LHKAECVDDDDSEAGPSDTMIKNHGVPAESSEVAESGGDEDGSTSAFYVSSSPIKSFTPI
SEATDCLIDFQNQYSDRTSRRLGRKRKLKLFKMA
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaggaaacgaaccacagctcaaaatgaagggcagagaaagtgtcgccgtgct
gacaataaggaggaagacacgttggtcatctcggactccgacaacgaggaggaagaagaa
gctggcagcaaagtgacatcaagggaagcccgatggcaagatagggataccagagcccaa
atgcaagacatgactgaggaagagatgttggacctggctatgcgactaagtaaacaagag
gcgaatagtgctgcccaaagacagcagctggaagatgacgacatgcagaaagccatcgca
gaaagtcttcatgtcagccagaggcaagcctgggaagaaaactctgagactgccagctct
gtggcaaagcaaagtcaggacccatccactgtgaaggcacgcatgagacgcaagctctac
ttccccagcaagagggaggcggaaagggcaatggatgaggatgatactgctgcggctgag
agtggggaggacagtatgcaggacagtaagtcactgctgccaatgcctgatctgtctcag
aagaccttgtcacaatccccaccaccaagtccatctctgctgtctgtgccttcgacatct
acacaaaagcaccagtcaccacagttgaagagctccaatgaacaggttcttagggttcca
aatgaacaggactctccagaagacgtgctatcacaaggctctgagacccagtgttctgct
gcttttctaaagcagtgctttgtaagagtggaaaagaacttgacgagttctggtagaact
tcggacaattcaccaacgacacagaatatctctctaagcttaacctgtcctgatagatct
caactcacccaaaagcagagcccgtcgcctgtgaaaagccctgtgtttgctaagatggac
cctaaagaaagtgctgcattgtctgcagacaagggtgcattgtgtatctccaaaaaaatg
ttcacagacaaagtatgcacaccgaaaaaagaagaagaagaggaagacgaaacgtgtaaa
gactcttcaagccataaaaaacaagttaatgacagcagggaacaccaaaaacgcctttct
ctctgtagaaaagctcagccatcatcctgtagtttagtgcctgacgaggaagaagatgat
attggtgcaaaacaggaaactgtccatccagaacagctgaaggatggctccagtcgcaga
accagcttcagtgctgagcttgagaaagtgccaaactctgaggatatgcctttgcatgca
gacagcaaatccttggaggagtttaccagtcacatggtcctacatttgtcagatgatgat
gacgaggaagacgaagaggaagagaagattgctgttccaagtcctgtcttccaccaggag
tgtgttccacatgcaggcagctctaagctttctccaacccaacactgcatctccccacct
actgcctcaacttccccactctgttcccgtgcacaagactctgatctgcagaatatttgc
atccgaaagaaatgtacttcaaaaactgcctatccagctgagtctattcagcaagagcgt
ggagaccagaagaaatctgcctgtgattctagatcaacacatgtgatggacgagaaaagt
ggcggttttgtgtcttattactggggtgttcctttttgcccaagagggcaaaacccagat
gattacaccagagtcattctcagtcagttggaggtgtatgagaagagcctgaaagaagcc
cagcaccagctcttgcacaaagctgagtggggactaccactgttcccttgccgagcagag
aggccgtttatcaggagaatgaagcgccaccgagcaccccagcttctggaagaggaggaa
gaggagccagaaaaagaggagaatgagcaaaataaagcagatgaagaagatgaggatgga
gaggagagagcagatttctgtgcagcttcaggagaagcagcagagaataaacagaatgaa
acctatgttgtggtgtcctctcctgagacacagatcgagattgtggaaaattctccattg
ccctttaggcaacacgaggattcggatgctgccaaacttcccagttgtaggaagtctagt
tcacatgacccttctgaagacactcagatcgaacagcctgatgagcacaataagactcaa
gatgaaaattatgatgtggagagcaccatgtgtccagaaacccagatgtctgaagacaat
acaccagaactgatggtgactagccctgttcagccacagttacaagaggagactgaggtg
atggaggtagatgaagaagctgctgaagatgagagaatggaacaggagcaggcagaggag
gagcagcagcagcagagggagccagttcctcctcagaatcagagggtggaatgccccatg
tgcactcgcttctttccaatcagcaagattgaggtgcatgctgcttactgtgatggcacc
acagaggaagcagaacaagaggaagagccctcacaagtgcccactctgcgcagcaggaac
agacaacctgagatgggagtcacctcacctaaatctacagagaacaaatctgagcagcga
cacaaatgttacttgtgtcagaggtttttcacatctgaggaaatgtacagccgtcatgtg
gacaagtgccttaagcagaaacaatccaaaagcaatcagggaaatggcttgctctctgca
ttacataaggcagaatgtgtagatgatgacgatagtgaagctggaccctctgacactatg
atcaaaaatcatggagtccctgcagagtcatcagaggttgctgaatctggtggagacgaa
gatggttccacatctgctttttacgtcagctcatcccctatcaaatccttcactcccata
tccgaagctacagattgcctcatagactttcaaaaccaatactcagacagaacgagcaga
agactggggaggaagaggaaacttaagctgtttaagatggcataa
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