Astyanax mexicanus (Mexican tetra): 103029310
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Entry
103029310 CDS
T05042
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103029310 (caprin2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
103029310 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
103029310
NCBI-ProteinID:
XP_007233749
Ensembl:
ENSAMXG00000007266
UniProt:
A0A8B9KZP0
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All DBs
Position
2:complement(37682435..37693946)
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AA seq
972 aa
AA seq
DB search
MSDLQSLRPDTPPSPPEERARKSRTMVLLSPPQALDALAPSELIEEGDIELDGSPKSPQA
FTALQLALNPSATVYHGYETYIEEGLICLKHKIRNIEKKKLKLEGYRLRLNNGETLNKDQ
LNAVEKYEEVVHNLIFARDLQKTFCDLTQDLLKAQKKAVRREQTLKASTEQRRLCIMLQV
QYVLRSLQRDDIRKNFCNAREHAKFLSTQEVENLLDLASLLGCKRDERMSLEDQMEQASF
VYLNLLDGKDKPVAGSTYKHFKEKLLRLVDCGFFDHLPPPQKCTSGVLDGLKPNASTPCS
LPALVSLNSNEVPSRKFLNRRYSPEAVLTGNSRGEERDVTPPPNWRAEFLALKEQEPPDS
WDMELSDAPRPSQTVLQKPWKGAAGFIPKTPVIMKNPAADSKQKRQRKTKGSQESKCDAE
VEVFNSPSSLAKDPTLRRQQLDNLMDQITGSFSFIQDSLLDGEASPTNGRSLRLHLSPGS
SPLAQREQKKPLADELTQNQHSTPLHARVVSGDGKIPLINGNQTLDSCGLELHTEDTPNA
KQDEGFTSPPLYCRESCISLPLEDKNSKQTGKLCNGEMPTPVSAQSFTTPPSRRSLTMAN
ASPFDSMHSVFSGEPPITVSSELKSESGFSGSVCLSYSTASSLSYTTASTQTPPEFSLPQ
DDLQMESAYLSESDLSGTSQVYSSPGPPSALQPQSSLSQPPYYPRNTLRGTARGSRGLPH
SYRSPGSSRGDYEVLRVNMRAPGGGYIGQTHRDPGSLLYNSRENGYQLNHKRTGGPAAQR
NSSAAGWSDSSQVSSPDRDCTYLLDSGHGDSLSISPLEVPVAGQGTHTLLPVHVYPVSQQ
LRVAFSAARTANFAPGTLDQPIAFDLLHSNLGDVFDASSGRFSCPAAGTYVFIFHILKLA
VNVPLYINLMRNEEVMVSAYANDGAPDHETASNHAVIQLYHGDQVWLRLHRGAIYGSSWK
YSTFSGFLLYQD
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctgcagtcactgcggcccgacacgccaccttcaccaccagaggagcgcgcg
agaaagagtcgaaccatggttctcctgtccccacctcaggccttggatgccctggctccc
tcagagctcattgaagaaggggacatagagctggatggcagccccaagtcccctcaagcc
ttcacagccctgcagcttgccctcaacccctccgccacggtctaccacggttatgaaacc
tacatagaggaaggcctcatctgtctgaagcataagattcgcaacattgagaaaaagaag
ctgaagctggaaggatacagactacgactaaataatggggagacgctgaataaagaccaa
ctgaatgctgtggagaagtatgaagaagttgtccacaaccttatatttgctagagacttg
cagaagaccttctgtgatctcacacaagatctcctgaaggctcaaaagaaggctgtgcgg
cgtgaacagactctaaaggcatcgacagagcagaggcggttgtgtataatgctgcaggtg
caatatgtcctccgcagccttcagagggacgatatcaggaagaacttctgcaatgcacgt
gaacatgccaaattcctgtccacacaggaagtggagaacctgctagacttggcttcatta
ctgggatgtaagagggacgagcgaatgagtttagaggatcagatggagcaggcttctttt
gtttatttaaatctactggatggaaaagacaaaccagttgctgggtcaacatataagcat
ttcaaggagaagctgctgagattggtggactgtggcttctttgatcacctcccaccacct
caaaaatgcacaagtggggtcttggatggcctgaagcccaatgcttccacaccctgcagc
cttcctgcactggtcagtttgaactccaatgaagtgccttcacgaaagtttctaaacaga
cgctactcacctgaggcagtcctcactggtaacagtcgtggggaagaaagggacgtgact
ccaccaccgaattggagggcagaatttttggccctgaaggaacaagaacctccagattct
tgggatatggagctttctgatgctccaaggccttcccagacagtattacagaaaccttgg
aaaggagcagcaggatttataccaaaaaccccagttattatgaagaaccctgctgctgac
tccaaacagaaacggcagaggaaaactaaaggaagccaggaatcaaagtgtgatgctgaa
gtggaggtatttaactccccatcttccctagccaaagaccccactctgcgcagacagcag
ctggacaacctgatggatcagatcacaggctcctttagcttcatacaggactctttgctg
gatggagaggcttctcccactaatggcaggtccttgaggcttcatctgtcccctggctct
agtcctcttgcacagagagagcagaagaagcctctggctgatgagctgactcagaatcaa
cattctactccactgcatgcacgtgtggtctctggagatggcaaaatccctctgatcaat
ggcaatcagactctagacagttgtggcttggagttacacactgaagatactcccaatgcc
aaacaagatgaaggcttcacctctccacctctttactgcagagagtcctgcatctctcta
cctctggaggacaagaactctaaacagacaggaaagctttgtaatggagaaatgccaact
cctgtctcagcacagtccttcaccaccccgcccagcagacgatctctcaccatggctaat
gcttctccctttgacagcatgcattctgtgttcagtggggagcctcccataacagtgagt
tcagagctgaagtctgaaagtggcttttcaggatccgtgtgtctcagctatagtacagca
agcagtctgagctacactactgccagcacgcagaccccaccggagttcagcctgccccaa
gacgatctgcaaatggagagtgcgtacttatcggaaagtgatctcagtgggaccagtcaa
gtttattcgtctccaggcccaccctctgcccttcagcctcagtccagcctcagccagccc
ccgtattacccccgtaacacactcagaggtacggcacgtggcagcaggggccttccacac
tcctaccgctcaccagggtcctcaagaggtgattatgaggtcctcagggtgaatatgcgt
gcccctggtggaggctacattggccagacccacagagatcctggatcattattgtataat
tcacgggaaaatggttatcagctgaaccataaacgaactggagggccagcagctcaaagg
aacagctctgctgcaggttggagtgactcttctcaggtgagcagtccagatcgggattgc
acatacctgctggactctggccacggtgactccctctccatctcacccctggaggtgcca
gtggctggtcagggtacacacaccctactgcctgtgcacgtctatccagtgtcccagcag
ctccgcgtggccttctcagctgcccgcaccgccaattttgcccctggcactctggatcaa
ccaattgcctttgatttgctgcacagcaacctgggagatgtttttgatgcctcctccgga
cggttttcgtgtccggctgcgggcacctacgtcttcatcttccacatcctcaagctggca
gtcaacgtgccgctttacatcaacctcatgcgcaatgaggaagtgatggtgtctgcttac
gccaacgacggtgcgccagaccacgagactgccagcaaccacgctgtgatccagctgtac
cacggtgaccaggtgtggctacgtctccaccgcggcgccatctatggcagcagctggaag
tacagcaccttctcaggctttctgctgtaccaggactga
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